HEADER MEMBRANE PROTEIN 19-JUL-12 2LW3 TITLE SOLUTION STRUCTURE OF THE SOLUBLE DOMAIN OF MMPS4 FROM MYCOBACTERIUM TITLE 2 TUBERCULOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE MEMBRANE PROTEIN MMPS4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: THE SOLUBLE DOMAIN, UNP RESIDUES 52-140; COMPND 5 SYNONYM: PGB14T-X; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: MMPS4; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET-21B KEYWDS MMPS4, SOLUBLE DOMAIN, MYCOBACTERIUM TUBERCULOSIS, MEMBRANE PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR Z.XI,P.SUN,W.WANG,C.LAI,F.WU,C.TIAN REVDAT 2 01-MAY-24 2LW3 1 REMARK SEQADV REVDAT 1 13-MAR-13 2LW3 0 JRNL AUTH R.M.WELLS,C.M.JONES,Z.XI,A.SPEER,O.DANILCHANKA,K.S.DOORNBOS, JRNL AUTH 2 P.SUN,F.WU,C.TIAN,M.NIEDERWEIS JRNL TITL DISCOVERY OF A SIDEROPHORE EXPORT SYSTEM ESSENTIAL FOR JRNL TITL 2 VIRULENCE OF MYCOBACTERIUM TUBERCULOSIS JRNL REF PLOS PATHOG. V. 9 03120 2013 JRNL REFN ISSN 1553-7366 JRNL PMID 23431276 JRNL DOI 10.1371/JOURNAL.PPAT.1003120 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRDRAW, X-PLOR NIH REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRDRAW), SCHWIETERS, KUSZEWSKI, TJANDRA AND REMARK 3 CLORE (X-PLOR NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LW3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-AUG-12. REMARK 100 THE DEPOSITION ID IS D_1000102904. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.5 REMARK 210 IONIC STRENGTH : 0.108 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.2-0.5MM [U-100% 13C; U-100% REMARK 210 15N] MMPS4-1, 2MM DTT-2, 50MM REMARK 210 SODIUM PHOSPHATE-3, 90% H2O/10% REMARK 210 D2O; 0.2-0.5MM [U-100% 15N] REMARK 210 MMPS4-4, 2MM DTT-5, 50MM SODIUM REMARK 210 PHOSPHATE-6, 90% H2O/10% D2O; REMARK 210 0.2-0.5MM [U-100% 13C; U-100% REMARK 210 15N] MMPS4-7, 2MM DTT-8, 50MM REMARK 210 SODIUM PHOSPHATE-9, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D CBCA(CO)NH; 3D HNCO; 3D HNCA; REMARK 210 3D HNCACB; 3D HBHA(CO)NH; 3D REMARK 210 H(CCO)NH; 3D HCCH-TOCSY; 3D 1H- REMARK 210 15N NOESY; 3D 1H-13C NOESY; 3D REMARK 210 HCCH-COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 700 MHZ; 850 MHZ REMARK 210 SPECTROMETER MODEL : INOVA; AVANCE REMARK 210 SPECTROMETER MANUFACTURER : VARIAN; BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRVIEW, SPARKY, X-PLOR NIH REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 300 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG SER A 107 H SER A 109 1.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 74 79.56 70.52 REMARK 500 1 GLU A 75 85.17 -170.77 REMARK 500 1 TRP A 86 -156.49 -132.86 REMARK 500 1 ASN A 93 -100.35 -34.76 REMARK 500 1 ASP A 94 72.59 -162.80 REMARK 500 1 ASN A 106 48.86 -78.02 REMARK 500 1 ASP A 117 20.35 39.22 REMARK 500 1 ASN A 130 72.03 -164.38 REMARK 500 1 ALA A 131 71.66 -66.49 REMARK 500 1 TYR A 132 6.18 -157.99 REMARK 500 1 TYR A 134 -33.79 67.80 REMARK 500 1 CYS A 135 98.24 178.23 REMARK 500 1 LYS A 138 128.29 -27.32 REMARK 500 1 SER A 139 -16.54 -164.84 REMARK 500 2 SER A 74 -71.65 82.15 REMARK 500 2 GLU A 75 88.75 -26.12 REMARK 500 2 VAL A 83 -76.01 -62.08 REMARK 500 2 ASN A 93 120.13 -30.78 REMARK 500 2 ASP A 94 92.07 -42.51 REMARK 500 2 ALA A 95 -171.92 -175.03 REMARK 500 2 SER A 109 93.52 44.02 REMARK 500 2 ARG A 121 24.18 -168.14 REMARK 500 2 VAL A 129 1.10 -55.35 REMARK 500 2 THR A 133 97.72 -59.14 REMARK 500 2 TYR A 134 102.88 -174.41 REMARK 500 2 LEU A 136 -91.14 -80.05 REMARK 500 2 VAL A 137 95.73 -33.42 REMARK 500 3 PRO A 60 152.87 -47.56 REMARK 500 3 SER A 74 34.21 78.55 REMARK 500 3 ASN A 93 91.12 -25.54 REMARK 500 3 ASP A 94 124.98 -31.47 REMARK 500 3 ALA A 95 -71.78 163.75 REMARK 500 3 ASN A 106 28.44 -79.28 REMARK 500 3 ASP A 117 15.21 48.89 REMARK 500 3 ASN A 130 73.70 177.20 REMARK 500 3 THR A 133 174.43 -58.22 REMARK 500 3 CYS A 135 101.05 34.34 REMARK 500 3 VAL A 137 -26.47 -177.21 REMARK 500 4 SER A 74 -127.68 -176.72 REMARK 500 4 ASN A 93 -134.64 28.77 REMARK 500 4 ALA A 95 -171.91 168.35 REMARK 500 4 ASN A 130 62.50 83.30 REMARK 500 4 ALA A 131 71.05 -60.30 REMARK 500 4 THR A 133 171.15 -39.58 REMARK 500 4 TYR A 134 146.24 62.08 REMARK 500 4 VAL A 137 -0.22 -147.14 REMARK 500 4 LYS A 138 106.90 46.97 REMARK 500 5 SER A 74 62.03 69.60 REMARK 500 5 GLU A 75 92.26 -170.43 REMARK 500 5 VAL A 83 -96.75 -61.35 REMARK 500 REMARK 500 THIS ENTRY HAS 272 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18602 RELATED DB: BMRB DBREF 2LW3 A 52 140 UNP P0A5K2 MMPS4_MYCTU 52 140 SEQADV 2LW3 MET A 51 UNP P0A5K2 EXPRESSION TAG SEQRES 1 A 90 MET HIS LEU THR TYR GLU ILE PHE GLY PRO PRO GLY THR SEQRES 2 A 90 VAL ALA ASP ILE SER TYR PHE ASP VAL ASN SER GLU PRO SEQRES 3 A 90 GLN ARG VAL ASP GLY ALA VAL LEU PRO TRP SER LEU HIS SEQRES 4 A 90 ILE THR THR ASN ASP ALA ALA VAL MET GLY ASN ILE VAL SEQRES 5 A 90 ALA GLN GLY ASN SER ASP SER ILE GLY CYS ARG ILE THR SEQRES 6 A 90 VAL ASP GLY LYS VAL ARG ALA GLU ARG VAL SER ASN GLU SEQRES 7 A 90 VAL ASN ALA TYR THR TYR CYS LEU VAL LYS SER ALA SHEET 1 A 2 HIS A 52 LEU A 53 0 SHEET 2 A 2 ILE A 90 THR A 91 -1 O ILE A 90 N LEU A 53 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1