data_2LM9 # _entry.id 2LM9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2LM9 pdb_00002lm9 10.2210/pdb2lm9/pdb RCSB RCSB102555 ? ? BMRB 18107 ? ? WWPDB D_1000102555 ? ? # _pdbx_database_related.db_id 18107 _pdbx_database_related.db_name BMRB _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2LM9 _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2011-11-29 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tan, K.W.' 1 'Mok, Y.K.' 2 # _citation.id primary _citation.title 'NMR structure and IgE epitopes of Blo t 21, a major dust mite allergen from Blomia tropicalis' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year 2012 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 1083-351X _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22887997 _citation.pdbx_database_id_DOI 10.1074/jbc.M112.348730 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tan, K.W.' 1 ? primary 'Ong, T.C.' 2 ? primary 'Gao, Y.F.' 3 ? primary 'Tiong, Y.S.' 4 ? primary 'Wong, K.N.' 5 ? primary 'Chew, F.T.' 6 ? primary 'Mok, Y.K.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Blo t 21 allergen' _entity.formula_weight 11208.636 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'UNP residues 34-129' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;NTATQRFHEIEKFLLHITHEVDDLEKTGNKDEKARLLRELTVSEAFIEGSRGYFQRELKRTDLDLLEKFNFEAALATGDL LLKDLKALQKRVQDSE ; _entity_poly.pdbx_seq_one_letter_code_can ;NTATQRFHEIEKFLLHITHEVDDLEKTGNKDEKARLLRELTVSEAFIEGSRGYFQRELKRTDLDLLEKFNFEAALATGDL LLKDLKALQKRVQDSE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 THR n 1 3 ALA n 1 4 THR n 1 5 GLN n 1 6 ARG n 1 7 PHE n 1 8 HIS n 1 9 GLU n 1 10 ILE n 1 11 GLU n 1 12 LYS n 1 13 PHE n 1 14 LEU n 1 15 LEU n 1 16 HIS n 1 17 ILE n 1 18 THR n 1 19 HIS n 1 20 GLU n 1 21 VAL n 1 22 ASP n 1 23 ASP n 1 24 LEU n 1 25 GLU n 1 26 LYS n 1 27 THR n 1 28 GLY n 1 29 ASN n 1 30 LYS n 1 31 ASP n 1 32 GLU n 1 33 LYS n 1 34 ALA n 1 35 ARG n 1 36 LEU n 1 37 LEU n 1 38 ARG n 1 39 GLU n 1 40 LEU n 1 41 THR n 1 42 VAL n 1 43 SER n 1 44 GLU n 1 45 ALA n 1 46 PHE n 1 47 ILE n 1 48 GLU n 1 49 GLY n 1 50 SER n 1 51 ARG n 1 52 GLY n 1 53 TYR n 1 54 PHE n 1 55 GLN n 1 56 ARG n 1 57 GLU n 1 58 LEU n 1 59 LYS n 1 60 ARG n 1 61 THR n 1 62 ASP n 1 63 LEU n 1 64 ASP n 1 65 LEU n 1 66 LEU n 1 67 GLU n 1 68 LYS n 1 69 PHE n 1 70 ASN n 1 71 PHE n 1 72 GLU n 1 73 ALA n 1 74 ALA n 1 75 LEU n 1 76 ALA n 1 77 THR n 1 78 GLY n 1 79 ASP n 1 80 LEU n 1 81 LEU n 1 82 LEU n 1 83 LYS n 1 84 ASP n 1 85 LEU n 1 86 LYS n 1 87 ALA n 1 88 LEU n 1 89 GLN n 1 90 LYS n 1 91 ARG n 1 92 VAL n 1 93 GLN n 1 94 ASP n 1 95 SER n 1 96 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name Mite _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Blomia tropicalis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 40697 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain DE3 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type vector _entity_src_gen.pdbx_host_org_vector pGEX-4T-1 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A7IZF3_BLOTA _struct_ref.pdbx_db_accession A7IZF3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;NTATQRFHEIEKFLLHITHEVDDLEKTGNKDEKARLLRELTVSEAFIEGSRGYFQRELKRTDLDLLEKFNFEAALATGDL LLKDLKALQKRVQDSE ; _struct_ref.pdbx_align_begin 34 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2LM9 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 96 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A7IZF3 _struct_ref_seq.db_align_beg 34 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 129 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 18 _struct_ref_seq.pdbx_auth_seq_align_end 113 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '2D DQF-COSY' 1 3 1 '3D HNCACB' 1 4 1 '3D CBCA(CO)NH' 1 5 1 '3D C(CO)NH' 1 6 1 '3D H(CCO)NH' 1 7 1 '2D 1H-1H TOCSY' 1 8 1 '2D 1H-1H NOESY' 1 9 1 '3D 1H-15N NOESY' 1 10 1 '3D 1H-13C NOESY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pH 7 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents '0.8 mM sodium phosphate-1, 95% H2O/5% D2O' _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '95% H2O/5% D2O' # _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2LM9 _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2LM9 _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.representative_conformer 1 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2LM9 _pdbx_nmr_representative.selection_criteria 'minimized average structure' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.ordinal _pdbx_nmr_software.version Goddard 'chemical shift assignment' Sparky 1 ? 'BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ' refinement CNS 2 ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2LM9 _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2LM9 _struct.title 'The NMR structure of a major allergen from dust mite' _struct.pdbx_model_details 'minimized average structure, model 1' _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details 'minimized average' # _struct_keywords.entry_id 2LM9 _struct_keywords.pdbx_keywords ALLERGEN _struct_keywords.text 'dust mite, allergen' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 1 ? GLY A 28 ? ASN A 18 GLY A 45 1 ? 28 HELX_P HELX_P2 2 ASP A 31 ? LEU A 58 ? ASP A 48 LEU A 75 1 ? 28 HELX_P HELX_P3 3 ASP A 64 ? GLU A 96 ? ASP A 81 GLU A 113 1 ? 33 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 2LM9 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 18 18 ASN ASN A . n A 1 2 THR 2 19 19 THR THR A . n A 1 3 ALA 3 20 20 ALA ALA A . n A 1 4 THR 4 21 21 THR THR A . n A 1 5 GLN 5 22 22 GLN GLN A . n A 1 6 ARG 6 23 23 ARG ARG A . n A 1 7 PHE 7 24 24 PHE PHE A . n A 1 8 HIS 8 25 25 HIS HIS A . n A 1 9 GLU 9 26 26 GLU GLU A . n A 1 10 ILE 10 27 27 ILE ILE A . n A 1 11 GLU 11 28 28 GLU GLU A . n A 1 12 LYS 12 29 29 LYS LYS A . n A 1 13 PHE 13 30 30 PHE PHE A . n A 1 14 LEU 14 31 31 LEU LEU A . n A 1 15 LEU 15 32 32 LEU LEU A . n A 1 16 HIS 16 33 33 HIS HIS A . n A 1 17 ILE 17 34 34 ILE ILE A . n A 1 18 THR 18 35 35 THR THR A . n A 1 19 HIS 19 36 36 HIS HIS A . n A 1 20 GLU 20 37 37 GLU GLU A . n A 1 21 VAL 21 38 38 VAL VAL A . n A 1 22 ASP 22 39 39 ASP ASP A . n A 1 23 ASP 23 40 40 ASP ASP A . n A 1 24 LEU 24 41 41 LEU LEU A . n A 1 25 GLU 25 42 42 GLU GLU A . n A 1 26 LYS 26 43 43 LYS LYS A . n A 1 27 THR 27 44 44 THR THR A . n A 1 28 GLY 28 45 45 GLY GLY A . n A 1 29 ASN 29 46 46 ASN ASN A . n A 1 30 LYS 30 47 47 LYS LYS A . n A 1 31 ASP 31 48 48 ASP ASP A . n A 1 32 GLU 32 49 49 GLU GLU A . n A 1 33 LYS 33 50 50 LYS LYS A . n A 1 34 ALA 34 51 51 ALA ALA A . n A 1 35 ARG 35 52 52 ARG ARG A . n A 1 36 LEU 36 53 53 LEU LEU A . n A 1 37 LEU 37 54 54 LEU LEU A . n A 1 38 ARG 38 55 55 ARG ARG A . n A 1 39 GLU 39 56 56 GLU GLU A . n A 1 40 LEU 40 57 57 LEU LEU A . n A 1 41 THR 41 58 58 THR THR A . n A 1 42 VAL 42 59 59 VAL VAL A . n A 1 43 SER 43 60 60 SER SER A . n A 1 44 GLU 44 61 61 GLU GLU A . n A 1 45 ALA 45 62 62 ALA ALA A . n A 1 46 PHE 46 63 63 PHE PHE A . n A 1 47 ILE 47 64 64 ILE ILE A . n A 1 48 GLU 48 65 65 GLU GLU A . n A 1 49 GLY 49 66 66 GLY GLY A . n A 1 50 SER 50 67 67 SER SER A . n A 1 51 ARG 51 68 68 ARG ARG A . n A 1 52 GLY 52 69 69 GLY GLY A . n A 1 53 TYR 53 70 70 TYR TYR A . n A 1 54 PHE 54 71 71 PHE PHE A . n A 1 55 GLN 55 72 72 GLN GLN A . n A 1 56 ARG 56 73 73 ARG ARG A . n A 1 57 GLU 57 74 74 GLU GLU A . n A 1 58 LEU 58 75 75 LEU LEU A . n A 1 59 LYS 59 76 76 LYS LYS A . n A 1 60 ARG 60 77 77 ARG ARG A . n A 1 61 THR 61 78 78 THR THR A . n A 1 62 ASP 62 79 79 ASP ASP A . n A 1 63 LEU 63 80 80 LEU LEU A . n A 1 64 ASP 64 81 81 ASP ASP A . n A 1 65 LEU 65 82 82 LEU LEU A . n A 1 66 LEU 66 83 83 LEU LEU A . n A 1 67 GLU 67 84 84 GLU GLU A . n A 1 68 LYS 68 85 85 LYS LYS A . n A 1 69 PHE 69 86 86 PHE PHE A . n A 1 70 ASN 70 87 87 ASN ASN A . n A 1 71 PHE 71 88 88 PHE PHE A . n A 1 72 GLU 72 89 89 GLU GLU A . n A 1 73 ALA 73 90 90 ALA ALA A . n A 1 74 ALA 74 91 91 ALA ALA A . n A 1 75 LEU 75 92 92 LEU LEU A . n A 1 76 ALA 76 93 93 ALA ALA A . n A 1 77 THR 77 94 94 THR THR A . n A 1 78 GLY 78 95 95 GLY GLY A . n A 1 79 ASP 79 96 96 ASP ASP A . n A 1 80 LEU 80 97 97 LEU LEU A . n A 1 81 LEU 81 98 98 LEU LEU A . n A 1 82 LEU 82 99 99 LEU LEU A . n A 1 83 LYS 83 100 100 LYS LYS A . n A 1 84 ASP 84 101 101 ASP ASP A . n A 1 85 LEU 85 102 102 LEU LEU A . n A 1 86 LYS 86 103 103 LYS LYS A . n A 1 87 ALA 87 104 104 ALA ALA A . n A 1 88 LEU 88 105 105 LEU LEU A . n A 1 89 GLN 89 106 106 GLN GLN A . n A 1 90 LYS 90 107 107 LYS LYS A . n A 1 91 ARG 91 108 108 ARG ARG A . n A 1 92 VAL 92 109 109 VAL VAL A . n A 1 93 GLN 93 110 110 GLN GLN A . n A 1 94 ASP 94 111 111 ASP ASP A . n A 1 95 SER 95 112 112 SER SER A . n A 1 96 GLU 96 113 113 GLU GLU A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-08-22 2 'Structure model' 1 1 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' database_2 2 2 'Structure model' pdbx_database_status 3 2 'Structure model' pdbx_nmr_software 4 2 'Structure model' pdbx_nmr_spectrometer # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 2 'Structure model' '_pdbx_nmr_software.name' 5 2 'Structure model' '_pdbx_nmr_spectrometer.model' # _pdbx_nmr_exptl_sample.component 'sodium phosphate-1' _pdbx_nmr_exptl_sample.concentration 0.8 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units mM _pdbx_nmr_exptl_sample.isotopic_labeling ? _pdbx_nmr_exptl_sample.solution_id 1 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 2 OE2 A GLU 61 ? ? HZ3 A LYS 103 ? ? 1.58 2 3 HZ3 A LYS 85 ? ? OE1 A GLU 89 ? ? 1.58 3 6 OE2 A GLU 42 ? ? HZ2 A LYS 50 ? ? 1.57 4 8 OE2 A GLU 42 ? ? HG A SER 112 ? ? 1.59 5 9 HZ1 A LYS 50 ? ? O A GLU 113 ? ? 1.59 6 14 OE2 A GLU 42 ? ? HZ3 A LYS 50 ? ? 1.60 7 18 HZ3 A LYS 50 ? ? OE2 A GLU 113 ? ? 1.60 8 19 HZ1 A LYS 50 ? ? OE1 A GLU 113 ? ? 1.58 9 20 OE2 A GLU 42 ? ? HZ3 A LYS 50 ? ? 1.58 10 20 OD2 A ASP 96 ? ? HZ2 A LYS 100 ? ? 1.60 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 48 ? ? -146.74 -18.26 2 1 THR A 78 ? ? 73.35 -32.68 3 2 ASP A 48 ? ? -155.70 -3.68 4 2 THR A 78 ? ? 73.81 -5.91 5 2 SER A 112 ? ? 49.85 -46.00 6 3 ASP A 48 ? ? -157.72 12.56 7 3 THR A 78 ? ? 76.00 -42.74 8 3 ASP A 81 ? ? -125.46 -162.31 9 4 ASN A 46 ? ? 71.60 73.43 10 4 ASP A 48 ? ? -146.73 -13.76 11 4 THR A 78 ? ? 75.79 -5.20 12 4 ASP A 79 ? ? -95.42 38.22 13 5 THR A 78 ? ? 75.34 -37.18 14 5 ASP A 81 ? ? -121.47 -167.63 15 6 ASP A 48 ? ? -150.68 -9.74 16 6 THR A 78 ? ? 77.28 -22.65 17 6 LEU A 80 ? ? -55.54 171.22 18 7 THR A 78 ? ? 75.87 -46.66 19 7 ASP A 81 ? ? -127.11 -161.88 20 7 SER A 112 ? ? 60.73 -25.98 21 8 ASN A 46 ? ? 67.47 60.90 22 8 ASP A 81 ? ? -108.76 -158.85 23 9 ASN A 46 ? ? 109.19 -3.90 24 9 THR A 78 ? ? 73.54 -32.59 25 9 ASP A 79 ? ? -57.91 -76.13 26 9 LEU A 80 ? ? 58.38 171.87 27 10 THR A 78 ? ? 72.53 -38.25 28 11 THR A 44 ? ? -99.76 -67.72 29 11 THR A 78 ? ? 75.16 -13.20 30 12 THR A 44 ? ? -108.66 -80.97 31 12 THR A 78 ? ? 72.73 -37.49 32 13 THR A 44 ? ? -153.25 -76.51 33 13 ASP A 48 ? ? -150.27 -16.19 34 13 THR A 78 ? ? 77.79 -4.77 35 13 ASP A 81 ? ? -118.34 -162.43 36 14 THR A 78 ? ? 80.11 -22.01 37 15 THR A 78 ? ? 79.03 -26.17 38 15 ASP A 81 ? ? -128.22 -167.94 39 15 SER A 112 ? ? 75.30 -26.25 40 16 ASP A 48 ? ? -152.56 -15.45 41 16 THR A 78 ? ? 73.11 -4.20 42 16 LEU A 80 ? ? -43.39 171.12 43 17 ASP A 48 ? ? -156.40 -21.13 44 17 THR A 78 ? ? 77.46 -31.23 45 17 SER A 112 ? ? 72.10 -30.44 46 18 ASP A 48 ? ? -152.10 13.42 47 18 THR A 78 ? ? 73.33 -33.18 48 19 THR A 78 ? ? 74.11 -38.24 49 20 THR A 78 ? ? 73.35 -17.95 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 4 ARG A 108 ? ? 0.084 'SIDE CHAIN' 2 5 ARG A 77 ? ? 0.073 'SIDE CHAIN' 3 8 ARG A 77 ? ? 0.080 'SIDE CHAIN' 4 12 ARG A 23 ? ? 0.074 'SIDE CHAIN' #