HEADER METAL BINDING PROTEIN/METAL TRANSPORT 29-OCT-12 2M0J TITLE 3D STRUCTURE OF CALMODULIN AND CALMODULIN BINDING DOMAIN OF OLFACTORY TITLE 2 CYCLIC NUCLEOTIDE-GATED ION CHANNEL COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: CALMODULIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CAM; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: PEPTIDE FROM CYCLIC NUCLEOTIDE-GATED OLFACTORY CHANNEL; COMPND 8 CHAIN: B; COMPND 9 FRAGMENT: UNP RESIDUES 60-87; COMPND 10 SYNONYM: CYCLIC NUCLEOTIDE-GATED CATION CHANNEL 2, CYCLIC NUCLEOTIDE- COMPND 11 GATED CHANNEL ALPHA-2, CNG CHANNEL ALPHA-2, CNG-2, CNG2, CYCLIC COMPND 12 NUCLEOTIDE-GATED OLFACTORY CHANNEL SUBUNIT OCNC1; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CALM1, CALM, CAM, CAM1, CALM2, CAM2, CAMB, CALM3, CALML2, SOURCE 6 CAM3, CAMC, CAMIII; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET29C; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 13 ORGANISM_COMMON: RAT; SOURCE 14 ORGANISM_TAXID: 10116; SOURCE 15 GENE: CNGA2, CNCG2; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 19 EXPRESSION_SYSTEM_VECTOR: PET29C KEYWDS CALMODULIN, CYCLIC OLFACTORY NUCLEOTIDE-GATED ION CHANNEL, METAL KEYWDS 2 BINDING PROTEIN-METAL TRANSPORT COMPLEX EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR I.DELI,C.CHYAN REVDAT 3 01-MAY-24 2M0J 1 REMARK LINK REVDAT 2 11-FEB-15 2M0J 1 JRNL REMARK REVDAT 1 30-OCT-13 2M0J 0 JRNL AUTH D.IRENE,J.W.HUANG,T.Y.CHUNG,F.Y.LI,J.T.TZEN,T.H.LIN, JRNL AUTH 2 C.L.CHYAN JRNL TITL BINDING ORIENTATION AND SPECIFICITY OF CALMODULIN TO RAT JRNL TITL 2 OLFACTORY CYCLIC NUCLEOTIDE-GATED ION CHANNEL JRNL REF J.BIOMOL.STRUCT.DYN. V. 31 414 2013 JRNL REFN ISSN 0739-1102 JRNL PMID 22877078 JRNL DOI 10.1080/07391102.2012.703069 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.IRENE,F.H.SUNG,J.W.HUANG,T.H.LIN,Y.C.CHEN,C.L.CHYAN REMARK 1 TITL RESONANCE ASSIGNMENTS AND SECONDARY STRUCTURE OF CALMODULIN REMARK 1 TITL 2 IN COMPLEX WITH ITS TARGET SEQUENCE IN RAT OLFACTORY CYCLIC REMARK 1 TITL 3 NUCLEOTIDE-GATED ION CHANNEL REMARK 1 REF BIOMOL.NMR ASSIGN. V. 8 97 2014 REMARK 1 REFN ISSN 1874-2718 REMARK 1 PMID 23315338 REMARK 1 DOI 10.1007/S12104-013-9461-Y REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : AURELIA, CYANA REMARK 3 AUTHORS : NEIDIG, GEYER, GORLER, ANTZ, SAFFRICH, BENEICKE, REMARK 3 KALBITZER (AURELIA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2M0J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1000103055. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 310 REMARK 210 PH : 6.7 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : 1 MM [U-99% 13C; U-99% 15N] CAM REMARK 210 -OLFP-1, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 2D 1H-1H TOCSY; 2D DQF-COSY; 2D REMARK 210 1H-1H NOESY; 3D HNCA; 3D HN(CO) REMARK 210 CA; 3D HNCO; 3D HN(CA)CO; 3D REMARK 210 HNCACB; 3D C(CO)NH; 3D HBHA(CO) REMARK 210 NH; 3D H(CCO)NH; 3D HCCH-TOCSY; REMARK 210 3D HCCH-COSY; 3D 1H-15N TOCSY; REMARK 210 3D 1H-13C15N SIMULTANEOUS REMARK 210 COEVOLUTION NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PHE A 19 -70.14 -53.71 REMARK 500 1 ASN A 42 56.86 -162.16 REMARK 500 1 LYS A 77 41.21 -179.63 REMARK 500 1 THR A 79 -168.63 -60.95 REMARK 500 1 ASP A 80 177.85 -55.19 REMARK 500 1 GLU A 114 -79.73 -114.93 REMARK 500 1 THR A 146 -143.11 -124.68 REMARK 500 1 ALA A 147 -168.63 53.51 REMARK 500 1 ASN B 83 -91.77 -81.06 REMARK 500 1 LYS B 84 -173.45 177.75 REMARK 500 1 ASN B 85 90.58 67.37 REMARK 500 2 ASN A 42 56.65 -161.50 REMARK 500 2 LYS A 77 74.48 175.41 REMARK 500 2 ASP A 78 -164.74 -166.60 REMARK 500 2 ASP A 80 -175.85 -57.44 REMARK 500 2 PHE A 92 -70.71 -78.44 REMARK 500 2 GLU A 114 -78.95 -115.49 REMARK 500 2 THR A 146 72.74 -150.57 REMARK 500 2 ALA A 147 -172.88 -175.53 REMARK 500 2 ASN B 83 -79.53 -85.57 REMARK 500 2 LYS B 84 -168.82 -56.46 REMARK 500 3 PHE A 19 -70.43 -53.70 REMARK 500 3 ASN A 42 56.80 -161.83 REMARK 500 3 LYS A 77 42.79 176.95 REMARK 500 3 THR A 79 -169.50 -61.45 REMARK 500 3 ASP A 80 179.77 -56.98 REMARK 500 3 GLU A 114 -80.35 -113.14 REMARK 500 3 THR A 146 -65.60 -122.92 REMARK 500 3 ALA A 147 -177.03 -50.25 REMARK 500 3 PRO B 61 -72.83 -57.28 REMARK 500 3 ASN B 83 -80.15 -85.34 REMARK 500 3 LYS B 84 -175.94 -57.16 REMARK 500 4 PHE A 19 -70.03 -53.78 REMARK 500 4 ASN A 42 56.44 -161.21 REMARK 500 4 THR A 79 -169.78 -60.81 REMARK 500 4 ASP A 80 178.00 -56.85 REMARK 500 4 GLU A 114 -79.78 -114.68 REMARK 500 4 THR A 146 74.67 -150.94 REMARK 500 4 ALA A 147 -173.43 -175.73 REMARK 500 4 PRO B 61 -71.87 -57.48 REMARK 500 4 ASN B 83 -94.85 -84.16 REMARK 500 4 LYS B 84 -172.76 177.23 REMARK 500 4 ASN B 85 91.41 69.24 REMARK 500 5 LEU A 4 153.97 -48.86 REMARK 500 5 PHE A 19 -70.30 -53.75 REMARK 500 5 ASN A 42 56.96 -162.29 REMARK 500 5 LYS A 77 40.84 -177.49 REMARK 500 5 THR A 79 -170.37 -69.17 REMARK 500 5 ASP A 80 175.22 -56.93 REMARK 500 5 GLU A 114 -79.28 -116.82 REMARK 500 REMARK 500 THIS ENTRY HAS 217 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 20 OD2 REMARK 620 2 ASP A 20 OD1 50.7 REMARK 620 3 ASP A 22 OD1 78.0 124.1 REMARK 620 4 ASP A 22 OD2 86.6 130.8 50.6 REMARK 620 5 ASP A 24 OD1 57.9 79.6 92.0 54.6 REMARK 620 6 ASP A 24 OD2 100.9 86.0 129.5 78.9 50.8 REMARK 620 7 GLU A 31 OE2 88.1 58.5 105.7 156.3 137.7 124.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 56 OD1 REMARK 620 2 ASP A 56 OD2 50.8 REMARK 620 3 ASP A 58 OD1 82.8 78.0 REMARK 620 4 ASP A 58 OD2 94.2 122.9 50.8 REMARK 620 5 ASN A 60 OD1 109.9 59.9 74.8 116.8 REMARK 620 6 THR A 62 O 69.1 54.9 132.9 160.1 80.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 203 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 93 OD1 REMARK 620 2 ASP A 93 OD2 51.0 REMARK 620 3 ASP A 95 OD1 71.6 60.3 REMARK 620 4 ASP A 95 OD2 110.4 66.6 51.1 REMARK 620 5 ASN A 97 OD1 93.8 57.5 108.2 73.6 REMARK 620 6 TYR A 99 O 52.9 78.3 124.1 140.7 72.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 204 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 99 OH REMARK 620 2 ASP A 129 OD2 119.0 REMARK 620 3 ASP A 129 OD1 137.2 50.8 REMARK 620 4 ASP A 131 OD1 127.1 112.5 71.5 REMARK 620 5 ASP A 131 OD2 107.0 120.5 112.6 50.9 REMARK 620 6 ASP A 133 OD2 55.1 108.4 157.9 118.2 68.9 REMARK 620 7 ASP A 133 OD1 104.9 79.2 111.6 95.1 52.8 50.3 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 204 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 17771 RELATED DB: BMRB REMARK 900 RELATED ID: 2M0K RELATED DB: PDB DBREF 2M0J A 1 148 UNP P62158 CALM_HUMAN 2 149 DBREF 2M0J B 60 87 UNP Q00195 CNGA2_RAT 60 87 SEQRES 1 A 148 ALA ASP GLN LEU THR GLU GLU GLN ILE ALA GLU PHE LYS SEQRES 2 A 148 GLU ALA PHE SER LEU PHE ASP LYS ASP GLY ASP GLY THR SEQRES 3 A 148 ILE THR THR LYS GLU LEU GLY THR VAL MET ARG SER LEU SEQRES 4 A 148 GLY GLN ASN PRO THR GLU ALA GLU LEU GLN ASP MET ILE SEQRES 5 A 148 ASN GLU VAL ASP ALA ASP GLY ASN GLY THR ILE ASP PHE SEQRES 6 A 148 PRO GLU PHE LEU THR MET MET ALA ARG LYS MET LYS ASP SEQRES 7 A 148 THR ASP SER GLU GLU GLU ILE ARG GLU ALA PHE ARG VAL SEQRES 8 A 148 PHE ASP LYS ASP GLY ASN GLY TYR ILE SER ALA ALA GLU SEQRES 9 A 148 LEU ARG HIS VAL MET THR ASN LEU GLY GLU LYS LEU THR SEQRES 10 A 148 ASP GLU GLU VAL ASP GLU MET ILE ARG GLU ALA ASP ILE SEQRES 11 A 148 ASP GLY ASP GLY GLN VAL ASN TYR GLU GLU PHE VAL GLN SEQRES 12 A 148 MET MET THR ALA LYS SEQRES 1 B 28 THR PRO ARG ARG GLY ARG GLY GLY PHE GLN ARG ILE VAL SEQRES 2 B 28 ARG LEU VAL GLY VAL ILE ARG ASP TRP ALA ASN LYS ASN SEQRES 3 B 28 PHE ARG HET CA A 201 1 HET CA A 202 1 HET CA A 203 1 HET CA A 204 1 HETNAM CA CALCIUM ION FORMUL 3 CA 4(CA 2+) HELIX 1 1 THR A 5 ASP A 20 1 16 HELIX 2 2 THR A 29 GLY A 40 1 12 HELIX 3 3 THR A 44 ASP A 56 1 13 HELIX 4 4 ASP A 64 MET A 76 1 13 HELIX 5 5 SER A 81 ASP A 93 1 13 HELIX 6 6 ALA A 102 GLY A 113 1 12 HELIX 7 7 THR A 117 GLU A 127 1 11 HELIX 8 8 ASN A 137 THR A 146 1 10 HELIX 9 9 ARG B 65 ASN B 83 1 19 SHEET 1 A 2 ILE A 27 THR A 28 0 SHEET 2 A 2 THR A 62 ILE A 63 -1 O ILE A 63 N ILE A 27 SHEET 1 B 2 ILE A 100 SER A 101 0 SHEET 2 B 2 GLN A 135 VAL A 136 -1 O VAL A 136 N ILE A 100 LINK OD2 ASP A 20 CA CA A 201 1555 1555 2.56 LINK OD1 ASP A 20 CA CA A 201 1555 1555 2.57 LINK OD1 ASP A 22 CA CA A 201 1555 1555 2.55 LINK OD2 ASP A 22 CA CA A 201 1555 1555 2.58 LINK OD1 ASP A 24 CA CA A 201 1555 1555 2.55 LINK OD2 ASP A 24 CA CA A 201 1555 1555 2.56 LINK OE2 GLU A 31 CA CA A 201 1555 1555 3.06 LINK OD1 ASP A 56 CA CA A 202 1555 1555 2.53 LINK OD2 ASP A 56 CA CA A 202 1555 1555 2.58 LINK OD1 ASP A 58 CA CA A 202 1555 1555 2.55 LINK OD2 ASP A 58 CA CA A 202 1555 1555 2.56 LINK OD1 ASN A 60 CA CA A 202 1555 1555 2.51 LINK O THR A 62 CA CA A 202 1555 1555 2.78 LINK OD1 ASP A 93 CA CA A 203 1555 1555 2.54 LINK OD2 ASP A 93 CA CA A 203 1555 1555 2.56 LINK OD1 ASP A 95 CA CA A 203 1555 1555 2.55 LINK OD2 ASP A 95 CA CA A 203 1555 1555 2.55 LINK OD1 ASN A 97 CA CA A 203 1555 1555 2.52 LINK O TYR A 99 CA CA A 203 1555 1555 2.95 LINK OH TYR A 99 CA CA A 204 1555 1555 2.80 LINK OD2 ASP A 129 CA CA A 204 1555 1555 2.56 LINK OD1 ASP A 129 CA CA A 204 1555 1555 2.55 LINK OD1 ASP A 131 CA CA A 204 1555 1555 2.51 LINK OD2 ASP A 131 CA CA A 204 1555 1555 2.59 LINK OD2 ASP A 133 CA CA A 204 1555 1555 2.57 LINK OD1 ASP A 133 CA CA A 204 1555 1555 2.58 SITE 1 AC1 4 ASP A 20 ASP A 22 ASP A 24 GLU A 31 SITE 1 AC2 5 ASP A 56 ASP A 58 ASN A 60 THR A 62 SITE 2 AC2 5 ASP A 64 SITE 1 AC3 4 ASP A 93 ASP A 95 ASN A 97 TYR A 99 SITE 1 AC4 5 TYR A 99 ASP A 129 ASP A 131 ASP A 133 SITE 2 AC4 5 ASN A 137 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1