HEADER METAL BINDING PROTEIN/DNA 15-MAY-12 2LT7 TITLE SOLUTION NMR STRUCTURE OF KAISO ZINC FINGER DNA BINDING DOMAIN IN TITLE 2 COMPLEX WITH KAISO BINDING SITE DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTIONAL REGULATOR KAISO; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ZINC FINGER DNA BINDING DOMAIN; COMPND 5 SYNONYM: ZINC FINGER AND BTB DOMAIN-CONTAINING PROTEIN 33; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (5'- COMPND 9 D(*GP*TP*GP*CP*TP*TP*CP*CP*TP*GP*CP*CP*AP*AP*TP*AP*AP*CP*G)-3'); COMPND 10 CHAIN: D; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA (5'- COMPND 14 D(*CP*GP*TP*TP*AP*TP*TP*GP*GP*CP*AP*GP*GP*AP*AP*GP*CP*AP*C)-3'); COMPND 15 CHAIN: E; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ZBTB33, KAISO, ZNF348; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)[DNAY]; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21D; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES KEYWDS ZINC FINGER, DOUBLE HELIX, METAL BINDING PROTEIN-DNA COMPLEX EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR B.A.BUCK-KOEHNTOP,R.L.STANFIELD,D.C.EKIERT,M.A.MARTINEZ-YAMOUT, AUTHOR 2 H.DYSON,I.A.WILSON,P.E.WRIGHT REVDAT 4 01-MAY-24 2LT7 1 REMARK LINK REVDAT 3 03-OCT-12 2LT7 1 JRNL REVDAT 2 19-SEP-12 2LT7 1 JRNL REVDAT 1 05-SEP-12 2LT7 0 JRNL AUTH B.A.BUCK-KOEHNTOP,R.L.STANFIELD,D.C.EKIERT, JRNL AUTH 2 M.A.MARTINEZ-YAMOUT,H.J.DYSON,I.A.WILSON,P.E.WRIGHT JRNL TITL MOLECULAR BASIS FOR RECOGNITION OF METHYLATED AND SPECIFIC JRNL TITL 2 DNA SEQUENCES BY THE ZINC FINGER PROTEIN KAISO. JRNL REF PROC.NATL.ACAD.SCI.USA V. 109 15229 2012 JRNL REFN ISSN 0027-8424 JRNL PMID 22949637 JRNL DOI 10.1073/PNAS.1213726109 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : AMBER REMARK 3 AUTHORS : CASE, DARDEN, CHEATHAM, III, SIMMERLING, WANG, REMARK 3 DUKE, LUO, ... AND KOLLMAN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LT7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1000102803. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 500 UM [U-13C; U-15N] KAISO, 500 REMARK 210 UM KAISO BINDING SEQUENCE (KBS), REMARK 210 10 MM TRIS, 1 MM TCEP, 95% H2O/5% REMARK 210 D2O; 500 UM [U-100% 13C; U-100% REMARK 210 15N; U-80% 2H] KAISO, 500 UM REMARK 210 KAISO BINDING SEQUENCE (KBS), 10 REMARK 210 MM TRIS, 1 MM TCEP, 95% H2O/5% REMARK 210 D2O; 500 UM [U-13C; U-15N] KAISO, REMARK 210 500 UM KAISO BINDING SEQUENCE REMARK 210 (KBS), 10 MM TRIS, 1 MM TCEP, REMARK 210 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D HNCO; 3D HNCA; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D HN(CO)CA; 3D HCCH- REMARK 210 COSY; 3D CBCGCD; 3D 1H-15N NOESY; REMARK 210 3D 1H-13C NOESY; 2D 1H-1H NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ; 800 MHZ; 900 REMARK 210 MHZ; 750 MHZ REMARK 210 SPECTROMETER MODEL : DMX; DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA, NMRVIEW, NMRPIPE, TALOS REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH TYR A 550 OP2 DA E 30 1.58 REMARK 500 HG SER A 578 OP1 DG E 31 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 1 ARG A 475 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 1 ARG A 475 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 1 ARG A 501 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 1 VAL A 504 CA - CB - CG1 ANGL. DEV. = 9.2 DEGREES REMARK 500 1 ARG A 510 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 1 ARG A 549 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 1 ARG A 595 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 1 DC D 7 O4' - C4' - C3' ANGL. DEV. = 3.6 DEGREES REMARK 500 1 DG E 27 C1' - O4' - C4' ANGL. DEV. = -6.2 DEGREES REMARK 500 1 DG E 27 C3' - C2' - C1' ANGL. DEV. = -7.5 DEGREES REMARK 500 1 DC E 29 O4' - C4' - C3' ANGL. DEV. = 3.8 DEGREES REMARK 500 2 TYR A 493 CB - CG - CD2 ANGL. DEV. = -3.9 DEGREES REMARK 500 2 ARG A 501 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 2 ARG A 510 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 2 ARG A 511 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 2 TYR A 536 CB - CG - CD2 ANGL. DEV. = -4.3 DEGREES REMARK 500 2 ARG A 590 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 2 DG E 27 C1' - O4' - C4' ANGL. DEV. = -6.4 DEGREES REMARK 500 2 DG E 27 C3' - C2' - C1' ANGL. DEV. = -6.9 DEGREES REMARK 500 3 TYR A 493 CB - CG - CD2 ANGL. DEV. = -4.2 DEGREES REMARK 500 3 ARG A 501 NE - CZ - NH1 ANGL. DEV. = 4.7 DEGREES REMARK 500 3 VAL A 504 CA - CB - CG1 ANGL. DEV. = 9.3 DEGREES REMARK 500 3 ARG A 549 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 3 ARG A 549 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 3 DC D 7 O4' - C4' - C3' ANGL. DEV. = 3.6 DEGREES REMARK 500 3 DT D 9 C3' - C2' - C1' ANGL. DEV. = -5.7 DEGREES REMARK 500 3 DG E 27 C1' - O4' - C4' ANGL. DEV. = -6.3 DEGREES REMARK 500 3 DG E 27 C3' - C2' - C1' ANGL. DEV. = -7.0 DEGREES REMARK 500 4 ARG A 475 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 4 ARG A 501 NE - CZ - NH1 ANGL. DEV. = 4.7 DEGREES REMARK 500 4 VAL A 504 CA - CB - CG1 ANGL. DEV. = 9.4 DEGREES REMARK 500 4 ARG A 510 NE - CZ - NH1 ANGL. DEV. = 4.7 DEGREES REMARK 500 4 ARG A 511 NE - CZ - NH1 ANGL. DEV. = 5.5 DEGREES REMARK 500 4 ARG A 511 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 4 ARG A 549 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 4 ARG A 590 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 4 DT D 9 C3' - C2' - C1' ANGL. DEV. = -4.9 DEGREES REMARK 500 4 DG E 27 C1' - O4' - C4' ANGL. DEV. = -6.5 DEGREES REMARK 500 4 DG E 27 C3' - C2' - C1' ANGL. DEV. = -7.6 DEGREES REMARK 500 4 DG E 31 C1' - O4' - C4' ANGL. DEV. = -6.5 DEGREES REMARK 500 5 ARG A 491 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 5 TYR A 493 CB - CG - CD2 ANGL. DEV. = -5.1 DEGREES REMARK 500 5 ARG A 501 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 5 ARG A 510 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 5 ARG A 511 NE - CZ - NH1 ANGL. DEV. = 5.3 DEGREES REMARK 500 5 ARG A 511 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 5 ARG A 595 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 5 DG E 27 C3' - C2' - C1' ANGL. DEV. = -7.1 DEGREES REMARK 500 6 ARG A 501 NE - CZ - NH1 ANGL. DEV. = 6.5 DEGREES REMARK 500 6 ARG A 511 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 166 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 477 68.51 -119.17 REMARK 500 1 LYS A 582 80.75 58.61 REMARK 500 1 SER A 601 -70.09 -54.19 REMARK 500 2 ARG A 475 108.72 -43.86 REMARK 500 2 ARG A 549 -41.97 -136.33 REMARK 500 2 LYS A 582 77.79 59.02 REMARK 500 3 ASP A 481 32.59 -91.39 REMARK 500 3 LYS A 582 71.68 59.39 REMARK 500 4 MET A 476 80.00 -158.12 REMARK 500 4 LYS A 477 49.97 -148.94 REMARK 500 4 LYS A 479 59.86 -162.17 REMARK 500 4 HIS A 480 79.94 -114.18 REMARK 500 4 ASP A 481 27.43 -150.42 REMARK 500 4 SER A 601 -70.01 -55.36 REMARK 500 5 VAL A 478 126.81 -171.37 REMARK 500 5 LYS A 479 137.25 -170.78 REMARK 500 5 HIS A 480 79.47 -158.61 REMARK 500 5 GLU A 528 32.25 -85.80 REMARK 500 5 LYS A 582 73.79 58.30 REMARK 500 6 LYS A 582 74.67 21.19 REMARK 500 7 ARG A 549 -60.83 -134.83 REMARK 500 7 LYS A 582 73.23 59.22 REMARK 500 8 MET A 476 79.93 -162.84 REMARK 500 8 ASP A 481 43.75 -81.20 REMARK 500 8 SER A 581 -60.06 -160.27 REMARK 500 8 LYS A 582 89.82 53.61 REMARK 500 9 LYS A 582 73.55 59.65 REMARK 500 10 LYS A 477 49.74 -145.07 REMARK 500 10 GLU A 547 98.89 -65.36 REMARK 500 11 LYS A 477 49.98 -143.81 REMARK 500 11 ARG A 549 -38.05 -136.18 REMARK 500 11 ARG A 590 -1.06 -147.14 REMARK 500 12 ARG A 549 -59.19 -123.76 REMARK 500 13 GLU A 528 30.29 -81.06 REMARK 500 13 LYS A 582 72.62 59.35 REMARK 500 14 LYS A 477 49.91 -140.56 REMARK 500 14 ASP A 481 42.92 -78.94 REMARK 500 14 LYS A 582 87.56 52.68 REMARK 500 15 GLU A 528 31.68 -79.80 REMARK 500 16 LYS A 477 81.37 -150.19 REMARK 500 16 LYS A 582 76.30 58.09 REMARK 500 16 SER A 601 -70.21 -60.83 REMARK 500 17 LYS A 477 49.87 -172.88 REMARK 500 17 LYS A 582 90.20 54.53 REMARK 500 17 SER A 601 7.10 -69.72 REMARK 500 18 LYS A 477 52.43 -156.53 REMARK 500 18 ASP A 481 47.55 -96.88 REMARK 500 18 ARG A 549 -53.98 -125.84 REMARK 500 18 LYS A 582 66.79 60.46 REMARK 500 19 MET A 476 79.97 -156.33 REMARK 500 REMARK 500 THIS ENTRY HAS 54 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 TYR A 484 0.08 SIDE CHAIN REMARK 500 1 ARG A 501 0.10 SIDE CHAIN REMARK 500 1 ARG A 595 0.09 SIDE CHAIN REMARK 500 1 DC D 18 0.08 SIDE CHAIN REMARK 500 1 DG D 19 0.06 SIDE CHAIN REMARK 500 1 DG E 21 0.05 SIDE CHAIN REMARK 500 1 DT E 26 0.10 SIDE CHAIN REMARK 500 1 DG E 27 0.06 SIDE CHAIN REMARK 500 1 DA E 30 0.08 SIDE CHAIN REMARK 500 1 DA E 33 0.06 SIDE CHAIN REMARK 500 1 DA E 34 0.05 SIDE CHAIN REMARK 500 2 TYR A 484 0.08 SIDE CHAIN REMARK 500 2 ARG A 595 0.10 SIDE CHAIN REMARK 500 2 DC D 8 0.07 SIDE CHAIN REMARK 500 2 DA D 17 0.09 SIDE CHAIN REMARK 500 2 DC D 18 0.14 SIDE CHAIN REMARK 500 2 DG D 19 0.07 SIDE CHAIN REMARK 500 2 DT E 23 0.06 SIDE CHAIN REMARK 500 2 DT E 26 0.08 SIDE CHAIN REMARK 500 3 TYR A 484 0.07 SIDE CHAIN REMARK 500 3 ARG A 501 0.09 SIDE CHAIN REMARK 500 3 TYR A 562 0.10 SIDE CHAIN REMARK 500 3 ARG A 595 0.10 SIDE CHAIN REMARK 500 3 TYR A 599 0.07 SIDE CHAIN REMARK 500 3 DT E 26 0.11 SIDE CHAIN REMARK 500 3 DC E 29 0.09 SIDE CHAIN REMARK 500 3 DA E 30 0.06 SIDE CHAIN REMARK 500 3 DA E 33 0.06 SIDE CHAIN REMARK 500 3 DA E 34 0.05 SIDE CHAIN REMARK 500 4 TYR A 484 0.07 SIDE CHAIN REMARK 500 4 ARG A 511 0.08 SIDE CHAIN REMARK 500 4 ARG A 595 0.12 SIDE CHAIN REMARK 500 4 DC D 11 0.07 SIDE CHAIN REMARK 500 4 DT E 23 0.06 SIDE CHAIN REMARK 500 4 DG E 27 0.09 SIDE CHAIN REMARK 500 4 DA E 33 0.06 SIDE CHAIN REMARK 500 5 TYR A 484 0.07 SIDE CHAIN REMARK 500 5 ARG A 501 0.08 SIDE CHAIN REMARK 500 5 TYR A 503 0.07 SIDE CHAIN REMARK 500 5 HIS A 544 0.09 SIDE CHAIN REMARK 500 5 ARG A 595 0.10 SIDE CHAIN REMARK 500 5 TYR A 597 0.12 SIDE CHAIN REMARK 500 5 DA D 17 0.05 SIDE CHAIN REMARK 500 5 DT E 26 0.08 SIDE CHAIN REMARK 500 5 DG E 27 0.06 SIDE CHAIN REMARK 500 5 DC E 29 0.07 SIDE CHAIN REMARK 500 5 DA E 30 0.06 SIDE CHAIN REMARK 500 5 DG E 32 0.07 SIDE CHAIN REMARK 500 6 TYR A 484 0.09 SIDE CHAIN REMARK 500 6 TYR A 597 0.10 SIDE CHAIN REMARK 500 REMARK 500 THIS ENTRY HAS 175 PLANE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 701 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 496 SG REMARK 620 2 CYS A 499 SG 115.6 REMARK 620 3 HIS A 512 NE2 107.0 112.6 REMARK 620 4 HIS A 516 NE2 110.6 104.4 106.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 702 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 524 SG REMARK 620 2 CYS A 527 SG 110.3 REMARK 620 3 HIS A 540 NE2 113.3 113.7 REMARK 620 4 HIS A 544 NE2 110.5 107.8 100.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 703 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 552 SG REMARK 620 2 CYS A 555 SG 111.8 REMARK 620 3 HIS A 568 NE2 109.4 109.4 REMARK 620 4 HIS A 573 NE2 109.6 107.8 108.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 703 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18462 RELATED DB: BMRB DBREF 2LT7 A 472 604 UNP Q86T24 KAISO_HUMAN 472 604 DBREF 2LT7 D 1 19 PDB 2LT7 2LT7 1 19 DBREF 2LT7 E 20 38 PDB 2LT7 2LT7 20 38 SEQRES 1 A 133 ALA ASN LYS ARG MET LYS VAL LYS HIS ASP ASP HIS TYR SEQRES 2 A 133 GLU LEU ILE VAL ASP GLY ARG VAL TYR TYR ILE CYS ILE SEQRES 3 A 133 VAL CYS LYS ARG SER TYR VAL CYS LEU THR SER LEU ARG SEQRES 4 A 133 ARG HIS PHE ASN ILE HIS SER TRP GLU LYS LYS TYR PRO SEQRES 5 A 133 CYS ARG TYR CYS GLU LYS VAL PHE PRO LEU ALA GLU TYR SEQRES 6 A 133 ARG THR LYS HIS GLU ILE HIS HIS THR GLY GLU ARG ARG SEQRES 7 A 133 TYR GLN CYS LEU ALA CYS GLY LYS SER PHE ILE ASN TYR SEQRES 8 A 133 GLN PHE MET SER SER HIS ILE LYS SER VAL HIS SER GLN SEQRES 9 A 133 ASP PRO SER GLY ASP SER LYS LEU TYR ARG LEU HIS PRO SEQRES 10 A 133 CYS ARG SER LEU GLN ILE ARG GLN TYR ALA TYR LEU SER SEQRES 11 A 133 ASP ARG SER SEQRES 1 D 19 DG DT DG DC DT DT DC DC DT DG DC DC DA SEQRES 2 D 19 DA DT DA DA DC DG SEQRES 1 E 19 DC DG DT DT DA DT DT DG DG DC DA DG DG SEQRES 2 E 19 DA DA DG DC DA DC HET ZN A 701 1 HET ZN A 702 1 HET ZN A 703 1 HETNAM ZN ZINC ION FORMUL 4 ZN 3(ZN 2+) HELIX 1 1 CYS A 505 TRP A 518 1 14 HELIX 2 2 LEU A 533 GLY A 546 1 14 HELIX 3 3 ASN A 561 HIS A 573 1 13 HELIX 4 4 TYR A 597 ASP A 602 1 6 SHEET 1 A 3 HIS A 483 VAL A 488 0 SHEET 2 A 3 ARG A 491 CYS A 496 -1 O ILE A 495 N TYR A 484 SHEET 3 A 3 SER A 502 TYR A 503 -1 O TYR A 503 N TYR A 494 SHEET 1 B 2 TYR A 522 PRO A 523 0 SHEET 2 B 2 VAL A 530 PHE A 531 -1 O PHE A 531 N TYR A 522 SHEET 1 C 3 SER A 558 PHE A 559 0 SHEET 2 C 3 TYR A 550 CYS A 552 -1 N TYR A 550 O PHE A 559 SHEET 3 C 3 TYR A 584 LEU A 586 -1 O ARG A 585 N GLN A 551 LINK SG CYS A 496 ZN ZN A 701 1555 1555 2.29 LINK SG CYS A 499 ZN ZN A 701 1555 1555 2.29 LINK NE2 HIS A 512 ZN ZN A 701 1555 1555 2.07 LINK NE2 HIS A 516 ZN ZN A 701 1555 1555 2.07 LINK SG CYS A 524 ZN ZN A 702 1555 1555 2.30 LINK SG CYS A 527 ZN ZN A 702 1555 1555 2.29 LINK NE2 HIS A 540 ZN ZN A 702 1555 1555 2.09 LINK NE2 HIS A 544 ZN ZN A 702 1555 1555 2.08 LINK SG CYS A 552 ZN ZN A 703 1555 1555 2.29 LINK SG CYS A 555 ZN ZN A 703 1555 1555 2.29 LINK NE2 HIS A 568 ZN ZN A 703 1555 1555 2.08 LINK NE2 HIS A 573 ZN ZN A 703 1555 1555 2.09 SITE 1 AC1 4 CYS A 496 CYS A 499 HIS A 512 HIS A 516 SITE 1 AC2 4 CYS A 524 CYS A 527 HIS A 540 HIS A 544 SITE 1 AC3 4 CYS A 552 CYS A 555 HIS A 568 HIS A 573 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1