HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 10-FEB-12 2LPD TITLE SOLUTION STRUCTURE OF A MBTH-LIKE PROTEIN FROM BURKHOLDERIA TITLE 2 PSEUDOMALLEI, THE ETIOLOGICAL AGENT RESPONSIBLE FOR MELIOIDOSIS, TITLE 3 SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE TARGET TITLE 4 BUPSA.13472.B COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA PSEUDOMALLEI; SOURCE 3 ORGANISM_TAXID: 28450; SOURCE 4 STRAIN: 1710B; SOURCE 5 GENE: BPSL1726, BURPS1710B_2147; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: AVA0421 KEYWDS INFECTIOUS DISEASE, MELIOIDOSIS, SEATTLE STRUCTURAL GENOMICS CENTER KEYWDS 2 FOR INFECTIOUS DISEASE, SSGCID, DRUG TARGET, STRUCTURAL GENOMICS, KEYWDS 3 UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR G.W.BUCHKO,SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE AUTHOR 2 (SSGCID) REVDAT 3 15-MAY-24 2LPD 1 REMARK REVDAT 2 14-JUN-23 2LPD 1 REMARK SEQADV REVDAT 1 22-FEB-12 2LPD 0 JRNL AUTH G.W.BUCHKO,S.N.HEWITT,A.J.NAPULI,W.C.VAN VOORHIS,P.J.MYLER JRNL TITL SOLUTION STRUCTURE OF A MBTH-LIKE PROTEIN FROM BURKHOLDERIA JRNL TITL 2 PSEUDOMALLEI, THE ETIOLOGICAL AGENT RESPONSIBLE FOR JRNL TITL 3 MELIOIDOSIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1, CNS 1.1, CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ (CNS), REMARK 3 GUNTERT, MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: STRUCTURE DETERMINATION WAS PERFORMED REMARK 3 ITERATIVELY USING CYANA (AUTOMATED NOESY ASSIGNMENTS). A TOTAL REMARK 3 OF 20 STRUCTURES OUT OF 100 WITH LOWEST TARGET FUNCTION FROM THE REMARK 3 FINAL CYANA CALCULATION WERE TAKEN AND REFINED BY RESTRAINED REMARK 3 MOLECULAR DYNAMICS/ENERGY MINIMIZATION IN EXPLICIT WATER (CNS) REMARK 3 AFTER ADDING 1% TO THE UPPER BOUNDARY LIMIT OF THE DISTANCE REMARK 3 RESTRAINTS AND THE VDW LIMIT TO THE LOWER RESTRAINT. PARAM19 WAS REMARK 3 USED FOR THE WATER REFINEMENT CALCULATIONS. REMARK 4 REMARK 4 2LPD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-FEB-12. REMARK 100 THE DEPOSITION ID IS D_1000102666. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 0.12 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.0 MM [U-99% 13C; U-99% 15N] REMARK 210 PROTEIN, 100 MM SODIUM CHLORIDE, REMARK 210 20 MM TRIS, 1 MM DTT, 93% H2O/7% REMARK 210 D2O; 1.0 MM [U-99% 15N] PROTEIN, REMARK 210 100 MM SODIUM CHLORIDE, 20 MM REMARK 210 TRIS, 1 MM DTT, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 3D 1H-13C NOESY REMARK 210 AROMATIC; 3D 1H-15N NOESY; 3D REMARK 210 HNCACB; 3D CBCA(CO)NH; 3D HNCO; REMARK 210 3D C(CO)NH; DEUTERIUM EXCHANGE REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 750 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : VNMRS; INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : FELIX 2007, SPARKY 3.115, PSVS REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 11 -73.39 -58.60 REMARK 500 1 LEU A 12 -61.93 -91.38 REMARK 500 1 ALA A 14 95.92 -163.01 REMARK 500 1 THR A 16 51.12 -108.80 REMARK 500 1 GLN A 17 -64.50 -174.85 REMARK 500 1 SER A 21 -79.05 -98.92 REMARK 500 1 MET A 22 28.51 -157.03 REMARK 500 1 ASN A 33 5.18 49.11 REMARK 500 1 LEU A 69 -66.97 -103.73 REMARK 500 1 MET A 73 85.55 -62.56 REMARK 500 1 PRO A 75 -156.08 -78.10 REMARK 500 1 ASN A 83 -72.92 -65.71 REMARK 500 2 ALA A 2 70.09 61.24 REMARK 500 2 HIS A 3 89.99 -60.16 REMARK 500 2 LEU A 12 -92.90 -82.87 REMARK 500 2 SER A 21 -66.70 -176.55 REMARK 500 2 ASP A 23 -71.62 -74.87 REMARK 500 2 ASN A 33 21.70 35.12 REMARK 500 2 LEU A 69 -67.79 -104.02 REMARK 500 2 MET A 73 75.97 -66.80 REMARK 500 2 PRO A 75 -157.24 -66.65 REMARK 500 2 HIS A 85 106.27 -37.16 REMARK 500 2 ALA A 93 -142.39 -96.50 REMARK 500 2 VAL A 94 60.90 -115.99 REMARK 500 3 ALA A 2 87.36 -154.05 REMARK 500 3 HIS A 3 89.95 -65.24 REMARK 500 3 THR A 11 -59.29 -149.08 REMARK 500 3 LEU A 12 -113.80 -145.33 REMARK 500 3 ALA A 14 1.00 172.97 REMARK 500 3 THR A 16 22.62 -140.46 REMARK 500 3 ASN A 33 6.16 44.88 REMARK 500 3 LEU A 69 -66.13 -103.54 REMARK 500 3 MET A 73 72.23 -67.08 REMARK 500 3 PRO A 75 -169.70 -65.93 REMARK 500 3 GLN A 84 86.76 -65.18 REMARK 500 3 SER A 86 92.38 -62.82 REMARK 500 3 ILE A 90 83.75 55.55 REMARK 500 4 HIS A 3 -64.67 -122.09 REMARK 500 4 HIS A 5 99.05 -162.59 REMARK 500 4 THR A 11 161.81 57.39 REMARK 500 4 GLU A 13 15.27 59.04 REMARK 500 4 ASP A 23 -167.25 -112.60 REMARK 500 4 ASP A 24 -83.16 -139.58 REMARK 500 4 ASN A 33 13.38 35.43 REMARK 500 4 LEU A 69 -66.31 -103.59 REMARK 500 4 MET A 73 89.54 -62.06 REMARK 500 4 PRO A 75 -159.80 -73.10 REMARK 500 4 ALA A 93 171.30 -58.91 REMARK 500 4 VAL A 94 41.99 -80.18 REMARK 500 5 HIS A 3 46.05 -102.70 REMARK 500 REMARK 500 THIS ENTRY HAS 229 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: BUPSA.13472.B RELATED DB: TARGETTRACK REMARK 900 RELATED ID: 18255 RELATED DB: BMRB DBREF 2LPD A 22 95 UNP Q63U90 Q63U90_BURPS 1 74 SEQADV 2LPD MET A 1 UNP Q63U90 EXPRESSION TAG SEQADV 2LPD ALA A 2 UNP Q63U90 EXPRESSION TAG SEQADV 2LPD HIS A 3 UNP Q63U90 EXPRESSION TAG SEQADV 2LPD HIS A 4 UNP Q63U90 EXPRESSION TAG SEQADV 2LPD HIS A 5 UNP Q63U90 EXPRESSION TAG SEQADV 2LPD HIS A 6 UNP Q63U90 EXPRESSION TAG SEQADV 2LPD HIS A 7 UNP Q63U90 EXPRESSION TAG SEQADV 2LPD HIS A 8 UNP Q63U90 EXPRESSION TAG SEQADV 2LPD MET A 9 UNP Q63U90 EXPRESSION TAG SEQADV 2LPD GLY A 10 UNP Q63U90 EXPRESSION TAG SEQADV 2LPD THR A 11 UNP Q63U90 EXPRESSION TAG SEQADV 2LPD LEU A 12 UNP Q63U90 EXPRESSION TAG SEQADV 2LPD GLU A 13 UNP Q63U90 EXPRESSION TAG SEQADV 2LPD ALA A 14 UNP Q63U90 EXPRESSION TAG SEQADV 2LPD GLN A 15 UNP Q63U90 EXPRESSION TAG SEQADV 2LPD THR A 16 UNP Q63U90 EXPRESSION TAG SEQADV 2LPD GLN A 17 UNP Q63U90 EXPRESSION TAG SEQADV 2LPD GLY A 18 UNP Q63U90 EXPRESSION TAG SEQADV 2LPD PRO A 19 UNP Q63U90 EXPRESSION TAG SEQADV 2LPD GLY A 20 UNP Q63U90 EXPRESSION TAG SEQADV 2LPD SER A 21 UNP Q63U90 EXPRESSION TAG SEQRES 1 A 95 MET ALA HIS HIS HIS HIS HIS HIS MET GLY THR LEU GLU SEQRES 2 A 95 ALA GLN THR GLN GLY PRO GLY SER MET ASP ASP GLU LEU SEQRES 3 A 95 TYR PHE VAL VAL ARG ASN ASN GLU GLY GLN TYR SER VAL SEQRES 4 A 95 TRP MET ASP GLY ARG SER LEU PRO ALA GLY TRP GLU THR SEQRES 5 A 95 VAL GLY GLU PRO ALA THR LYS GLN GLN CYS LEU GLN ARG SEQRES 6 A 95 ILE GLU GLN LEU TRP THR ASP MET VAL PRO ALA SER VAL SEQRES 7 A 95 ARG GLU HIS LEU ASN GLN HIS SER GLY PRO GLY ILE ASP SEQRES 8 A 95 TYR ALA VAL ARG HELIX 1 1 THR A 58 GLN A 68 1 11 HELIX 2 2 ALA A 76 LEU A 82 1 7 SHEET 1 A 3 SER A 38 MET A 41 0 SHEET 2 A 3 TYR A 27 ARG A 31 -1 N PHE A 28 O TRP A 40 SHEET 3 A 3 GLU A 51 ALA A 57 -1 O GLU A 51 N ARG A 31 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1