data_2LSI # _entry.id 2LSI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2LSI pdb_00002lsi 10.2210/pdb2lsi/pdb RCSB RCSB102778 ? ? BMRB 18432 ? ? WWPDB D_1000102778 ? ? # _pdbx_database_related.db_id 18432 _pdbx_database_related.db_name BMRB _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2LSI _pdbx_database_status.methods_development_category ? _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2012-05-01 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Liu, D.' 1 'Ryu, K.' 2 'Ko, J.' 3 'Choi, B.' 4 # _citation.id primary _citation.title ;Insights into the scaffold mechanism of human Rev1 in translesional synthesis revealed by the structural studies on its polymerase-interacting domain ; _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Liu, D.' 1 ? primary 'Ryu, K.' 2 ? primary 'Ko, J.' 3 ? primary 'Choi, B.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA repair protein REV1' 11449.201 1 2.7.7.- ? 'Protein interaction domain, UNP RESIDUES 1156-1251' ? 2 polymer syn 'DNA polymerase kappa' 2159.493 1 2.7.7.7 ? 'UNP RESIDUES 562-577' ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Alpha integrin-binding protein 80, AIBP80, Rev1-like terminal deoxycytidyl transferase' 2 'DINB protein, DINP' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GHMAPNLAGAVEFNDVKTLLREWITTISDPMEEDILQVVKYCTDLIEEKDLEKLDLVIKYMKRLMQQSVESVWNMAFDFI LDNVQVVLQQTYGSTLKVT ; ;GHMAPNLAGAVEFNDVKTLLREWITTISDPMEEDILQVVKYCTDLIEEKDLEKLDLVIKYMKRLMQQSVESVWNMAFDFI LDNVQVVLQQTYGSTLKVT ; A ? 2 'polypeptide(L)' no no GSHKKSFFDKKRSERKW GSHKKSFFDKKRSERKW B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 HIS n 1 3 MET n 1 4 ALA n 1 5 PRO n 1 6 ASN n 1 7 LEU n 1 8 ALA n 1 9 GLY n 1 10 ALA n 1 11 VAL n 1 12 GLU n 1 13 PHE n 1 14 ASN n 1 15 ASP n 1 16 VAL n 1 17 LYS n 1 18 THR n 1 19 LEU n 1 20 LEU n 1 21 ARG n 1 22 GLU n 1 23 TRP n 1 24 ILE n 1 25 THR n 1 26 THR n 1 27 ILE n 1 28 SER n 1 29 ASP n 1 30 PRO n 1 31 MET n 1 32 GLU n 1 33 GLU n 1 34 ASP n 1 35 ILE n 1 36 LEU n 1 37 GLN n 1 38 VAL n 1 39 VAL n 1 40 LYS n 1 41 TYR n 1 42 CYS n 1 43 THR n 1 44 ASP n 1 45 LEU n 1 46 ILE n 1 47 GLU n 1 48 GLU n 1 49 LYS n 1 50 ASP n 1 51 LEU n 1 52 GLU n 1 53 LYS n 1 54 LEU n 1 55 ASP n 1 56 LEU n 1 57 VAL n 1 58 ILE n 1 59 LYS n 1 60 TYR n 1 61 MET n 1 62 LYS n 1 63 ARG n 1 64 LEU n 1 65 MET n 1 66 GLN n 1 67 GLN n 1 68 SER n 1 69 VAL n 1 70 GLU n 1 71 SER n 1 72 VAL n 1 73 TRP n 1 74 ASN n 1 75 MET n 1 76 ALA n 1 77 PHE n 1 78 ASP n 1 79 PHE n 1 80 ILE n 1 81 LEU n 1 82 ASP n 1 83 ASN n 1 84 VAL n 1 85 GLN n 1 86 VAL n 1 87 VAL n 1 88 LEU n 1 89 GLN n 1 90 GLN n 1 91 THR n 1 92 TYR n 1 93 GLY n 1 94 SER n 1 95 THR n 1 96 LEU n 1 97 LYS n 1 98 VAL n 1 99 THR n 2 1 GLY n 2 2 SER n 2 3 HIS n 2 4 LYS n 2 5 LYS n 2 6 SER n 2 7 PHE n 2 8 PHE n 2 9 ASP n 2 10 LYS n 2 11 LYS n 2 12 ARG n 2 13 SER n 2 14 GLU n 2 15 ARG n 2 16 LYS n 2 17 TRP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'REV1, REV1L' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type vector _entity_src_gen.pdbx_host_org_vector pET28a _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details 'The peptide was chemically synthesized.' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP REV1_HUMAN Q9UBZ9 1 ;APNLAGAVEFNDVKTLLREWITTISDPMEEDILQVVKYCTDLIEEKDLEKLDLVIKYMKRLMQQSVESVWNMAFDFILDN VQVVLQQTYGSTLKVT ; 1156 ? 2 UNP POLK_HUMAN Q9UBT6 2 SHKKSFFDKKRSERKW 562 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2LSI A 4 ? 99 ? Q9UBZ9 1156 ? 1251 ? 1156 1251 2 2 2LSI B 2 ? 17 ? Q9UBT6 562 ? 577 ? 562 577 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2LSI GLY A 1 ? UNP Q9UBZ9 ? ? 'expression tag' 1153 1 1 2LSI HIS A 2 ? UNP Q9UBZ9 ? ? 'expression tag' 1154 2 1 2LSI MET A 3 ? UNP Q9UBZ9 ? ? 'expression tag' 1155 3 2 2LSI GLY B 1 ? UNP Q9UBT6 ? ? 'expression tag' 561 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '3D 1H-13C NOESY aromatic' 1 2 1 '3D 1H-13C NOESY aliphatic' 1 3 1 '3D 1H-15N NOESY' 1 4 1 '3D HCCH-TOCSY' 1 5 1 '3D H(CCO)NH' 1 6 1 '3D CBCA(CO)NH' 1 7 1 '3D HNCACB' 1 8 1 '3D HNCO' 1 9 1 '3D HBHA(CO)NH' 1 10 1 '3D HCCH-COSY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.1 _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents '0.8mM [U-99% 13C; U-99% 15N] entity-1, 50mM Bis-Tris-2, 100 mM NaCl-3, 1mM DTT-4, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 800 Bruker AVANCE 1 'Bruker Avance' 900 Bruker AVANCE 2 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2LSI _pdbx_nmr_refine.method 'simulated annealing, explicit water refinement' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 15 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2LSI _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.representative_conformer 1 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2LSI _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.ordinal _pdbx_nmr_software.version 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 'data analysis' NMRPipe 1 ? ? refinement Xplor 2 ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2LSI _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2LSI _struct.title 'Solution structure of polymerase-interacting domain of human Rev1 in complex with translesional synthesis polymerase kappa' _struct.pdbx_model_details 'lowest energy, model1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2LSI _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'polymerase-interacting domain, Rev1, polymerase kappa, Rev1-interacting motif, TRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 12 ? ILE A 27 ? GLU A 1164 ILE A 1179 1 ? 16 HELX_P HELX_P2 2 MET A 31 ? GLU A 48 ? MET A 1183 GLU A 1200 1 ? 18 HELX_P HELX_P3 3 ASP A 50 ? SER A 68 ? ASP A 1202 SER A 1220 1 ? 19 HELX_P HELX_P4 4 GLU A 70 ? TYR A 92 ? GLU A 1222 TYR A 1244 1 ? 23 HELX_P HELX_P5 5 SER B 6 ? ARG B 15 ? SER B 566 ARG B 575 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 2LSI _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1153 1153 GLY GLY A . n A 1 2 HIS 2 1154 1154 HIS HIS A . n A 1 3 MET 3 1155 1155 MET MET A . n A 1 4 ALA 4 1156 1156 ALA ALA A . n A 1 5 PRO 5 1157 1157 PRO PRO A . n A 1 6 ASN 6 1158 1158 ASN ASN A . n A 1 7 LEU 7 1159 1159 LEU LEU A . n A 1 8 ALA 8 1160 1160 ALA ALA A . n A 1 9 GLY 9 1161 1161 GLY GLY A . n A 1 10 ALA 10 1162 1162 ALA ALA A . n A 1 11 VAL 11 1163 1163 VAL VAL A . n A 1 12 GLU 12 1164 1164 GLU GLU A . n A 1 13 PHE 13 1165 1165 PHE PHE A . n A 1 14 ASN 14 1166 1166 ASN ASN A . n A 1 15 ASP 15 1167 1167 ASP ASP A . n A 1 16 VAL 16 1168 1168 VAL VAL A . n A 1 17 LYS 17 1169 1169 LYS LYS A . n A 1 18 THR 18 1170 1170 THR THR A . n A 1 19 LEU 19 1171 1171 LEU LEU A . n A 1 20 LEU 20 1172 1172 LEU LEU A . n A 1 21 ARG 21 1173 1173 ARG ARG A . n A 1 22 GLU 22 1174 1174 GLU GLU A . n A 1 23 TRP 23 1175 1175 TRP TRP A . n A 1 24 ILE 24 1176 1176 ILE ILE A . n A 1 25 THR 25 1177 1177 THR THR A . n A 1 26 THR 26 1178 1178 THR THR A . n A 1 27 ILE 27 1179 1179 ILE ILE A . n A 1 28 SER 28 1180 1180 SER SER A . n A 1 29 ASP 29 1181 1181 ASP ASP A . n A 1 30 PRO 30 1182 1182 PRO PRO A . n A 1 31 MET 31 1183 1183 MET MET A . n A 1 32 GLU 32 1184 1184 GLU GLU A . n A 1 33 GLU 33 1185 1185 GLU GLU A . n A 1 34 ASP 34 1186 1186 ASP ASP A . n A 1 35 ILE 35 1187 1187 ILE ILE A . n A 1 36 LEU 36 1188 1188 LEU LEU A . n A 1 37 GLN 37 1189 1189 GLN GLN A . n A 1 38 VAL 38 1190 1190 VAL VAL A . n A 1 39 VAL 39 1191 1191 VAL VAL A . n A 1 40 LYS 40 1192 1192 LYS LYS A . n A 1 41 TYR 41 1193 1193 TYR TYR A . n A 1 42 CYS 42 1194 1194 CYS CYS A . n A 1 43 THR 43 1195 1195 THR THR A . n A 1 44 ASP 44 1196 1196 ASP ASP A . n A 1 45 LEU 45 1197 1197 LEU LEU A . n A 1 46 ILE 46 1198 1198 ILE ILE A . n A 1 47 GLU 47 1199 1199 GLU GLU A . n A 1 48 GLU 48 1200 1200 GLU GLU A . n A 1 49 LYS 49 1201 1201 LYS LYS A . n A 1 50 ASP 50 1202 1202 ASP ASP A . n A 1 51 LEU 51 1203 1203 LEU LEU A . n A 1 52 GLU 52 1204 1204 GLU GLU A . n A 1 53 LYS 53 1205 1205 LYS LYS A . n A 1 54 LEU 54 1206 1206 LEU LEU A . n A 1 55 ASP 55 1207 1207 ASP ASP A . n A 1 56 LEU 56 1208 1208 LEU LEU A . n A 1 57 VAL 57 1209 1209 VAL VAL A . n A 1 58 ILE 58 1210 1210 ILE ILE A . n A 1 59 LYS 59 1211 1211 LYS LYS A . n A 1 60 TYR 60 1212 1212 TYR TYR A . n A 1 61 MET 61 1213 1213 MET MET A . n A 1 62 LYS 62 1214 1214 LYS LYS A . n A 1 63 ARG 63 1215 1215 ARG ARG A . n A 1 64 LEU 64 1216 1216 LEU LEU A . n A 1 65 MET 65 1217 1217 MET MET A . n A 1 66 GLN 66 1218 1218 GLN GLN A . n A 1 67 GLN 67 1219 1219 GLN GLN A . n A 1 68 SER 68 1220 1220 SER SER A . n A 1 69 VAL 69 1221 1221 VAL VAL A . n A 1 70 GLU 70 1222 1222 GLU GLU A . n A 1 71 SER 71 1223 1223 SER SER A . n A 1 72 VAL 72 1224 1224 VAL VAL A . n A 1 73 TRP 73 1225 1225 TRP TRP A . n A 1 74 ASN 74 1226 1226 ASN ASN A . n A 1 75 MET 75 1227 1227 MET MET A . n A 1 76 ALA 76 1228 1228 ALA ALA A . n A 1 77 PHE 77 1229 1229 PHE PHE A . n A 1 78 ASP 78 1230 1230 ASP ASP A . n A 1 79 PHE 79 1231 1231 PHE PHE A . n A 1 80 ILE 80 1232 1232 ILE ILE A . n A 1 81 LEU 81 1233 1233 LEU LEU A . n A 1 82 ASP 82 1234 1234 ASP ASP A . n A 1 83 ASN 83 1235 1235 ASN ASN A . n A 1 84 VAL 84 1236 1236 VAL VAL A . n A 1 85 GLN 85 1237 1237 GLN GLN A . n A 1 86 VAL 86 1238 1238 VAL VAL A . n A 1 87 VAL 87 1239 1239 VAL VAL A . n A 1 88 LEU 88 1240 1240 LEU LEU A . n A 1 89 GLN 89 1241 1241 GLN GLN A . n A 1 90 GLN 90 1242 1242 GLN GLN A . n A 1 91 THR 91 1243 1243 THR THR A . n A 1 92 TYR 92 1244 1244 TYR TYR A . n A 1 93 GLY 93 1245 1245 GLY GLY A . n A 1 94 SER 94 1246 1246 SER SER A . n A 1 95 THR 95 1247 1247 THR THR A . n A 1 96 LEU 96 1248 1248 LEU LEU A . n A 1 97 LYS 97 1249 1249 LYS LYS A . n A 1 98 VAL 98 1250 1250 VAL VAL A . n A 1 99 THR 99 1251 1251 THR THR A . n B 2 1 GLY 1 561 561 GLY GLY B . n B 2 2 SER 2 562 562 SER SER B . n B 2 3 HIS 3 563 563 HIS HIS B . n B 2 4 LYS 4 564 564 LYS LYS B . n B 2 5 LYS 5 565 565 LYS LYS B . n B 2 6 SER 6 566 566 SER SER B . n B 2 7 PHE 7 567 567 PHE PHE B . n B 2 8 PHE 8 568 568 PHE PHE B . n B 2 9 ASP 9 569 569 ASP ASP B . n B 2 10 LYS 10 570 570 LYS LYS B . n B 2 11 LYS 11 571 571 LYS LYS B . n B 2 12 ARG 12 572 572 ARG ARG B . n B 2 13 SER 13 573 573 SER SER B . n B 2 14 GLU 14 574 574 GLU GLU B . n B 2 15 ARG 15 575 575 ARG ARG B . n B 2 16 LYS 16 576 576 LYS LYS B . n B 2 17 TRP 17 577 577 TRP TRP B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-05-29 2 'Structure model' 1 1 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' database_2 2 2 'Structure model' pdbx_database_status 3 2 'Structure model' pdbx_nmr_spectrometer 4 2 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 2 'Structure model' '_pdbx_nmr_spectrometer.model' 5 2 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id entity-1 0.8 ? mM '[U-99% 13C; U-99% 15N]' 1 Bis-Tris-2 50 ? mM ? 1 NaCl-3 100 ? mM ? 1 DTT-4 1 ? mM ? 1 # _pdbx_nmr_constraints.disulfide_bond_constraints_total_count ? _pdbx_nmr_constraints.entry_id 2LSI _pdbx_nmr_constraints.hydrogen_bond_constraints_total_count ? _pdbx_nmr_constraints.NA_alpha-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_beta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_chi-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_delta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_epsilon-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_gamma-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_other-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_sugar_pucker_constraints_total_count ? _pdbx_nmr_constraints.NOE_constraints_total ? _pdbx_nmr_constraints.NOE_interentity_total_count ? _pdbx_nmr_constraints.NOE_interproton_distance_evaluation ? _pdbx_nmr_constraints.NOE_intraresidue_total_count ? _pdbx_nmr_constraints.NOE_long_range_total_count ? _pdbx_nmr_constraints.NOE_medium_range_total_count ? _pdbx_nmr_constraints.NOE_motional_averaging_correction ? _pdbx_nmr_constraints.NOE_pseudoatom_corrections ? _pdbx_nmr_constraints.NOE_sequential_total_count ? _pdbx_nmr_constraints.protein_chi_angle_constraints_total_count 0 _pdbx_nmr_constraints.protein_other_angle_constraints_total_count 0 _pdbx_nmr_constraints.protein_phi_angle_constraints_total_count 92 _pdbx_nmr_constraints.protein_psi_angle_constraints_total_count 92 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HZ3 B LYS 570 ? ? OE1 B GLU 574 ? ? 1.59 2 1 HZ3 A LYS 1214 ? ? OXT A THR 1251 ? ? 1.60 3 3 OD1 A ASP 1186 ? ? HG B SER 566 ? ? 1.58 4 4 OD1 A ASP 1186 ? ? HG B SER 566 ? ? 1.60 5 5 OD1 A ASP 1167 ? ? HH12 B ARG 575 ? ? 1.59 6 9 HZ3 A LYS 1214 ? ? O A THR 1251 ? ? 1.60 7 10 OD2 A ASP 1167 ? ? HH12 B ARG 575 ? ? 1.59 8 13 OD2 A ASP 1181 ? ? HZ3 B LYS 564 ? ? 1.56 9 13 HD1 A HIS 1154 ? ? OE2 A GLU 1200 ? ? 1.59 10 14 HZ1 A LYS 1214 ? ? OXT A THR 1251 ? ? 1.59 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 1157 ? ? -57.34 107.53 2 1 VAL A 1221 ? ? 44.52 -20.93 3 2 THR A 1243 ? ? -90.36 -61.87 4 2 LYS B 564 ? ? 67.55 -176.65 5 3 ALA A 1160 ? ? 58.42 18.90 6 3 ASP A 1202 ? ? -101.93 74.12 7 3 VAL A 1221 ? ? 41.06 -9.23 8 3 LYS B 564 ? ? 60.93 178.04 9 3 LYS B 565 ? ? 72.65 134.62 10 3 ARG B 575 ? ? -116.53 73.12 11 4 PRO A 1157 ? ? -41.35 109.14 12 4 ALA A 1160 ? ? 59.50 13.29 13 4 ASP A 1202 ? ? -100.34 78.33 14 4 VAL A 1221 ? ? 46.79 -27.94 15 4 LYS B 564 ? ? 67.25 -60.90 16 4 LYS B 565 ? ? 60.86 164.16 17 5 ALA A 1160 ? ? 58.90 18.86 18 5 VAL A 1221 ? ? 39.86 -0.24 19 5 HIS B 563 ? ? 66.47 -173.16 20 5 LYS B 576 ? ? -102.06 74.34 21 6 VAL A 1221 ? ? 48.01 -29.18 22 7 THR A 1243 ? ? -90.21 -61.64 23 7 HIS B 563 ? ? -146.05 -75.65 24 7 LYS B 564 ? ? 47.55 -154.17 25 7 ARG B 575 ? ? -94.81 53.31 26 8 ALA A 1160 ? ? 59.64 15.89 27 8 ASP A 1202 ? ? -100.26 77.18 28 8 VAL A 1221 ? ? 46.16 -18.80 29 8 THR A 1243 ? ? -90.13 -61.96 30 8 HIS B 563 ? ? 66.49 97.33 31 8 LYS B 576 ? ? -112.69 73.73 32 9 PRO A 1157 ? ? -40.48 108.09 33 9 ASP A 1202 ? ? -103.62 77.51 34 10 THR A 1243 ? ? -90.49 -61.54 35 10 LYS B 565 ? ? 69.24 89.57 36 10 LYS B 576 ? ? -112.31 64.77 37 11 ASP A 1202 ? ? -103.69 71.25 38 12 THR A 1243 ? ? -90.59 -62.15 39 12 LYS B 564 ? ? 69.71 120.27 40 13 ASP A 1202 ? ? -104.85 78.35 41 13 VAL A 1221 ? ? 46.14 -18.30 42 13 THR A 1243 ? ? -90.84 -60.85 43 13 LYS B 564 ? ? 69.58 135.89 44 14 THR A 1243 ? ? -90.80 -61.82 45 14 HIS B 563 ? ? -110.44 -82.42 46 14 ARG B 575 ? ? -110.16 -79.10 47 14 LYS B 576 ? ? 38.15 45.32 48 15 LYS B 564 ? ? 60.19 -171.57 49 15 ARG B 575 ? ? -81.11 33.91 #