HEADER ANTIMICROBIAL PROTEIN 16-DEC-11 2LN4 TITLE INSIGHT INTO THE ANTIMICROBIAL ACTIVITIES BASED ON THE STRUCTURE- TITLE 2 ACTIVITY RELATIONSHIPS OF COPRISIN ISOLATED FROM THE DUNG BEETLE, TITLE 3 COPRIS TRIPARTITUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: COPRISIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 38-80; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: COPRIS TRIPARTITUS; SOURCE 4 ORGANISM_TAXID: 438892 KEYWDS ANTIMICROBIAL PROTEIN, COPRISIN, DEFENSIN-LIKE PEPTIDE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR Y.KIM,J.K.KIM,E.LEE REVDAT 2 14-JUN-23 2LN4 1 REMARK SEQADV LINK REVDAT 1 28-NOV-12 2LN4 0 JRNL AUTH E.LEE,J.K.KIM,S.SHIN,K.W.JEONG,A.SHIN,J.LEE,D.G.LEE, JRNL AUTH 2 J.S.HWANG,Y.KIM JRNL TITL INSIGHT INTO THE ANTIMICROBIAL ACTIVITIES OF COPRISIN JRNL TITL 2 ISOLATED FROM THE DUNG BEETLE, COPRIS TRIPARTITUS, REVEALED JRNL TITL 3 BY STRUCTURE-ACTIVITY RELATIONSHIPS JRNL REF BIOCHIM.BIOPHYS.ACTA 2012 JRNL REFN ISSN 0006-3002 JRNL PMID 23137439 JRNL DOI 10.1016/J.BBAMEM.2012.10.028 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1, CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 GUNTERT, MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LN4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-JAN-12. REMARK 100 THE DEPOSITION ID IS D_1000102586. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 4.3 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : 1 MM PROTEIN-1, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H NOESY; 2D 1H-1H TOCSY; REMARK 210 2D DQF-COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 500 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 CYS A 3 43.28 -93.05 REMARK 500 1 SER A 18 93.54 -65.13 REMARK 500 1 LEU A 27 -75.63 -68.89 REMARK 500 1 ARG A 28 47.69 -152.11 REMARK 500 1 LYS A 30 -41.45 -136.34 REMARK 500 2 ARG A 28 44.18 -169.47 REMARK 500 3 VAL A 5 42.13 -97.90 REMARK 500 3 GLU A 9 61.18 -101.94 REMARK 500 3 ILE A 13 -72.49 -131.94 REMARK 500 3 LEU A 27 -70.02 -67.36 REMARK 500 3 ARG A 28 45.08 -159.65 REMARK 500 4 VAL A 5 48.40 -89.65 REMARK 500 4 ALA A 10 143.74 -176.56 REMARK 500 4 LEU A 27 -71.75 -69.58 REMARK 500 4 ARG A 28 49.08 -158.96 REMARK 500 4 LYS A 30 -41.66 -134.06 REMARK 500 5 CYS A 3 48.71 -97.58 REMARK 500 5 ILE A 13 -72.47 -99.41 REMARK 500 5 LEU A 27 -74.17 -68.68 REMARK 500 5 ARG A 28 46.33 -156.09 REMARK 500 6 GLU A 9 90.17 -66.29 REMARK 500 6 SER A 18 112.21 -174.00 REMARK 500 6 ALA A 21 -70.07 -59.86 REMARK 500 6 LEU A 27 -74.68 -69.41 REMARK 500 6 ARG A 28 47.25 -154.48 REMARK 500 7 ASN A 16 77.95 -117.94 REMARK 500 7 LEU A 27 -75.18 -66.58 REMARK 500 7 ARG A 28 42.65 -156.10 REMARK 500 8 ALA A 21 -70.03 -61.19 REMARK 500 8 LEU A 27 -74.44 -68.08 REMARK 500 8 ARG A 28 46.79 -155.08 REMARK 500 8 LYS A 30 -40.61 -133.44 REMARK 500 9 VAL A 5 66.36 -110.81 REMARK 500 9 ALA A 21 -70.03 -61.11 REMARK 500 9 LEU A 27 -71.35 -69.09 REMARK 500 9 ARG A 28 49.55 -158.88 REMARK 500 10 VAL A 5 95.97 -63.40 REMARK 500 10 ALA A 10 67.18 -105.69 REMARK 500 10 LYS A 11 31.08 -99.25 REMARK 500 10 ALA A 21 -70.08 -60.00 REMARK 500 10 LEU A 27 -70.99 -65.10 REMARK 500 10 ARG A 28 47.70 -162.74 REMARK 500 11 SER A 7 102.55 -58.02 REMARK 500 11 GLU A 9 -74.74 -66.62 REMARK 500 11 ALA A 10 144.52 -178.21 REMARK 500 11 HIS A 17 143.37 -173.16 REMARK 500 11 SER A 18 77.44 -111.19 REMARK 500 11 LEU A 27 -76.01 -68.97 REMARK 500 11 ARG A 28 47.09 -152.43 REMARK 500 11 LYS A 30 -45.04 -133.36 REMARK 500 REMARK 500 THIS ENTRY HAS 107 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18146 RELATED DB: BMRB DBREF 2LN4 A 1 43 UNP A9XFZ7 A9XFZ7_9SCAR 38 80 SEQADV 2LN4 NH2 A 44 UNP A9XFZ7 AMIDATION SEQRES 1 A 44 VAL THR CYS ASP VAL LEU SER PHE GLU ALA LYS GLY ILE SEQRES 2 A 44 ALA VAL ASN HIS SER ALA CYS ALA LEU HIS CYS ILE ALA SEQRES 3 A 44 LEU ARG LYS LYS GLY GLY SER CYS GLN ASN GLY VAL CYS SEQRES 4 A 44 VAL CYS ARG ASN NH2 HET NH2 A 44 2 HETNAM NH2 AMINO GROUP FORMUL 1 NH2 H2 N HELIX 1 1 SER A 18 LYS A 29 1 12 SHEET 1 A 2 GLY A 31 GLN A 35 0 SHEET 2 A 2 VAL A 38 ARG A 42 -1 O VAL A 40 N SER A 33 SSBOND 1 CYS A 3 CYS A 34 1555 1555 2.00 SSBOND 2 CYS A 20 CYS A 39 1555 1555 2.10 SSBOND 3 CYS A 24 CYS A 41 1555 1555 2.00 LINK C ASN A 43 N NH2 A 44 1555 1555 1.33 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1