HEADER SIGNALING PROTEIN 12-DEC-11 2LMR TITLE SOLUTION STRUCTURE OF THE FIRST SAM DOMAIN OF ODIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANKYRIN REPEAT AND SAM DOMAIN-CONTAINING PROTEIN 1A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SAM 1 DOMAIN RESIDUES 691-770; COMPND 5 SYNONYM: ODIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ANKS1A, ANKS1, KIAA0229, ODIN; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET15B KEYWDS SIGNALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.LEONE,F.MERCURIO REVDAT 4 15-MAY-24 2LMR 1 REMARK REVDAT 3 14-JUN-23 2LMR 1 REMARK DBREF SEQADV REVDAT 2 28-MAR-12 2LMR 1 JRNL REVDAT 1 14-MAR-12 2LMR 0 JRNL AUTH F.A.MERCURIO,D.MARASCO,L.PIRONE,E.M.PEDONE,M.PELLECCHIA, JRNL AUTH 2 M.LEONE JRNL TITL SOLUTION STRUCTURE OF THE FIRST SAM DOMAIN OF ODIN AND JRNL TITL 2 BINDING STUDIES WITH THE EPHA2 RECEPTOR. JRNL REF BIOCHEMISTRY V. 51 2136 2012 JRNL REFN ISSN 0006-2960 JRNL PMID 22332920 JRNL DOI 10.1021/BI300141H REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMRJ, CYANA 2.1 REMARK 3 AUTHORS : VARIAN (VNMRJ), GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: STRUCTURES WERE CALCULATED WITH CYANA REMARK 3 WITHOUT FURTHER REFINEMENT REMARK 4 REMARK 4 2LMR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-DEC-11. REMARK 100 THE DEPOSITION ID IS D_1000102573. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.7 REMARK 210 IONIC STRENGTH : 0.2 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.9-1 MM [U-100% 13C; U-100% REMARK 210 15N] PROTEIN, 2.7 MM POTASSIUM REMARK 210 CHLORIDE, 1.8 MM POTASSIUM REMARK 210 PHOSPHATE, 140 MM SODIUM REMARK 210 CHLORIDE, 10 MM SODIUM PHOSPHATE, REMARK 210 0.2 % SODIUM AZIDE, 95% H2O/5% REMARK 210 D2O; 0.9-1 MM [U-100% 15N] REMARK 210 PROTEIN, 2.7 MM POTASSIUM REMARK 210 CHLORIDE, 1.8 MM POTASSIUM REMARK 210 PHOSPHATE, 140 MM SODIUM REMARK 210 CHLORIDE, 10 MM SODIUM PHOSPHATE, REMARK 210 0.2 % SODIUM AZIDE, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 2D 1H-1H TOCSY; 2D 1H-1H NOESY; REMARK 210 3D CBCA(CO)NH; 3D C(CO)NH; 3D REMARK 210 HNCA; 3D HNCACB; 3D HCCH-TOCSY; REMARK 210 3D 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : UNITY REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMRJ, XEASY, CYANA 2.1 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 SER A 11 REMARK 465 SER A 12 REMARK 465 GLY A 13 REMARK 465 LEU A 14 REMARK 465 VAL A 15 REMARK 465 PRO A 16 REMARK 465 ARG A 17 REMARK 465 GLY A 18 REMARK 465 SER A 19 REMARK 465 HIS A 20 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 29 71.06 -164.03 REMARK 500 1 ASP A 55 102.70 -51.88 REMARK 500 1 SER A 61 -63.79 -91.57 REMARK 500 1 ILE A 74 94.25 -61.99 REMARK 500 1 PRO A 91 -176.28 -69.81 REMARK 500 1 LYS A 94 108.09 -52.72 REMARK 500 1 TYR A 98 96.04 59.05 REMARK 500 2 SER A 23 171.47 62.63 REMARK 500 2 ARG A 26 99.45 60.70 REMARK 500 2 ASP A 55 102.09 -53.17 REMARK 500 2 SER A 61 -60.70 -132.46 REMARK 500 2 ILE A 74 93.25 -62.20 REMARK 500 2 PRO A 91 -172.88 -69.75 REMARK 500 2 ASP A 99 54.03 -108.44 REMARK 500 3 ILE A 22 75.70 61.68 REMARK 500 3 ARG A 26 -46.79 -160.84 REMARK 500 3 LEU A 28 20.40 -144.07 REMARK 500 3 GLU A 29 36.82 -158.53 REMARK 500 3 SER A 31 -169.36 -114.00 REMARK 500 3 ASP A 55 102.07 -53.34 REMARK 500 3 ILE A 74 91.36 -64.08 REMARK 500 3 ALA A 95 51.75 -116.37 REMARK 500 3 TYR A 98 -44.62 -150.94 REMARK 500 3 ASP A 99 -68.64 -157.31 REMARK 500 4 LEU A 25 -178.93 -171.28 REMARK 500 4 LEU A 28 173.50 61.51 REMARK 500 4 ASP A 55 102.78 -51.58 REMARK 500 4 SER A 61 -53.34 -130.28 REMARK 500 4 ASN A 62 176.06 -55.25 REMARK 500 4 ALA A 95 -172.54 59.05 REMARK 500 4 TYR A 98 142.48 -171.05 REMARK 500 5 LEU A 28 -169.48 -173.63 REMARK 500 5 ASP A 55 99.68 -59.57 REMARK 500 5 ILE A 74 99.08 -57.21 REMARK 500 5 TYR A 98 34.68 -164.77 REMARK 500 5 ASP A 99 76.84 56.31 REMARK 500 6 LEU A 25 -179.15 58.40 REMARK 500 6 LEU A 28 29.18 -163.96 REMARK 500 6 ASP A 55 98.37 -66.46 REMARK 500 6 SER A 61 -68.58 -159.42 REMARK 500 6 ASN A 62 -174.80 -61.30 REMARK 500 6 ILE A 74 97.44 -57.93 REMARK 500 6 PRO A 91 -171.18 -69.66 REMARK 500 6 LEU A 96 165.08 63.06 REMARK 500 6 TYR A 98 -65.08 -109.19 REMARK 500 7 ARG A 26 169.86 62.62 REMARK 500 7 ASP A 55 99.47 -57.11 REMARK 500 7 SER A 61 -52.67 -155.86 REMARK 500 7 ILE A 74 97.74 -58.34 REMARK 500 7 TYR A 98 90.31 -67.29 REMARK 500 REMARK 500 THIS ENTRY HAS 136 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18134 RELATED DB: BMRB DBREF 2LMR A 22 101 UNP Q92625 ANS1A_HUMAN 691 770 SEQADV 2LMR MET A 1 UNP Q92625 EXPRESSION TAG SEQADV 2LMR GLY A 2 UNP Q92625 EXPRESSION TAG SEQADV 2LMR SER A 3 UNP Q92625 EXPRESSION TAG SEQADV 2LMR SER A 4 UNP Q92625 EXPRESSION TAG SEQADV 2LMR HIS A 5 UNP Q92625 EXPRESSION TAG SEQADV 2LMR HIS A 6 UNP Q92625 EXPRESSION TAG SEQADV 2LMR HIS A 7 UNP Q92625 EXPRESSION TAG SEQADV 2LMR HIS A 8 UNP Q92625 EXPRESSION TAG SEQADV 2LMR HIS A 9 UNP Q92625 EXPRESSION TAG SEQADV 2LMR HIS A 10 UNP Q92625 EXPRESSION TAG SEQADV 2LMR SER A 11 UNP Q92625 EXPRESSION TAG SEQADV 2LMR SER A 12 UNP Q92625 EXPRESSION TAG SEQADV 2LMR GLY A 13 UNP Q92625 EXPRESSION TAG SEQADV 2LMR LEU A 14 UNP Q92625 EXPRESSION TAG SEQADV 2LMR VAL A 15 UNP Q92625 EXPRESSION TAG SEQADV 2LMR PRO A 16 UNP Q92625 EXPRESSION TAG SEQADV 2LMR ARG A 17 UNP Q92625 EXPRESSION TAG SEQADV 2LMR GLY A 18 UNP Q92625 EXPRESSION TAG SEQADV 2LMR SER A 19 UNP Q92625 EXPRESSION TAG SEQADV 2LMR HIS A 20 UNP Q92625 EXPRESSION TAG SEQADV 2LMR MET A 21 UNP Q92625 EXPRESSION TAG SEQRES 1 A 101 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 101 LEU VAL PRO ARG GLY SER HIS MET ILE SER GLY LEU ARG SEQRES 3 A 101 THR LEU GLU GLN SER VAL GLY GLU TRP LEU GLU SER ILE SEQRES 4 A 101 GLY LEU GLN GLN TYR GLU SER LYS LEU LEU LEU ASN GLY SEQRES 5 A 101 PHE ASP ASP VAL HIS PHE LEU GLY SER ASN VAL MET GLU SEQRES 6 A 101 GLU GLN ASP LEU ARG ASP ILE GLY ILE SER ASP PRO GLN SEQRES 7 A 101 HIS ARG ARG LYS LEU LEU GLN ALA ALA ARG SER LEU PRO SEQRES 8 A 101 LYS VAL LYS ALA LEU GLY TYR ASP GLY ASN HELIX 1 1 SER A 31 GLY A 40 1 10 HELIX 2 2 LEU A 41 GLN A 43 5 3 HELIX 3 3 TYR A 44 ASN A 51 1 8 HELIX 4 4 GLU A 65 GLY A 73 1 9 HELIX 5 5 ASP A 76 SER A 89 1 14 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1