HEADER CELL ADHESION 16-AUG-11 2LHT TITLE SOLUTION STRUCTURE OF VENTURIA INAEQUALIS CELLOPHANE-INDUCED 1 PROTEIN TITLE 2 (VICIN1) DOMAINS 1 AND 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELLOPHANE-INDUCED PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 26-148; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VENTURIA INAEQUALIS; SOURCE 3 ORGANISM_COMMON: APPLE SCAB FUNGUS; SOURCE 4 ORGANISM_TAXID: 5025; SOURCE 5 STRAIN: MNH135; SOURCE 6 GENE: CIN1, VICIN1; SOURCE 7 EXPRESSION_SYSTEM: PICHIA PASTORIS; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: KM71H; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PPICZABCIN1-2D KEYWDS SECRETED REPEAT DOMAIN, CELL ADHESION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.H.MESARICH,M.SCHMITZ,P.TREMOUILHAC,D.R.GREENWOOD,D.J.MCGILLIVRAY, AUTHOR 2 M.D.TEMPLETON,A.J.DINGLEY REVDAT 3 14-JUN-23 2LHT 1 REMARK REVDAT 2 08-AUG-12 2LHT 1 JRNL REVDAT 1 18-JUL-12 2LHT 0 JRNL AUTH C.H.MESARICH,M.SCHMITZ,P.TREMOUILHAC,D.J.MCGILLIVRAY, JRNL AUTH 2 M.D.TEMPLETON,A.J.DINGLEY JRNL TITL STRUCTURE, DYNAMICS AND DOMAIN ORGANIZATION OF THE REPEAT JRNL TITL 2 PROTEIN CIN1 FROM THE APPLE SCAB FUNGUS. JRNL REF BIOCHIM.BIOPHYS.ACTA V.1824 1118 2012 JRNL REFN ISSN 0006-3002 JRNL PMID 22771296 JRNL DOI 10.1016/J.BBAPAP.2012.06.015 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TOPSPIN 2.1PL3, CNS REMARK 3 AUTHORS : BRUKER BIOSPIN (TOPSPIN), BRUNGER, ADAMS, CLORE, REMARK 3 GROS, NILGES AND READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT AGAINST DISTANCE, TORSION REMARK 3 ANGLE AND RDC CONSTRAINTS IN A 8 ANGSTROM WATER SHELL, USING A REMARK 3 MODIFIED VERSION OF THE WATERREFCNS SCRIPTS. DISULFIDE BONDS REMARK 3 BETWEEN RESIDUES 47-57, 64-77, 103-113 AND 120-129 WERE ADDED AS REMARK 3 TOPOLOGY PATCHES IN CNS. REMARK 4 REMARK 4 2LHT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-AUG-11. REMARK 100 THE DEPOSITION ID IS D_1000102401. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298.15 REMARK 210 PH : 6.2 REMARK 210 IONIC STRENGTH : 0.050 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.6-0.8 MM [U-99% 13C; U-99% REMARK 210 15N] VICIN1-D1D2, 25 MM REMARK 210 POTASSIUM PHOSPHATE, 95% H2O/5% REMARK 210 D2O; 1.0 MM [U-99% 13C; U-99% REMARK 210 15N] VICIN1-D1D2, 25 MM REMARK 210 POTASSIUM PHOSPHATE, 5-6 % REMARK 210 POLYACRYLAMIDE GEL, 95% H2O/5% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCA; 3D REMARK 210 HN(CO)CA; 3D CBCANH; 3D CBCA(CO) REMARK 210 NH; 3D HNCO; 3D HCAN; 3D H(CCO) REMARK 210 NH; 3D C(CO)NH; 3D 1H-15N TOCSY; REMARK 210 3D HCCH-TOCSY; 2D HBCBCGCDHG; 2D REMARK 210 HBCBCGCDCEHE; 3D 1H-15N NOESY; REMARK 210 3D 1H-13C NOESY ALIPHATIC; 3D 1H- REMARK 210 13C NOESY AROMATIC; 2D 1H-15N REMARK 210 IPAP-HSQC; 2D 1H-15N R2 REMARK 210 RELAXATION; 2D 1H-15N R1 REMARK 210 RELAXATION; 2D 1H-15N REMARK 210 HETERONUCLEAR NOE REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, CCPNMR 2.07, UNIO10 2.0 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 40 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 121 HZ2 LYS A 122 1.58 REMARK 500 OE2 GLU A 83 HZ3 LYS A 86 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 32 109.61 -59.33 REMARK 500 1 TYR A 37 21.82 -147.54 REMARK 500 1 ASP A 38 134.31 73.65 REMARK 500 1 LEU A 42 99.48 -69.03 REMARK 500 1 LYS A 67 -61.46 65.47 REMARK 500 1 TYR A 85 32.32 -96.48 REMARK 500 1 PRO A 97 45.34 -83.31 REMARK 500 1 LEU A 100 -22.77 172.12 REMARK 500 1 CYS A 120 41.17 -84.18 REMARK 500 1 LYS A 122 -69.07 -126.58 REMARK 500 1 LYS A 123 -69.53 -132.33 REMARK 500 2 ASP A 27 -63.85 -94.60 REMARK 500 2 VAL A 28 140.28 169.72 REMARK 500 2 ASP A 38 -73.48 -169.97 REMARK 500 2 LYS A 67 -63.64 67.48 REMARK 500 2 PRO A 87 -77.53 -75.61 REMARK 500 2 VAL A 89 107.88 -165.00 REMARK 500 2 LEU A 100 -0.21 -157.28 REMARK 500 2 ALA A 106 -69.02 -92.46 REMARK 500 2 CYS A 120 43.65 -69.34 REMARK 500 2 LYS A 122 -71.55 -130.33 REMARK 500 2 LYS A 123 -69.06 -133.40 REMARK 500 2 PRO A 143 -91.80 -74.86 REMARK 500 3 ASP A 27 -36.50 71.33 REMARK 500 3 PRO A 32 101.48 -43.93 REMARK 500 3 TYR A 37 -61.86 -143.56 REMARK 500 3 PRO A 41 -178.15 -67.30 REMARK 500 3 CYS A 64 84.93 -156.23 REMARK 500 3 LEU A 100 21.12 -158.82 REMARK 500 3 CYS A 120 41.83 -82.39 REMARK 500 3 LYS A 122 -72.44 -128.46 REMARK 500 3 PRO A 143 -87.53 -41.38 REMARK 500 4 VAL A 28 20.90 47.72 REMARK 500 4 PRO A 32 115.67 -35.56 REMARK 500 4 THR A 33 87.34 -65.33 REMARK 500 4 GLN A 34 14.91 -161.96 REMARK 500 4 ASP A 38 119.75 73.66 REMARK 500 4 LEU A 100 27.62 46.77 REMARK 500 4 CYS A 120 41.18 -99.34 REMARK 500 4 LYS A 122 -72.73 -128.46 REMARK 500 4 LYS A 123 -71.81 -131.17 REMARK 500 4 PRO A 143 -87.45 -63.29 REMARK 500 4 PRO A 146 -177.44 -64.36 REMARK 500 5 ASP A 27 77.46 -110.86 REMARK 500 5 VAL A 28 97.98 65.14 REMARK 500 5 PRO A 32 -157.57 -85.07 REMARK 500 5 TYR A 37 -49.76 -160.51 REMARK 500 5 ASP A 38 132.78 -179.28 REMARK 500 5 PRO A 41 -149.21 -78.20 REMARK 500 5 LYS A 67 -38.15 52.52 REMARK 500 REMARK 500 THIS ENTRY HAS 204 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17865 RELATED DB: BMRB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE AUTHOR STATES THAT THE ACCESSION CODE FOR THE PROTEIN SEQUENCE REMARK 999 IS ABW70130.2. THE ADDITIONAL GLU RESIDUE INSERTED AT POSITION 72 REMARK 999 OF THE PROTEIN SEQUENCE IN VERSION ABW70130.1 HAS BEEN REMOVED IN REMARK 999 VERSION ABW70130.2. DBREF 2LHT A 26 147 UNP A8W3P3 A8W3P3_VENIN 26 148 SEQADV 2LHT A UNP A8W3P3 GLU 72 SEE REMARK 999 SEQRES 1 A 122 ALA ASP VAL PHE ASP PRO PRO THR GLN TYR GLY TYR ASP SEQRES 2 A 122 GLY LYS PRO LEU ASP ALA SER PHE CYS ARG THR ALA GLY SEQRES 3 A 122 SER ARG GLU LYS ASP CYS ARG LYS ASP VAL GLN ALA CYS SEQRES 4 A 122 ASP LYS LYS TYR ASP ASP GLN GLY ARG GLU THR ALA CYS SEQRES 5 A 122 ALA LYS GLY ILE ARG GLU LYS TYR LYS PRO ALA VAL VAL SEQRES 6 A 122 TYR GLY TYR ASP GLY LYS PRO LEU ASP LEU GLY PHE CYS SEQRES 7 A 122 THR LEU ALA GLY ILE ARG GLU VAL ASP CYS ARG LYS ASP SEQRES 8 A 122 ALA GLN THR CYS ASP LYS LYS TYR GLU SER ASP LYS CYS SEQRES 9 A 122 LEU ASN ALA ILE LYS GLU LYS TYR LYS PRO VAL VAL ASP SEQRES 10 A 122 PRO ASN PRO PRO ALA HELIX 1 1 ASP A 43 THR A 49 1 7 HELIX 2 2 ALA A 50 SER A 52 5 3 HELIX 3 3 ARG A 53 CYS A 64 1 12 HELIX 4 4 THR A 75 TYR A 85 1 11 HELIX 5 5 ARG A 109 ALA A 117 1 9 HELIX 6 6 GLN A 118 ASP A 121 5 4 HELIX 7 7 GLU A 125 GLU A 135 1 11 HELIX 8 8 LYS A 136 LYS A 138 5 3 SSBOND 1 CYS A 47 CYS A 57 1555 1555 2.03 SSBOND 2 CYS A 64 CYS A 77 1555 1555 2.03 SSBOND 3 CYS A 103 CYS A 113 1555 1555 2.03 SSBOND 4 CYS A 120 CYS A 129 1555 1555 2.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1