HEADER SIGNALING PROTEIN 27-JUN-11 2LEZ TITLE SOLUTION NMR STRUCTURE OF N-TERMINAL DOMAIN OF SALMONELLA EFFECTOR TITLE 2 PROTEIN PIPB2. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) TARGET TITLE 3 STT318A COMPND MOL_ID: 1; COMPND 2 MOLECULE: SECRETED EFFECTOR PROTEIN PIPB2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SEQUENCE DATABASE RESIDUES 17-161; COMPND 5 SYNONYM: TYPE III EFFECTOR PIPB2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR SOURCE 3 TYPHIMURIUM; SOURCE 4 ORGANISM_TAXID: 90371; SOURCE 5 STRAIN: LT2; SOURCE 6 GENE: PIPB2, STM2780; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: P15TV LIC KEYWDS STRUCTURAL GENOMICS, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, NESG, KEYWDS 2 BACTERIAL EFFECTOR, VIRULENCE FACTOR, SIGNALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.LEMAK,A.YEE,S.HOULISTON,M.GARCIA,C.DANIELS,A.SAVCHENKO, AUTHOR 2 C.ARROWSMITH,G.T.MONTELIONE,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM AUTHOR 3 (NESG) REVDAT 1 27-JUL-11 2LEZ 0 JRNL AUTH A.LEMAK,A.YEE,S.HOULISTON,M.GARCIA,C.DANIELS,A.SAVCHENKO, JRNL AUTH 2 G.T.MONTELIONE,C.ARROWSMITH JRNL TITL NMR SOLUTION STRUCTURE OF N-TERMINAL DOMAIN OF SALMONELLA JRNL TITL 2 EFFECTOR PROTEIN PIPB2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LEZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUL-11. REMARK 100 THE RCSB ID CODE IS RCSB102310. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 300 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-13C; U-15N] PROTEIN, REMARK 210 10 MM TRIS, 300 MM SODIUM REMARK 210 CHLORIDE, 10 UM ZNSO4, 10 MM DTT, REMARK 210 0.01 % NAN3, 10 MM BENZAMIDINE, REMARK 210 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCO; 3D HNCA; 3D CBCA(CO)NH; REMARK 210 3D HBHA(CO)NH; 3D HCCH-TOCSY; 3D REMARK 210 (H)CCH-TOCSY; 3D 1H-15N NOESY; 3D REMARK 210 1H-13C NOESY ALIPHATIC; 3D 1H-13C REMARK 210 NOESY AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, SPARKY, FMC, TALOS, REMARK 210 PSVS, CYANA REMARK 210 METHOD USED : RESTRAINED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 PHE A 137 REMARK 465 SER A 138 REMARK 465 LEU A 139 REMARK 465 PRO A 140 REMARK 465 GLN A 141 REMARK 465 ASP A 142 REMARK 465 SER A 143 REMARK 465 VAL A 144 REMARK 465 ILE A 145 REMARK 465 LEU A 146 REMARK 465 THR A 147 REMARK 465 ALA A 148 REMARK 465 GLN A 149 REMARK 465 GLY A 150 REMARK 465 GLY A 151 REMARK 465 MET A 152 REMARK 465 ASN A 153 REMARK 465 LEU A 154 REMARK 465 LYS A 155 REMARK 465 GLY A 156 REMARK 465 ALA A 157 REMARK 465 VAL A 158 REMARK 465 LEU A 159 REMARK 465 THR A 160 REMARK 465 GLY A 161 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE ARG A 72 HA PHE A 133 1.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ARG A 48 -81.14 -105.48 REMARK 500 1 ASP A 71 -77.06 -143.21 REMARK 500 1 PRO A 75 108.14 -59.66 REMARK 500 1 LYS A 110 75.80 -161.80 REMARK 500 2 ARG A 48 -83.57 -87.49 REMARK 500 2 GLU A 51 -62.01 -92.13 REMARK 500 2 ASP A 71 -78.32 -151.81 REMARK 500 2 PRO A 75 103.96 -55.90 REMARK 500 2 LYS A 110 76.54 -167.62 REMARK 500 3 THR A 42 -76.08 -109.28 REMARK 500 3 ASP A 71 -77.63 -151.54 REMARK 500 3 LYS A 110 84.17 -167.79 REMARK 500 4 THR A 42 -67.41 -95.63 REMARK 500 4 ARG A 48 -82.17 -77.45 REMARK 500 4 ASP A 71 -79.32 -150.23 REMARK 500 4 PRO A 75 108.31 -55.45 REMARK 500 4 LYS A 110 88.50 -166.31 REMARK 500 5 ARG A 47 35.30 -84.42 REMARK 500 5 ASP A 71 -76.12 -140.64 REMARK 500 5 PRO A 75 106.20 -56.89 REMARK 500 5 LYS A 110 77.82 -167.73 REMARK 500 5 SER A 114 97.53 -165.16 REMARK 500 6 ASP A 71 -76.09 -151.98 REMARK 500 6 LYS A 110 89.86 -160.86 REMARK 500 7 THR A 42 -67.12 -93.41 REMARK 500 7 ARG A 48 -83.51 -84.21 REMARK 500 7 ASP A 71 -74.03 -143.61 REMARK 500 7 SER A 114 99.14 -160.77 REMARK 500 8 ARG A 48 -71.47 -69.11 REMARK 500 8 ASP A 71 -75.79 -151.84 REMARK 500 8 LYS A 110 81.22 -159.50 REMARK 500 8 SER A 114 98.18 -163.02 REMARK 500 9 ARG A 47 -9.87 -140.18 REMARK 500 9 ASP A 71 -73.08 -146.65 REMARK 500 9 LYS A 110 76.80 -158.43 REMARK 500 10 THR A 42 -75.58 -110.63 REMARK 500 10 ARG A 48 -76.84 -56.72 REMARK 500 10 ASP A 71 -73.84 -151.37 REMARK 500 10 ARG A 72 149.04 -172.60 REMARK 500 11 THR A 42 -70.15 -94.48 REMARK 500 11 ASP A 71 -76.45 -153.66 REMARK 500 12 GLU A 51 -63.54 -92.67 REMARK 500 12 ASP A 71 -78.06 -142.06 REMARK 500 12 LYS A 110 100.70 -163.37 REMARK 500 13 ASP A 71 -75.55 -136.54 REMARK 500 13 LEU A 82 74.76 -103.52 REMARK 500 13 LYS A 110 89.71 -153.81 REMARK 500 13 SER A 114 98.05 -162.54 REMARK 500 14 ARG A 48 -77.52 -107.50 REMARK 500 14 ASP A 71 -75.42 -148.68 REMARK 500 REMARK 500 THIS ENTRY HAS 78 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17734 RELATED DB: BMRB REMARK 900 RELATED ID: STT318A RELATED DB: TARGETDB DBREF 2LEZ A 17 161 UNP Q8ZMM8 PIPB2_SALTY 17 161 SEQRES 1 A 145 GLY ALA GLY THR SER ALA ALA MET ARG GLN ALA THR SER SEQRES 2 A 145 PRO LYS THR ILE LEU GLU TYR ILE ILE ASN PHE PHE THR SEQRES 3 A 145 CYS GLY GLY ILE ARG ARG ARG ASN GLU THR GLN TYR GLN SEQRES 4 A 145 GLU LEU ILE GLU THR MET ALA GLU THR LEU LYS SER THR SEQRES 5 A 145 MET PRO ASP ARG GLY ALA PRO LEU PRO GLU ASN ILE ILE SEQRES 6 A 145 LEU ASP ASP MET ASP GLY CYS ARG VAL GLU PHE ASN LEU SEQRES 7 A 145 PRO GLY GLU ASN ASN GLU ALA GLY GLN VAL ILE VAL ARG SEQRES 8 A 145 VAL SER LYS GLY ASP HIS SER GLU THR ARG GLU ILE PRO SEQRES 9 A 145 LEU ALA SER PHE GLU LYS ILE CYS ARG ALA LEU LEU PHE SEQRES 10 A 145 ARG CYS GLU PHE SER LEU PRO GLN ASP SER VAL ILE LEU SEQRES 11 A 145 THR ALA GLN GLY GLY MET ASN LEU LYS GLY ALA VAL LEU SEQRES 12 A 145 THR GLY HELIX 1 1 THR A 20 GLN A 26 1 7 HELIX 2 2 SER A 29 GLY A 44 1 16 HELIX 3 3 ARG A 49 MET A 69 1 21 HELIX 4 4 LEU A 121 GLU A 136 1 16 SHEET 1 A 4 ASN A 79 MET A 85 0 SHEET 2 A 4 CYS A 88 ASN A 93 -1 O VAL A 90 N LEU A 82 SHEET 3 A 4 GLN A 103 LYS A 110 -1 O ILE A 105 N ASN A 93 SHEET 4 A 4 HIS A 113 PRO A 120 -1 O GLU A 115 N VAL A 108 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1