HEADER DNA BINDING PROTEIN 24-AUG-11 2LI6 TITLE 1H, 13C, AND 15N CHEMICAL SHIFT ASSIGNMENTS FOR YEAST PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: SWI/SNF CHROMATIN-REMODELING COMPLEX SUBUNIT SWI1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 390-505; COMPND 5 SYNONYM: REGULATORY PROTEIN GAM3, SWI/SNF COMPLEX SUBUNIT SWI1, COMPND 6 TRANSCRIPTION REGULATORY PROTEIN ADR6, TRANSCRIPTION REGULATORY COMPND 7 PROTEIN SWI1; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 STRAIN: ATCC 204508 / S288C; SOURCE 6 GENE: ADR6, GAM3, SWI1, YPL016W, LPA1; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET 22B KEYWDS LIGAND BINDING, DNA BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.WANG,J.ZHANG,X.TU REVDAT 2 14-JUN-23 2LI6 1 REMARK REVDAT 1 25-APR-12 2LI6 0 JRNL AUTH T.WANG,J.ZHANG,X.ZHANG,X.TU JRNL TITL SOLUTION STRUCTURE OF SWI1 ARID DOMAIN FROM SACCHAROMYCES JRNL TITL 2 CEREVISIAE AND ITS NON-SPECIFIC BINDING TO DNA JRNL REF PROTEINS 2012 JRNL REFN ESSN 1097-0134 JRNL PMID 22488857 JRNL DOI 10.1002/PROT.24091 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SPARKY, CNS, SPARKY REMARK 3 AUTHORS : GODDARD (SPARKY), BRUNGER, ADAMS, CLORE, GROS, REMARK 3 NILGES AND READ (CNS), GODDARD (SPARKY) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LI6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-SEP-11. REMARK 100 THE DEPOSITION ID IS D_1000102414. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 0.1 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 100 MM SODIUM CHLORIDE-1, 2 MM REMARK 210 SODIUM PHOSPHATE-2, 1.5 MM EDTA- REMARK 210 3, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D CBCA(CO)NH; REMARK 210 3D HNCACB; 3D H(CCO)NH; 3D REMARK 210 HBHA(CO)NH; 3D 1H-15N NOESY; 3D REMARK 210 1H-13C NOESY; 3D C(CO)NH REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : DMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA REMARK 210 METHOD USED : DGSA-DISTANCE GEOMETRY SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 72.30 -158.18 REMARK 500 1 SER A 12 144.59 65.96 REMARK 500 1 LEU A 15 -10.86 78.82 REMARK 500 1 ASN A 35 -54.32 -131.19 REMARK 500 1 LEU A 38 -166.78 -112.81 REMARK 500 1 SER A 40 -75.45 -157.83 REMARK 500 1 ASN A 46 41.40 179.67 REMARK 500 1 ARG A 47 106.44 63.73 REMARK 500 1 LYS A 48 13.84 -144.46 REMARK 500 1 ASP A 84 58.38 -97.35 REMARK 500 1 TYR A 85 -140.98 69.69 REMARK 500 1 LEU A 97 159.20 -44.70 REMARK 500 1 LYS A 115 173.35 63.19 REMARK 500 2 GLU A 9 31.40 -97.42 REMARK 500 2 SER A 12 111.92 63.76 REMARK 500 2 LEU A 15 -10.77 78.42 REMARK 500 2 ASN A 35 -63.31 -135.09 REMARK 500 2 MET A 36 75.04 -119.81 REMARK 500 2 SER A 40 -75.39 -161.10 REMARK 500 2 ASN A 46 40.11 179.89 REMARK 500 2 ARG A 47 106.32 63.09 REMARK 500 2 LYS A 48 12.08 -141.96 REMARK 500 2 ASP A 84 58.82 -91.36 REMARK 500 2 TYR A 85 -138.71 69.62 REMARK 500 2 LEU A 97 151.35 -41.95 REMARK 500 2 LYS A 115 -170.75 57.75 REMARK 500 3 SER A 2 42.81 -149.71 REMARK 500 3 LEU A 3 -45.46 -155.67 REMARK 500 3 GLN A 8 56.09 -150.17 REMARK 500 3 SER A 12 145.23 66.40 REMARK 500 3 LEU A 15 -19.28 80.50 REMARK 500 3 ASN A 35 -59.08 -136.89 REMARK 500 3 MET A 36 77.28 -112.42 REMARK 500 3 SER A 40 -76.42 -175.09 REMARK 500 3 ASN A 46 43.14 -179.84 REMARK 500 3 ARG A 47 107.75 63.93 REMARK 500 3 LYS A 48 14.46 -142.92 REMARK 500 3 ASP A 84 58.80 -92.12 REMARK 500 3 TYR A 85 -138.39 68.71 REMARK 500 3 LYS A 115 -176.40 57.36 REMARK 500 4 LEU A 3 -67.50 -125.11 REMARK 500 4 GLN A 8 44.57 -152.48 REMARK 500 4 SER A 12 155.43 64.58 REMARK 500 4 THR A 13 -51.76 -139.73 REMARK 500 4 LEU A 15 -13.46 79.33 REMARK 500 4 ASN A 35 -53.76 -132.72 REMARK 500 4 SER A 40 -75.38 -162.44 REMARK 500 4 ASN A 46 36.57 179.83 REMARK 500 4 ARG A 47 106.35 62.52 REMARK 500 4 LYS A 48 14.22 -145.06 REMARK 500 REMARK 500 THIS ENTRY HAS 282 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17880 RELATED DB: BMRB DBREF 2LI6 A 1 116 UNP P09547 SWI1_YEAST 390 505 SEQRES 1 A 116 GLN SER LEU ASN PRO ALA LEU GLN GLU LYS ILE SER THR SEQRES 2 A 116 GLU LEU ASN ASN LYS GLN TYR GLU LEU PHE MET LYS SER SEQRES 3 A 116 LEU ILE GLU ASN CYS LYS LYS ARG ASN MET PRO LEU GLN SEQRES 4 A 116 SER ILE PRO GLU ILE GLY ASN ARG LYS ILE ASN LEU PHE SEQRES 5 A 116 TYR LEU TYR MET LEU VAL GLN LYS PHE GLY GLY ALA ASP SEQRES 6 A 116 GLN VAL THR ARG THR GLN GLN TRP SER MET VAL ALA GLN SEQRES 7 A 116 ARG LEU GLN ILE SER ASP TYR GLN GLN LEU GLU SER ILE SEQRES 8 A 116 TYR PHE ARG ILE LEU LEU PRO TYR GLU ARG HIS MET ILE SEQRES 9 A 116 SER GLN GLU GLY ILE LYS GLU THR GLN ALA LYS ARG HELIX 1 1 ASN A 16 LYS A 33 1 18 HELIX 2 2 PHE A 52 GLY A 62 1 11 HELIX 3 3 GLY A 63 THR A 70 1 8 HELIX 4 4 GLN A 72 GLN A 81 1 10 HELIX 5 5 GLN A 86 LEU A 97 1 12 HELIX 6 6 LEU A 97 GLN A 106 1 10 HELIX 7 7 ILE A 109 LYS A 115 1 7 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1