HEADER TRANSCRIPTION 22-SEP-12 2LZ1 TITLE SOLUTION NMR STRUCTURE OF THE DNA-BINDING DOMAIN OF HUMAN NF-E2- TITLE 2 RELATED FACTOR 2, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) TITLE 3 TARGET HR3520O COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEAR FACTOR ERYTHROID 2-RELATED FACTOR 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: DNA-BINDING DOMAIN RESIDUES 445-523; COMPND 5 SYNONYM: NF-E2-RELATED FACTOR 2, NFE2-RELATED FACTOR 2, HEBP1, COMPND 6 NUCLEAR FACTOR, ERYTHROID DERIVED 2, LIKE 2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NFE2L2, NRF2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PMGK; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET15_NESG KEYWDS STRUCTURAL GENOMICS, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG), KEYWDS 2 PSI-BIOLOGY, PROTEIN STRUCTURE INITIATIVE, TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.ELETSKY,S.V.S.R.K.PULAVARTI,D.LEE,E.KOHAN,H.JANJUA,R.XIAO, AUTHOR 2 T.B.ACTON,J.K.EVERETT,G.T.MONTELIONE,T.SZYPERSKI,NORTHEAST AUTHOR 3 STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 2 14-JUN-23 2LZ1 1 REMARK SEQADV REVDAT 1 28-NOV-12 2LZ1 0 JRNL AUTH A.ELETSKY,S.V.S.R.K.PULAVARTI,D.LEE,E.KOHAN,H.JANJUA,R.XIAO, JRNL AUTH 2 T.B.ACTON,J.K.EVERETT,G.T.MONTELIONE,T.SZYPERSKI JRNL TITL SOLUTION NMR STRUCTURE OF THE DNA-BINDING DOMAIN OF HUMAN JRNL TITL 2 NF-E2-RELATED FACTOR 2, NORTHEAST STRUCTURAL GENOMICS JRNL TITL 3 CONSORTIUM (NESG) TARGET HR3520O JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.2, CYANA 3.0, AS-DP 1.0 REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 (CNS), GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 HUANG, TEJERO, POWERS AND MONTELIONE (AS-DP) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: STRUCTURE DETERMINATION WAS PERFORMED REMARK 3 BY RUNNING CYANA AND ASDP IN PARALLEL USING NOE-BASED REMARK 3 CONSTRAINTS AND PHI AND PSI DIHEDRAL ANGLE CONSTRAINTS FROM REMARK 3 TALOS+. CONSENSUS PEAK ASSIGNMENTS WERE SELECTED AND USED IN REMARK 3 ITERATIVE REFINEMENT WITH CYANA. THE 20 CONFORMERS OUT OF 100 REMARK 3 WITH THE LOWEST TARGET FUNCTION WERE FURTHER REFINED BY REMARK 3 SIMULATED ANNEALING IN EXPLICIT WATER BATH USING THE PROGRAM CNS REMARK 3 WITH PARAM19 FORCE FIELD REMARK 4 REMARK 4 2LZ1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-SEP-12. REMARK 100 THE DEPOSITION ID IS D_1000103005. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-100% 13C; U-100% 15N] REMARK 210 HR3520O, 50 UM DSS, 0.02 % REMARK 210 SODIUM AZIDE, 50 MM ARGININE, 10 REMARK 210 MM DTT, 50 MM AMMONIUM ACETATE, REMARK 210 90% H2O/10% D2O; 0.5 MM [5% 13C; REMARK 210 U-100% 15N] HR3520O, 50 UM DSS, REMARK 210 0.02 % SODIUM AZIDE, 50 MM REMARK 210 ARGININE, 10 MM DTT, 50 MM REMARK 210 AMMONIUM ACETATE, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 3D HNCO; 3D CBCA(CO) REMARK 210 NH; 3D HNCACB; 2D 1H-13C HSQC REMARK 210 AROMATIC; 3D SIMUTANEOUS 13C- REMARK 210 AROMATIC,13C-ALIPHATIC,15N REMARK 210 EDITED 1H-1H NOESY; 3D HBHA(CO) REMARK 210 NH; 3D HN(CA)CO; 3D (H)CCH-TOCSY REMARK 210 ALIPHATIC; 3D (H)CCH-COSY REMARK 210 ALIPHATIC; 2D 1H-13C HSQC METHYL; REMARK 210 1D 15N T1; 1D 15N T2 REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 750 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CNS 1.2, CYANA 3.0, AUTOASSIGN REMARK 210 2.3.0, VNMRJ 2.2D, CARA 1.8.4, REMARK 210 TALOS+, PSVS 1.4 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 HIS A 5 102.10 -163.95 REMARK 500 1 LYS A 75 75.01 -101.35 REMARK 500 1 VAL A 76 54.30 -93.46 REMARK 500 1 ASN A 80 104.25 -58.65 REMARK 500 1 LYS A 83 172.42 61.22 REMARK 500 2 HIS A 3 166.64 66.32 REMARK 500 2 HIS A 4 -65.52 -135.16 REMARK 500 2 HIS A 7 2.45 -159.37 REMARK 500 2 HIS A 8 98.16 -65.40 REMARK 500 2 MET A 11 71.03 -168.27 REMARK 500 2 HIS A 13 58.00 -153.39 REMARK 500 2 ARG A 16 73.39 59.42 REMARK 500 2 GLU A 18 87.65 62.25 REMARK 500 2 ALA A 19 12.08 -149.73 REMARK 500 2 ARG A 84 -35.41 -143.56 REMARK 500 2 LYS A 85 129.00 74.55 REMARK 500 2 ASN A 88 108.69 -58.37 REMARK 500 2 ILE A 89 -56.30 74.93 REMARK 500 3 HIS A 6 -69.02 -151.90 REMARK 500 3 HIS A 7 -82.92 57.41 REMARK 500 3 LYS A 12 81.21 -155.37 REMARK 500 3 SER A 14 75.70 52.73 REMARK 500 3 HIS A 20 75.62 59.30 REMARK 500 3 LYS A 73 -81.95 -137.63 REMARK 500 3 ASN A 74 133.18 -175.81 REMARK 500 3 ARG A 84 86.54 -69.61 REMARK 500 3 LYS A 85 -11.68 -141.67 REMARK 500 4 SER A 9 67.47 -168.29 REMARK 500 4 HIS A 20 90.97 -67.95 REMARK 500 4 ASN A 74 -75.97 61.55 REMARK 500 4 LYS A 75 83.30 -66.35 REMARK 500 4 ALA A 77 149.97 70.37 REMARK 500 4 ALA A 78 -174.91 60.16 REMARK 500 4 LYS A 85 91.42 -69.85 REMARK 500 5 HIS A 6 98.42 -52.98 REMARK 500 5 HIS A 13 128.43 -172.42 REMARK 500 5 ALA A 77 82.38 -69.92 REMARK 500 5 ARG A 84 97.84 -64.69 REMARK 500 5 ASN A 88 -37.50 74.55 REMARK 500 6 SER A 9 -76.58 -113.76 REMARK 500 6 HIS A 10 53.65 -96.47 REMARK 500 6 GLU A 18 -72.71 71.99 REMARK 500 6 ALA A 19 90.80 -53.03 REMARK 500 6 LYS A 73 -60.57 70.17 REMARK 500 6 ALA A 77 166.74 66.45 REMARK 500 6 CYS A 81 -98.69 -133.43 REMARK 500 6 GLU A 87 -53.36 -166.85 REMARK 500 7 HIS A 7 149.61 -175.19 REMARK 500 7 HIS A 10 -20.59 -169.52 REMARK 500 7 MET A 11 38.22 -81.28 REMARK 500 REMARK 500 THIS ENTRY HAS 145 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NESG-HR3520O RELATED DB: TARGETDB REMARK 900 RELATED ID: 18735 RELATED DB: BMRB DBREF 2LZ1 A 12 90 UNP Q16236 NF2L2_HUMAN 445 523 SEQADV 2LZ1 MET A 1 UNP Q16236 EXPRESSION TAG SEQADV 2LZ1 GLY A 2 UNP Q16236 EXPRESSION TAG SEQADV 2LZ1 HIS A 3 UNP Q16236 EXPRESSION TAG SEQADV 2LZ1 HIS A 4 UNP Q16236 EXPRESSION TAG SEQADV 2LZ1 HIS A 5 UNP Q16236 EXPRESSION TAG SEQADV 2LZ1 HIS A 6 UNP Q16236 EXPRESSION TAG SEQADV 2LZ1 HIS A 7 UNP Q16236 EXPRESSION TAG SEQADV 2LZ1 HIS A 8 UNP Q16236 EXPRESSION TAG SEQADV 2LZ1 SER A 9 UNP Q16236 EXPRESSION TAG SEQADV 2LZ1 HIS A 10 UNP Q16236 EXPRESSION TAG SEQADV 2LZ1 MET A 11 UNP Q16236 EXPRESSION TAG SEQRES 1 A 90 MET GLY HIS HIS HIS HIS HIS HIS SER HIS MET LYS HIS SEQRES 2 A 90 SER SER ARG LEU GLU ALA HIS LEU THR ARG ASP GLU LEU SEQRES 3 A 90 ARG ALA LYS ALA LEU HIS ILE PRO PHE PRO VAL GLU LYS SEQRES 4 A 90 ILE ILE ASN LEU PRO VAL VAL ASP PHE ASN GLU MET MET SEQRES 5 A 90 SER LYS GLU GLN PHE ASN GLU ALA GLN LEU ALA LEU ILE SEQRES 6 A 90 ARG ASP ILE ARG ARG ARG GLY LYS ASN LYS VAL ALA ALA SEQRES 7 A 90 GLN ASN CYS ARG LYS ARG LYS LEU GLU ASN ILE VAL HELIX 1 1 THR A 22 HIS A 32 1 11 HELIX 2 2 PRO A 36 LEU A 43 1 8 HELIX 3 3 PRO A 44 GLU A 55 1 12 HELIX 4 4 ASN A 58 GLY A 72 1 15 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1