HEADER APOPTOSIS 05-AUG-12 2LWP TITLE THE NMR SOLUTION STRUCTURE OF THE THE UBIQUITIN HOMOLOGY DOMAIN OF TITLE 2 MOUSE BAG-1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BAG FAMILY MOLECULAR CHAPERONE REGULATOR 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BAG-1, BCL-2-ASSOCIATED ATHANOGENE 1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: BAG1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX-4T1 KEYWDS PROTEASOMAL DEGRADATION, APOPTOSIS EXPDTA SOLUTION NMR NUMMDL 18 MDLTYP MINIMIZED AVERAGE AUTHOR H.HUANG,C.YU REVDAT 2 14-JUN-23 2LWP 1 REMARK REVDAT 1 19-JUN-13 2LWP 0 JRNL AUTH H.W.HUANG,C.YU JRNL TITL THE NMR SOLUTION STRUCTURE OF THE UBIQUITIN HOMOLOGY DOMAIN JRNL TITL 2 OF BCL-2-ASSOCIATED ATHANOGENE 1 (BAG-1-UBH) FROM MUS JRNL TITL 3 MUSCULUS. JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 431 86 2013 JRNL REFN ISSN 0006-291X JRNL PMID 23277101 JRNL DOI 10.1016/J.BBRC.2012.12.082 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH H.HUANG,C.YU REMARK 1 TITL 1H, 15N AND 13 C RESONANCE ASSIGNMENTS OF UBIQUITIN HOMOLOGY REMARK 1 TITL 2 OF MOUSE BAG-1 REMARK 1 REF TO BE PUBLISHED REMARK 1 REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER A. T. ET.AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LWP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-AUG-12. REMARK 100 THE DEPOSITION ID IS D_1000102926. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 0.1 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.0 MM [U-100% 13C; U-100% 15N] REMARK 210 UBIQUITIN HOMOLOGY DOMAIN OF REMARK 210 MOUSE BAG, 20 MM SODIUM REMARK 210 PHOSPHATE, 100 MM SODIUM REMARK 210 CHLORIDE, 5 MM DTT, 90% H2O/10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D C(CO)NH; 3D REMARK 210 HNCO; 3D HNCA; 3D HNCACB; 3D REMARK 210 HBHA(CO)NH; 3D HN(CO)CA; 3D REMARK 210 H(CCO)NH; 3D HCCH-TOCSY; 3D HCCH- REMARK 210 COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : VNMR REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 18 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG LEU A 18 HA ASN A 85 1.06 REMARK 500 HB3 LEU A 64 HB3 LEU A 71 1.11 REMARK 500 HD2 TYR A 29 HZ3 LYS A 95 1.27 REMARK 500 O ASN A 85 H CYS A 87 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 4 -66.59 -163.91 REMARK 500 1 GLU A 6 -85.90 -138.15 REMARK 500 1 VAL A 8 65.91 -179.60 REMARK 500 1 PRO A 16 37.93 -86.97 REMARK 500 1 ARG A 17 61.56 61.25 REMARK 500 1 SER A 25 -49.66 70.85 REMARK 500 1 ASN A 26 -30.98 179.84 REMARK 500 1 GLU A 27 104.52 -44.78 REMARK 500 1 GLN A 36 22.69 88.35 REMARK 500 1 GLN A 37 -85.30 -102.21 REMARK 500 1 ASN A 39 -39.97 55.75 REMARK 500 1 GLU A 75 -102.30 -95.59 REMARK 500 1 PRO A 77 131.18 -25.86 REMARK 500 1 LEU A 81 20.35 -73.16 REMARK 500 1 MET A 83 84.02 -67.91 REMARK 500 1 ASN A 85 107.92 -57.40 REMARK 500 1 CYS A 87 -147.54 69.20 REMARK 500 2 THR A 4 -68.02 -169.04 REMARK 500 2 GLU A 6 -93.34 -146.19 REMARK 500 2 VAL A 8 69.83 -178.17 REMARK 500 2 GLN A 9 -69.13 -122.01 REMARK 500 2 GLU A 12 -153.81 -121.87 REMARK 500 2 PRO A 16 41.95 -88.39 REMARK 500 2 SER A 25 -41.05 67.30 REMARK 500 2 ASN A 26 -34.75 179.23 REMARK 500 2 GLN A 36 45.79 81.08 REMARK 500 2 GLN A 37 -89.42 -130.23 REMARK 500 2 ASN A 39 -44.93 57.78 REMARK 500 2 MET A 74 71.75 -152.18 REMARK 500 2 GLU A 75 -102.45 -92.31 REMARK 500 2 PRO A 77 131.31 -24.77 REMARK 500 2 MET A 83 84.18 -66.76 REMARK 500 2 ASN A 85 106.37 -57.53 REMARK 500 2 CYS A 87 -146.97 69.80 REMARK 500 3 THR A 4 -61.33 -165.85 REMARK 500 3 GLU A 5 33.50 -88.96 REMARK 500 3 GLU A 6 -85.30 -97.24 REMARK 500 3 VAL A 8 70.77 -176.91 REMARK 500 3 GLN A 9 -60.50 -125.37 REMARK 500 3 PRO A 16 38.77 -87.62 REMARK 500 3 SER A 25 -48.61 63.83 REMARK 500 3 ASN A 26 -34.65 -165.85 REMARK 500 3 GLU A 27 107.02 -53.57 REMARK 500 3 GLN A 36 18.37 87.32 REMARK 500 3 GLN A 37 -92.92 -98.42 REMARK 500 3 ASN A 39 -42.22 55.28 REMARK 500 3 GLU A 75 -113.46 -89.27 REMARK 500 3 PRO A 77 128.90 -20.19 REMARK 500 3 LEU A 81 20.01 -72.33 REMARK 500 3 MET A 83 82.91 -67.28 REMARK 500 REMARK 500 THIS ENTRY HAS 308 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18416 RELATED DB: BMRB DBREF 2LWP A 1 97 UNP Q60739 BAG1_MOUSE 137 233 SEQRES 1 A 97 MET ALA LYS THR GLU GLU MET VAL GLN THR GLU GLU MET SEQRES 2 A 97 GLU THR PRO ARG LEU SER VAL ILE VAL THR HIS SER ASN SEQRES 3 A 97 GLU ARG TYR ASP LEU LEU VAL THR PRO GLN GLN GLY ASN SEQRES 4 A 97 SER GLU PRO VAL VAL GLN ASP LEU ALA GLN LEU VAL GLU SEQRES 5 A 97 GLU ALA THR GLY VAL PRO LEU PRO PHE GLN LYS LEU ILE SEQRES 6 A 97 PHE LYS GLY LYS SER LEU LYS GLU MET GLU THR PRO LEU SEQRES 7 A 97 SER ALA LEU GLY MET GLN ASN GLY CYS ARG VAL MET LEU SEQRES 8 A 97 ILE GLY GLU LYS SER ASN HELIX 1 1 VAL A 43 GLY A 56 1 14 HELIX 2 2 PRO A 58 GLN A 62 5 5 SHEET 1 A 5 GLU A 27 LEU A 32 0 SHEET 2 A 5 SER A 19 HIS A 24 -1 N VAL A 20 O LEU A 31 SHEET 3 A 5 ARG A 88 LEU A 91 1 O VAL A 89 N ILE A 21 SHEET 4 A 5 LEU A 64 PHE A 66 -1 N ILE A 65 O MET A 90 SHEET 5 A 5 LYS A 69 SER A 70 -1 O LYS A 69 N PHE A 66 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1