HEADER CHAPERONE 08-AUG-12 2LWX TITLE SOLUTION STRUCTURE OF THE C-TERMINAL PDR1-ACTIVATING DOMAIN OF THE J- TITLE 2 PROTEIN ZUO1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZUOTIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C-TERMINAL PDR1 ACTIVATING DOMAIN; COMPND 5 SYNONYM: DNAJ-RELATED PROTEIN ZUO1, J PROTEIN ZUO1, HEAT SHOCK COMPND 6 PROTEIN 40 HOMOLOG ZUO1, RIBOSOME-ASSOCIATED COMPLEX SUBUNIT ZUO1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 STRAIN: ATCC 204508 / S288C; SOURCE 6 GENE: YGR285C, ZUO1; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21[PREP4]; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PQE30 KEYWDS J-PROTEIN, MOLECULAR CHAPERONE, PLEIOTROPIC DRUG RESISTANCE, KEYWDS 2 CHAPERONE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR B.F.VOLKMAN,J.K.DUCETT,F.C.PETERSON,E.A.CRAIG REVDAT 5 15-MAY-24 2LWX 1 REMARK REVDAT 4 14-JUN-23 2LWX 1 REMARK SEQADV REVDAT 3 16-JAN-13 2LWX 1 JRNL REVDAT 2 17-OCT-12 2LWX 1 JRNL REVDAT 1 03-OCT-12 2LWX 0 JRNL AUTH J.K.DUCETT,F.C.PETERSON,L.A.HOOVER,A.J.PRUNUSKE,B.F.VOLKMAN, JRNL AUTH 2 E.A.CRAIG JRNL TITL UNFOLDING OF THE C-TERMINAL DOMAIN OF THE J-PROTEIN ZUO1 JRNL TITL 2 RELEASES AUTOINHIBITION AND ACTIVATES PDR1-DEPENDENT JRNL TITL 3 TRANSCRIPTION. JRNL REF J.MOL.BIOL. V. 425 19 2013 JRNL REFN ISSN 0022-2836 JRNL PMID 23036859 JRNL DOI 10.1016/J.JMB.2012.09.020 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XPLOR-NIH 2.9.3, CYANA 2.1 REMARK 3 AUTHORS : SCHWIETERS,C.D.,KUSZEWSKI,J.J.,TJ (XPLOR-NIH), REMARK 3 GUNTERT, MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: AUTOMATED METHODS WERE USED FOR REMARK 3 BACKBONE CHEMICAL SHIFT ASSIGNMENT AND ITERATIVE NOE REFINEMENT. REMARK 3 FINAL STRUCTURES WERE OBTAINED BY MOLECULAR DYNAMICS IN EXPLICIT REMARK 3 SOLVENT. STRUCTURES ARE BASED ON A TOTAL OF 1471 NOE CONSTRAINTS REMARK 3 (418 INTRA, 272 SEQUENTIAL, 463 MEDIUM, AND 318 LONG RANGE) AND REMARK 3 148 PHI AND PSI DIHEDRAL ANGLE CONSTRAINTS. REMARK 4 REMARK 4 2LWX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-AUG-12. REMARK 100 THE DEPOSITION ID IS D_1000102934. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 283 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 70 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.2 MM [U-100% 13C; U-100% 15N] REMARK 210 ZUOTIN, 20 MM POTASSIUM REMARK 210 PHOSPHATE, 50 MM SODIUM CHLORIDE, REMARK 210 1 MM DTT, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C- REMARK 210 SEPARATED_NOESY; 3D_13C- REMARK 210 SEPARATED_NOESY (AROMATIC) REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE II REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN 2.1, NMRPIPE 2007, XEASY REMARK 210 1.3, GARANT 2.1, CYANA 2.1 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET A 326 REMARK 465 ARG A 327 REMARK 465 GLY A 328 REMARK 465 SER A 329 REMARK 465 HIS A 330 REMARK 465 HIS A 331 REMARK 465 HIS A 332 REMARK 465 HIS A 333 REMARK 465 HIS A 334 REMARK 465 HIS A 335 REMARK 465 HIS A 336 REMARK 465 HIS A 337 REMARK 465 GLY A 338 REMARK 465 SER A 339 REMARK 465 GLU A 340 REMARK 465 ASN A 341 REMARK 465 LEU A 342 REMARK 465 TYR A 343 REMARK 465 PHE A 344 REMARK 465 GLN A 345 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 366 155.43 76.26 REMARK 500 2 SER A 347 96.64 -161.74 REMARK 500 2 ASP A 366 158.08 78.90 REMARK 500 3 ASP A 366 164.80 76.22 REMARK 500 3 ASN A 403 84.67 -154.98 REMARK 500 3 SER A 430 -58.53 64.67 REMARK 500 4 ASP A 366 168.28 73.49 REMARK 500 4 LEU A 429 -79.21 -111.59 REMARK 500 4 SER A 430 -45.87 72.35 REMARK 500 5 SER A 347 48.88 -83.88 REMARK 500 5 ASP A 366 159.88 76.32 REMARK 500 6 ASP A 366 164.34 72.86 REMARK 500 6 LEU A 429 -80.03 -123.46 REMARK 500 6 SER A 430 -42.17 72.48 REMARK 500 7 ASP A 366 161.94 75.46 REMARK 500 7 ASP A 370 45.85 -109.59 REMARK 500 8 ASP A 366 160.39 76.34 REMARK 500 9 ASP A 366 165.95 76.71 REMARK 500 10 ASP A 366 160.96 77.60 REMARK 500 10 ASN A 403 104.07 -166.99 REMARK 500 11 ASP A 366 157.62 75.39 REMARK 500 11 ASN A 403 88.68 -155.92 REMARK 500 12 ASP A 366 160.70 74.58 REMARK 500 13 ASP A 366 161.48 76.43 REMARK 500 13 SER A 430 -57.85 68.90 REMARK 500 14 ASP A 366 163.73 76.10 REMARK 500 14 LEU A 429 32.01 -140.22 REMARK 500 15 ASP A 366 152.45 75.58 REMARK 500 16 ASP A 366 160.04 79.75 REMARK 500 17 ASP A 366 161.39 74.94 REMARK 500 18 SER A 347 -69.85 -155.12 REMARK 500 18 ASP A 366 159.06 75.00 REMARK 500 18 ASP A 370 40.30 -103.94 REMARK 500 19 ASP A 366 157.69 77.62 REMARK 500 19 LEU A 429 -82.06 -124.50 REMARK 500 19 SER A 430 -50.40 74.84 REMARK 500 20 ASP A 366 158.31 77.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17685 RELATED DB: BMRB DBREF 2LWX A 348 433 UNP P32527 ZUO1_YEAST 348 433 SEQADV 2LWX MET A 326 UNP P32527 EXPRESSION TAG SEQADV 2LWX ARG A 327 UNP P32527 EXPRESSION TAG SEQADV 2LWX GLY A 328 UNP P32527 EXPRESSION TAG SEQADV 2LWX SER A 329 UNP P32527 EXPRESSION TAG SEQADV 2LWX HIS A 330 UNP P32527 EXPRESSION TAG SEQADV 2LWX HIS A 331 UNP P32527 EXPRESSION TAG SEQADV 2LWX HIS A 332 UNP P32527 EXPRESSION TAG SEQADV 2LWX HIS A 333 UNP P32527 EXPRESSION TAG SEQADV 2LWX HIS A 334 UNP P32527 EXPRESSION TAG SEQADV 2LWX HIS A 335 UNP P32527 EXPRESSION TAG SEQADV 2LWX HIS A 336 UNP P32527 EXPRESSION TAG SEQADV 2LWX HIS A 337 UNP P32527 EXPRESSION TAG SEQADV 2LWX GLY A 338 UNP P32527 EXPRESSION TAG SEQADV 2LWX SER A 339 UNP P32527 EXPRESSION TAG SEQADV 2LWX GLU A 340 UNP P32527 EXPRESSION TAG SEQADV 2LWX ASN A 341 UNP P32527 EXPRESSION TAG SEQADV 2LWX LEU A 342 UNP P32527 EXPRESSION TAG SEQADV 2LWX TYR A 343 UNP P32527 EXPRESSION TAG SEQADV 2LWX PHE A 344 UNP P32527 EXPRESSION TAG SEQADV 2LWX GLN A 345 UNP P32527 EXPRESSION TAG SEQADV 2LWX GLY A 346 UNP P32527 EXPRESSION TAG SEQADV 2LWX SER A 347 UNP P32527 EXPRESSION TAG SEQRES 1 A 108 MET ARG GLY SER HIS HIS HIS HIS HIS HIS HIS HIS GLY SEQRES 2 A 108 SER GLU ASN LEU TYR PHE GLN GLY SER LYS ALA ALA LYS SEQRES 3 A 108 LYS LYS ASN LYS ARG ALA ILE ARG ASN SER ALA LYS GLU SEQRES 4 A 108 ALA ASP TYR PHE GLY ASP ALA ASP LYS ALA THR THR ILE SEQRES 5 A 108 ASP GLU GLN VAL GLY LEU ILE VAL ASP SER LEU ASN ASP SEQRES 6 A 108 GLU GLU LEU VAL SER THR ALA ASP LYS ILE LYS ALA ASN SEQRES 7 A 108 ALA ALA GLY ALA LYS GLU VAL LEU LYS GLU SER ALA LYS SEQRES 8 A 108 THR ILE VAL ASP SER GLY LYS LEU PRO SER SER LEU LEU SEQRES 9 A 108 SER TYR PHE VAL HELIX 1 1 SER A 347 ALA A 365 1 19 HELIX 2 2 ASP A 370 ASP A 372 5 3 HELIX 3 3 LYS A 373 LEU A 388 1 16 HELIX 4 4 ASN A 389 ASN A 403 1 15 HELIX 5 5 ALA A 404 GLY A 406 5 3 HELIX 6 6 ALA A 407 SER A 421 1 15 HELIX 7 7 PRO A 425 SER A 430 5 6 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1