HEADER CHAPERONE 02-MAY-12 2LSM TITLE SOLUTION STRUCTURE OF GPFI C-TERMINAL DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA-PACKAGING PROTEIN FI; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C-TERMINAL DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE LAMBDA; SOURCE 3 ORGANISM_TAXID: 10710; SOURCE 4 GENE: FI; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS GENE PRODUCT FI, PHAGE LAMBDA, DNA PACKAGING, CHAPERONE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.POPOVIC,B.WU,A.M.EDWARDS,A.R.DAVIDSON,K.L.MAXWELL REVDAT 3 14-JUN-23 2LSM 1 REMARK REVDAT 2 19-JUN-13 2LSM 1 JRNL REVDAT 1 25-JUL-12 2LSM 0 JRNL AUTH A.POPOVIC,B.WU,C.H.ARROWSMITH,A.M.EDWARDS,A.R.DAVIDSON, JRNL AUTH 2 K.L.MAXWELL JRNL TITL STRUCTURAL AND BIOCHEMICAL CHARACTERIZATION OF PHAGE LAMBDA JRNL TITL 2 FI PROTEIN (GPFI) REVEALS A NOVEL MECHANISM OF DNA PACKAGING JRNL TITL 3 CHAPERONE ACTIVITY. JRNL REF J.BIOL.CHEM. V. 287 32085 2012 JRNL REFN ISSN 0021-9258 JRNL PMID 22801427 JRNL DOI 10.1074/JBC.M112.378349 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE, CYANA_2.0 REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE), GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 (CYANA_2.0) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LSM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1000102782. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 250 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM [U-99% 13C; U-99% 15N] REMARK 210 POLYPEPTIDE, 25 MM SODIUM REMARK 210 PHOSPHATE, 250 MM SODIUM REMARK 210 CHLORIDE, 90% H2O/10% D2O; 1 MM REMARK 210 [U-100% 13C; U-100% 15N] REMARK 210 POLYPEPTIDE, 25 MM SODIUM REMARK 210 PHOSPHATE, 250 MM POTASSIUM REMARK 210 CHLORIDE, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D H(CCO)NH; 3D REMARK 210 HNCO; 3D HNCACB; 3D CBCA(CO)NH; REMARK 210 3D 1H-15N NOESY; 3D 1H-13C NOESY; REMARK 210 3D C(CO)NH REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA_2.0, SPARKY REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 73 25.89 -161.09 REMARK 500 1 LYS A 90 102.34 -53.05 REMARK 500 1 GLU A 102 103.60 -165.20 REMARK 500 1 PRO A 109 85.97 -69.76 REMARK 500 2 GLU A 81 81.52 -160.41 REMARK 500 2 LYS A 90 102.41 -53.03 REMARK 500 2 GLU A 102 103.64 -165.15 REMARK 500 2 PRO A 109 85.68 -69.73 REMARK 500 3 ASP A 73 25.19 -159.88 REMARK 500 3 SER A 80 58.73 -148.99 REMARK 500 3 LYS A 90 103.01 -53.08 REMARK 500 3 GLU A 102 102.98 -164.32 REMARK 500 3 PRO A 109 86.02 -69.75 REMARK 500 4 ASP A 73 -41.00 -160.04 REMARK 500 4 LYS A 90 105.23 -52.95 REMARK 500 4 GLU A 102 103.51 -165.28 REMARK 500 4 PRO A 109 85.65 -69.85 REMARK 500 5 ASP A 73 -38.99 -168.57 REMARK 500 5 ASP A 78 51.59 -140.20 REMARK 500 5 GLU A 81 63.93 -111.20 REMARK 500 5 LYS A 90 102.21 -53.02 REMARK 500 5 GLU A 102 104.00 -165.13 REMARK 500 5 PRO A 109 85.16 -69.73 REMARK 500 6 LYS A 90 102.16 -53.21 REMARK 500 6 GLU A 102 103.56 -165.29 REMARK 500 6 PRO A 109 85.76 -69.72 REMARK 500 7 ASP A 73 -68.20 -174.41 REMARK 500 7 LYS A 90 102.23 -52.95 REMARK 500 7 GLU A 102 103.69 -165.27 REMARK 500 7 PRO A 109 85.52 -69.85 REMARK 500 8 ASP A 73 -40.39 -162.82 REMARK 500 8 LYS A 90 103.83 -53.14 REMARK 500 8 GLU A 102 103.83 -164.30 REMARK 500 8 PRO A 109 85.64 -69.75 REMARK 500 9 ASP A 73 25.79 -161.28 REMARK 500 9 SER A 80 34.16 -143.28 REMARK 500 9 GLU A 81 56.59 -140.41 REMARK 500 9 LYS A 90 102.47 -53.14 REMARK 500 9 GLU A 102 103.54 -165.09 REMARK 500 9 PRO A 109 86.33 -69.77 REMARK 500 10 ASP A 73 -38.96 -168.57 REMARK 500 10 SER A 80 33.92 -147.94 REMARK 500 10 LYS A 90 102.10 -53.23 REMARK 500 10 GLU A 102 103.94 -165.20 REMARK 500 10 PRO A 109 84.52 -69.77 REMARK 500 11 ASP A 73 -40.09 -163.91 REMARK 500 11 LYS A 90 104.86 -53.38 REMARK 500 11 GLU A 102 103.80 -165.20 REMARK 500 11 PRO A 109 91.64 -69.82 REMARK 500 12 ASP A 73 -40.02 -164.68 REMARK 500 REMARK 500 THIS ENTRY HAS 100 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18437 RELATED DB: BMRB DBREF 2LSM A 72 132 UNP P03709 VPF1_LAMBD 72 132 SEQRES 1 A 61 PRO ASP THR VAL ILE LEU ASP THR SER GLU LEU VAL THR SEQRES 2 A 61 VAL VAL ALA LEU VAL LYS LEU HIS THR ASP ALA LEU HIS SEQRES 3 A 61 ALA THR ARG ASP GLU PRO VAL ALA PHE VAL LEU PRO GLY SEQRES 4 A 61 THR ALA PHE ARG VAL SER ALA GLY VAL ALA ALA GLU MET SEQRES 5 A 61 THR GLU ARG GLY LEU ALA ARG MET GLN HELIX 1 1 SER A 116 ARG A 126 1 11 SHEET 1 A 3 ALA A 112 VAL A 115 0 SHEET 2 A 3 VAL A 83 ALA A 87 -1 N VAL A 83 O VAL A 115 SHEET 3 A 3 ALA A 129 MET A 131 -1 O ARG A 130 N VAL A 86 SHEET 1 B 2 ALA A 95 LEU A 96 0 SHEET 2 B 2 PRO A 103 VAL A 104 -1 O VAL A 104 N ALA A 95 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1