HEADER SIGNALING PROTEIN 28-JUN-11 2LF3 TITLE SOLUTION NMR STRUCTURE OF HOPPMAL_281_385 FROM PSEUDOMONAS SYRINGAE TITLE 2 PV. MACULICOLA STR. ES4326, MIDWEST CENTER FOR STRUCTURAL GENOMICS TITLE 3 TARGET APC40104.5 AND NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET TITLE 4 PST2A COMPND MOL_ID: 1; COMPND 2 MOLECULE: EFFECTOR PROTEIN HOPAB3; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SEQUENCE DATABASE RESIDUES 281-385; COMPND 5 SYNONYM: AVIRULENCE PROTEIN HOPPMAL; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS SYRINGAE PV. MACULICOLA; SOURCE 3 ORGANISM_TAXID: 59511; SOURCE 4 GENE: HOPAB3, HOPPMAL; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: P15TV LIC KEYWDS TYPE III EFFECTOR, STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, KEYWDS 3 NESG, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, ONTARIO CENTRE KEYWDS 4 FOR STRUCTURAL PROTEOMICS, OCSP, SIGNALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR B.WU,A.YEE,S.HOULISTON,A.SEMESI,M.GARCIA,A.U.SINGER,A.SAVCHENKO, AUTHOR 2 G.T.MONTELIONE,A.JOACHIMIAK,C.H.ARROWSMITH,NORTHEAST STRUCTURAL AUTHOR 3 GENOMICS CONSORTIUM (NESG),MIDWEST CENTER FOR STRUCTURAL GENOMICS AUTHOR 4 (MCSG),ONTARIO CENTRE FOR STRUCTURAL PROTEOMICS (OCSP) REVDAT 5 14-JUN-23 2LF3 1 REMARK SEQADV REVDAT 4 22-FEB-12 2LF3 1 KEYWDS REVDAT 3 25-JAN-12 2LF3 1 JRNL REVDAT 2 11-JAN-12 2LF3 1 JRNL REVDAT 1 13-JUL-11 2LF3 0 JRNL AUTH A.U.SINGER,B.WU,A.YEE,S.HOULISTON,X.XU,H.CUI,T.SKARINA, JRNL AUTH 2 M.GARCIA,A.SEMESI,C.H.ARROWSMITH,A.SAVCHENKO JRNL TITL STRUCTURAL ANALYSIS OF HOPPMAL REVEALS THE PRESENCE OF A JRNL TITL 2 SECOND ADAPTOR DOMAIN COMMON TO THE HOPAB FAMILY OF JRNL TITL 3 PSEUDOMONAS SYRINGAE TYPE III EFFECTORS. JRNL REF BIOCHEMISTRY V. 51 1 2012 JRNL REFN ISSN 0006-2960 JRNL PMID 22191472 JRNL DOI 10.1021/BI2013883 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE 2.3, CNS REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE), BRUNGER, ADAMS, CLORE, GROS, NILGES AND REMARK 3 READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LF3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUL-11. REMARK 100 THE DEPOSITION ID IS D_1000102314. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 300 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.3 MM [U-100% 13C; U-100% 15N] REMARK 210 HOPPMAL_281_385, 10 MM [U-100% REMARK 210 2H] TRIS, 300 MM SODIUM CHLORIDE, REMARK 210 10 UM ZINC SULPHATE, 10 MM [U- REMARK 210 100% 2H] DTT, 0.01 % NAN3, 10 MM REMARK 210 BENZAMIDINE, 1 X INHIBITOR REMARK 210 COCKTAIL, 90% H2O/10% D2O; 1 MM REMARK 210 [U-100% 13C; U-100% 15N] HOPPMAL, REMARK 210 _281_385, 10 MM [U-100% 2H] TRIS REMARK 210 300 MM SODIUM CHLORIDE, 10 UM REMARK 210 ZINC SULPHATE, 10 MM [U-100% 2H] REMARK 210 DTT, 0.01 % NAN3, 10 MM REMARK 210 BENZAMIDINE, 1 X INHIBITOR REMARK 210 COCKTAIL, 90% H2O/10% D2O; 0.2 REMARK 210 MM [U-7% 13C; U-100% 15N] REMARK 210 HOPPMAL_281_385, 10 MM [U-100% REMARK 210 2H] TRIS, 300 MM SODIUM CHLORIDE, REMARK 210 10 UM ZINC SULPHATE, 10 MM [U- REMARK 210 100% 2H] DTT, 0.01 % NAN3, 10 MM REMARK 210 BENZAMIDINE, 1 X INHIBITOR REMARK 210 COCKTAIL, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCO; 3D CBCA(CO)NH; 3D REMARK 210 HBHA(CO)NH; 3D HNCA; 3D HCCH- REMARK 210 TOCSY; 3D CCH-TOCSY; 3D 1H-15N REMARK 210 NOESY; 3D 1H-13C NOESY; 3D 1H- REMARK 210 13C NOESY AROMATIC; 2D 1H-13C REMARK 210 HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : MDDGUI 1.0, SPARKY 3.95, FMCGUI REMARK 210 2.4, CYANA 3.0, AUTOSTRUCTURE, REMARK 210 PSVS, FAWN REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLN A 279 REMARK 465 GLY A 280 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 286 -41.64 -149.04 REMARK 500 1 ARG A 287 -51.48 77.42 REMARK 500 1 ASN A 288 73.98 62.46 REMARK 500 1 ASN A 300 -75.40 44.60 REMARK 500 1 ARG A 305 178.61 58.37 REMARK 500 1 ASN A 306 87.28 -151.30 REMARK 500 1 ARG A 307 117.14 -176.57 REMARK 500 1 VAL A 338 -67.93 -90.26 REMARK 500 1 PRO A 358 39.57 -80.85 REMARK 500 2 ASP A 286 -71.99 -141.32 REMARK 500 2 ARG A 287 105.07 57.70 REMARK 500 2 LEU A 294 137.79 73.80 REMARK 500 2 THR A 297 -67.49 73.83 REMARK 500 2 ALA A 299 -41.42 -158.67 REMARK 500 2 LEU A 340 60.68 62.78 REMARK 500 3 ASN A 288 85.93 61.63 REMARK 500 3 ALA A 299 -79.07 -166.95 REMARK 500 3 ARG A 305 60.00 -92.05 REMARK 500 4 ARG A 283 83.11 57.55 REMARK 500 4 VAL A 285 78.83 53.02 REMARK 500 4 ARG A 287 -150.36 65.37 REMARK 500 4 LEU A 294 -83.78 -98.83 REMARK 500 4 THR A 297 76.83 60.88 REMARK 500 4 ALA A 299 -73.21 -153.04 REMARK 500 4 ASN A 306 59.99 -160.33 REMARK 500 4 VAL A 368 -43.93 -131.15 REMARK 500 4 LEU A 383 -66.93 -99.77 REMARK 500 5 ARG A 283 88.42 64.05 REMARK 500 5 ARG A 287 -23.38 78.57 REMARK 500 5 ASN A 288 70.43 67.27 REMARK 500 5 ASN A 300 -9.86 74.01 REMARK 500 5 ASN A 306 70.45 -115.70 REMARK 500 6 VAL A 285 75.35 56.01 REMARK 500 6 ALA A 299 168.15 67.72 REMARK 500 6 ASN A 300 -66.33 68.84 REMARK 500 6 ARG A 305 -176.30 60.83 REMARK 500 6 ASN A 306 92.52 56.45 REMARK 500 6 ARG A 307 88.19 -163.66 REMARK 500 6 LEU A 383 -68.61 -100.13 REMARK 500 7 VAL A 285 -89.03 62.88 REMARK 500 7 ASP A 286 -66.79 170.60 REMARK 500 7 ILE A 292 32.50 -87.44 REMARK 500 7 ASN A 293 100.87 68.74 REMARK 500 7 MET A 295 159.60 68.37 REMARK 500 7 ARG A 307 -64.90 -168.43 REMARK 500 8 GLN A 282 -81.87 62.72 REMARK 500 8 VAL A 285 79.13 56.75 REMARK 500 8 ARG A 287 -164.65 59.56 REMARK 500 8 LEU A 294 -85.49 62.63 REMARK 500 8 THR A 297 71.30 64.44 REMARK 500 REMARK 500 THIS ENTRY HAS 131 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17737 RELATED DB: BMRB REMARK 900 RELATED ID: APC40104.5 RELATED DB: TARGETDB REMARK 900 RELATED ID: PST2A RELATED DB: TARGETDB DBREF 2LF3 A 281 385 UNP Q8RP04 HPAB3_PSEYM 281 385 SEQADV 2LF3 GLN A 279 UNP Q8RP04 EXPRESSION TAG SEQADV 2LF3 GLY A 280 UNP Q8RP04 EXPRESSION TAG SEQRES 1 A 107 GLN GLY SER GLN ARG PRO VAL ASP ARG ASN PRO PRO ARG SEQRES 2 A 107 ILE ASN LEU MET PRO THR GLY ALA ASN ARG VAL ALA MET SEQRES 3 A 107 ARG ASN ARG GLY ASN ASN GLU ALA ASP ALA ALA LEU GLN SEQRES 4 A 107 ALA LEU ALA GLN ASN GLY ILE ASN MET GLU ASP LEU ARG SEQRES 5 A 107 ALA ALA LEU GLU ALA TYR ILE VAL TRP LEU ARG PRO ILE SEQRES 6 A 107 PRO LEU ASP ILE ALA ASN ALA LEU GLU GLY VAL GLY ILE SEQRES 7 A 107 THR PRO ARG PHE ASP ASN PRO GLU GLU ALA LYS VAL ASP SEQRES 8 A 107 ASN PRO LEU MET ASN LEU SER SER ALA LEU LYS ARG ARG SEQRES 9 A 107 LEU ASP ALA HELIX 1 1 ASN A 300 ARG A 305 1 6 HELIX 2 2 GLY A 308 GLY A 323 1 16 HELIX 3 3 ASN A 325 VAL A 338 1 14 HELIX 4 4 PRO A 344 VAL A 354 1 11 HELIX 5 5 ASN A 370 ALA A 385 1 16 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1