HEADER TRANSFERASE 13-APR-12 2LRU TITLE SOLUTION STRUCTURE OF THE WNK1 AUTOINHIBITORY DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE WNK1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 480-572; COMPND 5 SYNONYM: PROTEIN KINASE LYSINE-DEFICIENT 1, PROTEIN KINASE WITH NO COMPND 6 LYSINE 1; COMPND 7 EC: 2.7.11.1; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: BROWN RAT,RAT,RATS; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: WNK1, HSN2, PRKWNK1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PHIS-PARALLEL KEYWDS AUTOINHIBITORY DOMAIN, PF2 DOMAIN, TRANSFERASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.M.MOON,F.CORREA,K.H.GARDNER,E.J.GOLDSMITH REVDAT 4 14-JUN-23 2LRU 1 SEQADV REVDAT 3 24-APR-13 2LRU 1 JRNL REVDAT 2 20-FEB-13 2LRU 1 JRNL REVDAT 1 23-MAY-12 2LRU 0 JRNL AUTH T.M.MOON,F.CORREA,L.N.KINCH,A.T.PIALA,K.H.GARDNER, JRNL AUTH 2 E.J.GOLDSMITH JRNL TITL SOLUTION STRUCTURE OF THE WNK1 AUTOINHIBITORY DOMAIN, A JRNL TITL 2 WNK-SPECIFIC PF2 DOMAIN. JRNL REF J.MOL.BIOL. V. 425 1245 2013 JRNL REFN ISSN 0022-2836 JRNL PMID 23376100 JRNL DOI 10.1016/J.JMB.2013.01.031 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRVIEW, ARIA REMARK 3 AUTHORS : JOHNSON, ONE MOON SCIENTIFIC (NMRVIEW), LINGE, REMARK 3 O'DONOGHUE AND NILGES (ARIA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE AUTHORS STATE THAT TWO PROTONS REMARK 3 (TYR516 HYDROXYL, CYS 547 BACKBONE AMIDE) ARE CLASHING IN 1 REMARK 3 MODEL OF THE 20, AND ARE CLOSE IN 6/20. WHILE WE HAVE NOT BEEN REMARK 3 ABLE TO DIRECTLY ASSIGN THE CHEMICAL SHIFTS OF THAT HYDROXYL REMARK 3 PROTON GIVEN THE DIFFICULTIES OF EXCHANGE AT THIS SITE, WE REMARK 3 BELIEVE THAT OUR EXISTING NMR DATA ARE CONSISTENT WITH REMARK 3 ARRANGEMENT INDICATING A LIKELY H-BOND BETWEEN THE CYS 547 AMIDE REMARK 3 PROTON AND TYR 516 HYDROXYL OXYGEN. REMARK 4 REMARK 4 2LRU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-APR-12. REMARK 100 THE DEPOSITION ID IS D_1000102754. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 308 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 0.010 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.65 MM [U-100% 13C; U-100% 15N] REMARK 210 WNKAI, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HCCH-TOCSY; REMARK 210 3D CBCA(CO)NH; 3D HNCO; 3D REMARK 210 HNCACB; 3D H(CCO)NH; 3D C(CO)NH; REMARK 210 3D 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, ARIA REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 500 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 479 57.68 -63.07 REMARK 500 1 GLN A 480 -62.61 -94.93 REMARK 500 1 ASP A 494 14.35 -153.21 REMARK 500 1 ASP A 518 37.02 -81.28 REMARK 500 1 ASN A 519 36.01 -163.95 REMARK 500 2 PRO A 479 75.33 -68.20 REMARK 500 2 GLN A 480 -56.29 -141.81 REMARK 500 2 GLU A 491 -164.72 -127.72 REMARK 500 2 ASP A 494 22.77 -161.05 REMARK 500 2 ASP A 518 36.58 -79.73 REMARK 500 2 ASN A 519 46.42 -171.18 REMARK 500 3 PRO A 479 52.67 -62.31 REMARK 500 3 GLU A 491 -157.01 -114.90 REMARK 500 3 ASP A 494 21.35 -147.65 REMARK 500 3 ASP A 518 36.27 -80.32 REMARK 500 3 ASN A 519 40.09 -177.42 REMARK 500 3 GLU A 570 -77.80 -77.36 REMARK 500 4 PRO A 479 -8.78 -50.44 REMARK 500 4 GLN A 480 65.10 -117.35 REMARK 500 4 THR A 483 87.56 64.02 REMARK 500 4 ASP A 494 46.58 -140.69 REMARK 500 4 ASP A 518 37.19 -79.46 REMARK 500 4 ASN A 519 24.89 -164.13 REMARK 500 5 PRO A 479 56.16 -61.10 REMARK 500 5 GLU A 481 121.33 -176.33 REMARK 500 5 GLU A 482 -57.06 -152.13 REMARK 500 5 ASP A 494 88.24 -151.79 REMARK 500 5 GLU A 496 42.60 -165.76 REMARK 500 5 ASN A 519 41.08 -167.49 REMARK 500 6 MET A 477 -72.44 71.95 REMARK 500 6 PRO A 479 86.74 -42.39 REMARK 500 6 GLU A 481 39.15 -160.50 REMARK 500 6 GLU A 482 -79.65 62.68 REMARK 500 6 ASP A 494 98.84 -174.72 REMARK 500 6 ASP A 518 37.22 -77.87 REMARK 500 6 ASN A 519 33.58 -166.63 REMARK 500 7 PRO A 479 123.24 -39.48 REMARK 500 7 GLU A 492 76.41 -102.32 REMARK 500 7 ASP A 494 19.41 -142.54 REMARK 500 7 LYS A 513 75.93 -112.54 REMARK 500 7 ASP A 518 37.11 -76.74 REMARK 500 7 ASN A 519 28.09 -166.66 REMARK 500 8 MET A 477 -72.82 68.89 REMARK 500 8 PRO A 479 82.94 -48.30 REMARK 500 8 GLU A 481 77.40 56.83 REMARK 500 8 GLU A 491 -169.27 -127.65 REMARK 500 8 ASP A 518 37.52 -82.64 REMARK 500 8 ASN A 519 26.04 -167.03 REMARK 500 9 PRO A 479 92.98 -60.72 REMARK 500 9 GLN A 480 -63.59 -130.87 REMARK 500 REMARK 500 THIS ENTRY HAS 114 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18398 RELATED DB: BMRB DBREF 2LRU A 480 572 UNP Q9JIH7 WNK1_RAT 480 572 SEQADV 2LRU GLY A 475 UNP Q9JIH7 EXPRESSION TAG SEQADV 2LRU ALA A 476 UNP Q9JIH7 EXPRESSION TAG SEQADV 2LRU MET A 477 UNP Q9JIH7 EXPRESSION TAG SEQADV 2LRU ASP A 478 UNP Q9JIH7 EXPRESSION TAG SEQADV 2LRU PRO A 479 UNP Q9JIH7 EXPRESSION TAG SEQRES 1 A 98 GLY ALA MET ASP PRO GLN GLU GLU THR GLY VAL ARG VAL SEQRES 2 A 98 GLU LEU ALA GLU GLU ASP ASP GLY GLU LYS ILE ALA ILE SEQRES 3 A 98 LYS LEU TRP LEU ARG ILE GLU ASP ILE LYS LYS LEU LYS SEQRES 4 A 98 GLY LYS TYR LYS ASP ASN GLU ALA ILE GLU PHE SER PHE SEQRES 5 A 98 ASP LEU GLU ARG ASP VAL PRO GLU ASP VAL ALA GLN GLU SEQRES 6 A 98 MET VAL GLU SER GLY TYR VAL CYS GLU GLY ASP HIS LYS SEQRES 7 A 98 THR MET ALA LYS ALA ILE LYS ASP ARG VAL SER LEU ILE SEQRES 8 A 98 LYS ARG LYS ARG GLU GLN ARG HELIX 1 1 VAL A 532 SER A 543 1 12 HELIX 2 2 CYS A 547 GLY A 549 5 3 HELIX 3 3 ASP A 550 ARG A 569 1 20 SHEET 1 A 3 VAL A 485 LEU A 489 0 SHEET 2 A 3 ALA A 499 ILE A 506 -1 O ARG A 505 N ARG A 486 SHEET 3 A 3 ALA A 521 ASP A 527 -1 O PHE A 524 N LEU A 502 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1