data_2M0Z # _entry.id 2M0Z # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2M0Z RCSB RCSB103071 BMRB 18833 WWPDB D_1000103071 # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.content_type _pdbx_database_related.details 2M10 PDB unspecified . 18833 BMRB unspecified . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2M0Z _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-11-09 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Walser, R.' 1 'Zerbe, O.' 2 'Hamm, P.' 3 # _citation.id primary _citation.title 'Kinetic response of a photoperturbed allosteric protein.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 110 _citation.page_first 11725 _citation.page_last 11730 _citation.year 2013 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23818626 _citation.pdbx_database_id_DOI 10.1073/pnas.1306323110 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Buchli, B.' 1 primary 'Waldauer, S.A.' 2 primary 'Walser, R.' 3 primary 'Donten, M.L.' 4 primary 'Pfister, R.' 5 primary 'Blochliger, N.' 6 primary 'Steiner, S.' 7 primary 'Caflisch, A.' 8 primary 'Zerbe, O.' 9 primary 'Hamm, P.' 10 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Tyrosine-protein phosphatase non-receptor type 13' 10067.399 1 3.1.3.48 'S1381C, E1436C' 'PDZ 2 domain residues 1361-1456' ? 2 non-polymer syn ;3,3'-(E)-diazene-1,2-diylbis{6-[(chloroacetyl)amino]benzenesulfonic acid} ; 525.340 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Fas-associated protein-tyrosine phosphatase 1, FAP-1, PTP-BAS, Protein-tyrosine phosphatase 1E, PTP-E1, hPTPE1, Protein-tyrosine phosphatase PTPL1 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPKPGDIFEVELAKNDNSLGICVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVCTLR NTGQVVHLLLEKGQSPT ; _entity_poly.pdbx_seq_one_letter_code_can ;GPKPGDIFEVELAKNDNSLGICVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVCTLR NTGQVVHLLLEKGQSPT ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LYS n 1 4 PRO n 1 5 GLY n 1 6 ASP n 1 7 ILE n 1 8 PHE n 1 9 GLU n 1 10 VAL n 1 11 GLU n 1 12 LEU n 1 13 ALA n 1 14 LYS n 1 15 ASN n 1 16 ASP n 1 17 ASN n 1 18 SER n 1 19 LEU n 1 20 GLY n 1 21 ILE n 1 22 CYS n 1 23 VAL n 1 24 THR n 1 25 GLY n 1 26 GLY n 1 27 VAL n 1 28 ASN n 1 29 THR n 1 30 SER n 1 31 VAL n 1 32 ARG n 1 33 HIS n 1 34 GLY n 1 35 GLY n 1 36 ILE n 1 37 TYR n 1 38 VAL n 1 39 LYS n 1 40 ALA n 1 41 VAL n 1 42 ILE n 1 43 PRO n 1 44 GLN n 1 45 GLY n 1 46 ALA n 1 47 ALA n 1 48 GLU n 1 49 SER n 1 50 ASP n 1 51 GLY n 1 52 ARG n 1 53 ILE n 1 54 HIS n 1 55 LYS n 1 56 GLY n 1 57 ASP n 1 58 ARG n 1 59 VAL n 1 60 LEU n 1 61 ALA n 1 62 VAL n 1 63 ASN n 1 64 GLY n 1 65 VAL n 1 66 SER n 1 67 LEU n 1 68 GLU n 1 69 GLY n 1 70 ALA n 1 71 THR n 1 72 HIS n 1 73 LYS n 1 74 GLN n 1 75 ALA n 1 76 VAL n 1 77 CYS n 1 78 THR n 1 79 LEU n 1 80 ARG n 1 81 ASN n 1 82 THR n 1 83 GLY n 1 84 GLN n 1 85 VAL n 1 86 VAL n 1 87 HIS n 1 88 LEU n 1 89 LEU n 1 90 LEU n 1 91 GLU n 1 92 LYS n 1 93 GLY n 1 94 GLN n 1 95 SER n 1 96 PRO n 1 97 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PTPN13, PNP1, PTP1E, PTPL1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector 'pET30a(+)' _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PTN13_HUMAN _struct_ref.pdbx_db_accession Q12923 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PKPGDIFEVELAKNDNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN TGQVVHLLLEKGQSPT ; _struct_ref.pdbx_align_begin 1361 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2M0Z _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 97 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q12923 _struct_ref_seq.db_align_beg 1361 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1456 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 97 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2M0Z GLY A 1 ? UNP Q12923 ? ? 'EXPRESSION TAG' 1 1 1 2M0Z CYS A 22 ? UNP Q12923 SER 1381 'ENGINEERED MUTATION' 22 2 1 2M0Z CYS A 77 ? UNP Q12923 GLU 1436 'ENGINEERED MUTATION' 77 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 33B non-polymer . ;3,3'-(E)-diazene-1,2-diylbis{6-[(chloroacetyl)amino]benzenesulfonic acid} ; ? 'C16 H14 Cl2 N4 O8 S2' 525.340 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 3 '2D 1H-15N HSQC' 1 2 3 '2D 1H-13C HSQC aliphatic' 1 3 3 '2D 1H-13C HSQC aromatic' 1 4 3 '3D CBCA(CO)NH' 1 5 3 '3D HNCO' 1 6 3 '3D HNCACB' 1 7 3 '3D HCCH-TOCSY' 1 8 3 '3D C(CO)NH' 1 9 3 '3D 1H-15N NOESY' 1 10 3 '3D 1H-13C NOESY aliphatic' 1 11 2 '2D 1H-15N HSQC' 1 12 1 '2D 1H-15N HSQC' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.2 _pdbx_nmr_exptl_sample_conditions.pH 6.8 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system ;0.75 mM [U-100% 15N] protein, 50 mM sodium phosphate, 150 mM sodium chloride, 0.1 mM sodium azide, 4.3 % C12E5, 1.8 % n-hexanol, 90% H2O/10% D2O ; 1 '90% H2O/10% D2O' ;0.75 mM [U-100% 15N] protein, 50 mM sodium phosphate, 150 mM sodium chloride, 0.1 mM sodium azide, 8.5 mg/mL Pf1 phage, 90% H2O/10% D2O ; 2 '90% H2O/10% D2O' '0.75 mM [U-99% 13C; U-99% 15N] protein, 50 mM sodium phosphate, 150 mM sodium chloride, 0.1 mM sodium azide, 90% H2O/10% D2O' 3 '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 600 Bruker Avance 1 'Bruker Avance' 700 Bruker Avance 2 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2M0Z _pdbx_nmr_refine.method 'torsion angle dynamics, molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2M0Z _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2M0Z _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Bruker Biospin' collection TOPSPIN 2.1 1 'Bruker Biospin' processing TOPSPIN 2.1 2 'Keller and Wuthrich' 'chemical shift assignment' Cara 1.9.0b3 3 'Cornilescu, Delaglio and Bax' 'data analysis' TALOS '3.80F1 Rev 2012.080.14.41' 4 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA 3.0 5 'Schwieters, Kuszewski, Tjandra and Clore' refinement X-PLOR_NIH 2.32 6 'Laskowski and MacArthur' 'data analysis' ProcheckNMR ? 7 Vriend 'data analysis' WhatIF ? 8 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2M0Z _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2M0Z _struct.title 'cis form of a photoswitchable PDZ domain crosslinked with an azobenzene derivative' _struct.pdbx_descriptor 'Tyrosine-protein phosphatase non-receptor type 13 (E.C.3.1.3.48)' _struct.pdbx_model_details 'lowest energy, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2M0Z _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'photoswitch, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 45 ? GLY A 51 ? GLY A 45 GLY A 51 1 ? 7 HELX_P HELX_P2 2 THR A 71 ? THR A 82 ? THR A 71 THR A 82 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A CYS 22 SG ? ? ? 1_555 B 33B . C1 ? ? A CYS 22 A 33B 101 1_555 ? ? ? ? ? ? ? 1.832 ? covale2 covale ? ? A CYS 77 SG ? ? ? 1_555 B 33B . C20 ? ? A CYS 77 A 33B 101 1_555 ? ? ? ? ? ? ? 1.851 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 7 ? ALA A 13 ? ILE A 7 ALA A 13 A 2 VAL A 85 ? GLU A 91 ? VAL A 85 GLU A 91 A 3 ARG A 58 ? VAL A 62 ? ARG A 58 VAL A 62 A 4 ILE A 36 ? VAL A 41 ? ILE A 36 VAL A 41 A 5 ILE A 21 ? THR A 24 ? ILE A 21 THR A 24 B 1 ILE A 7 ? ALA A 13 ? ILE A 7 ALA A 13 B 2 VAL A 85 ? GLU A 91 ? VAL A 85 GLU A 91 B 3 ARG A 58 ? VAL A 62 ? ARG A 58 VAL A 62 B 4 VAL A 65 ? SER A 66 ? VAL A 65 SER A 66 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 10 ? N VAL A 10 O LEU A 88 ? O LEU A 88 A 2 3 O LEU A 89 ? O LEU A 89 N LEU A 60 ? N LEU A 60 A 3 4 O VAL A 59 ? O VAL A 59 N ILE A 36 ? N ILE A 36 A 4 5 O LYS A 39 ? O LYS A 39 N CYS A 22 ? N CYS A 22 B 1 2 N VAL A 10 ? N VAL A 10 O LEU A 88 ? O LEU A 88 B 2 3 O LEU A 89 ? O LEU A 89 N LEU A 60 ? N LEU A 60 B 3 4 N VAL A 62 ? N VAL A 62 O VAL A 65 ? O VAL A 65 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'BINDING SITE FOR RESIDUE 33B A 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 CYS A 22 ? CYS A 22 . ? 1_555 ? 2 AC1 6 LYS A 39 ? LYS A 39 . ? 1_555 ? 3 AC1 6 ALA A 40 ? ALA A 40 . ? 1_555 ? 4 AC1 6 LYS A 73 ? LYS A 73 . ? 1_555 ? 5 AC1 6 CYS A 77 ? CYS A 77 . ? 1_555 ? 6 AC1 6 ARG A 80 ? ARG A 80 . ? 1_555 ? # _atom_sites.entry_id 2M0Z _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 LYS 3 3 3 LYS LYS A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 GLY 5 5 5 GLY GLY A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 PHE 8 8 8 PHE PHE A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 ASN 15 15 15 ASN ASN A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 ASN 17 17 17 ASN ASN A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 ILE 21 21 21 ILE ILE A . n A 1 22 CYS 22 22 22 CYS CYS A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 THR 24 24 24 THR THR A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 VAL 27 27 27 VAL VAL A . n A 1 28 ASN 28 28 28 ASN ASN A . n A 1 29 THR 29 29 29 THR THR A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 ARG 32 32 32 ARG ARG A . n A 1 33 HIS 33 33 33 HIS HIS A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 TYR 37 37 37 TYR TYR A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 LYS 39 39 39 LYS LYS A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 PRO 43 43 43 PRO PRO A . n A 1 44 GLN 44 44 44 GLN GLN A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 SER 49 49 49 SER SER A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 ARG 52 52 52 ARG ARG A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 HIS 54 54 54 HIS HIS A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 ASP 57 57 57 ASP ASP A . n A 1 58 ARG 58 58 58 ARG ARG A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 ASN 63 63 63 ASN ASN A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 SER 66 66 66 SER SER A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 GLU 68 68 68 GLU GLU A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 HIS 72 72 72 HIS HIS A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 GLN 74 74 74 GLN GLN A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 VAL 76 76 76 VAL VAL A . n A 1 77 CYS 77 77 77 CYS CYS A . n A 1 78 THR 78 78 78 THR THR A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 ARG 80 80 80 ARG ARG A . n A 1 81 ASN 81 81 81 ASN ASN A . n A 1 82 THR 82 82 82 THR THR A . n A 1 83 GLY 83 83 83 GLY GLY A . n A 1 84 GLN 84 84 84 GLN GLN A . n A 1 85 VAL 85 85 85 VAL VAL A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 HIS 87 87 87 HIS HIS A . n A 1 88 LEU 88 88 88 LEU LEU A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 GLU 91 91 91 GLU GLU A . n A 1 92 LYS 92 92 92 LYS LYS A . n A 1 93 GLY 93 93 93 GLY GLY A . n A 1 94 GLN 94 94 94 GLN GLN A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 PRO 96 96 96 PRO PRO A . n A 1 97 THR 97 97 97 THR THR A . n # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id 33B _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 101 _pdbx_nonpoly_scheme.auth_seq_num 98 _pdbx_nonpoly_scheme.pdb_mon_id 33B _pdbx_nonpoly_scheme.auth_mon_id 33B _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-07-03 2 'Structure model' 1 1 2013-07-17 3 'Structure model' 1 2 2013-07-24 4 'Structure model' 1 3 2013-08-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id entity_1-1 0.75 ? mM '[U-100% 15N]' 1 'sodium phosphate-2' 50 ? mM ? 1 'sodium chloride-3' 150 ? mM ? 1 'sodium azide-4' 0.1 ? mM ? 1 C12E5-5 4.3 ? % ? 1 n-hexanol-6 1.8 ? % ? 1 entity_1-7 0.75 ? mM '[U-100% 15N]' 2 'sodium phosphate-8' 50 ? mM ? 2 'sodium chloride-9' 150 ? mM ? 2 'sodium azide-10' 0.1 ? mM ? 2 'Pf1 phage-11' 8.5 ? mg/mL ? 2 entity_1-12 0.75 ? mM '[U-99% 13C; U-99% 15N]' 3 'sodium phosphate-13' 50 ? mM ? 3 'sodium chloride-14' 150 ? mM ? 3 'sodium azide-15' 0.1 ? mM ? 3 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 2 O A LEU 79 ? ? HG1 A THR 82 ? ? 1.59 2 3 OD1 A ASP 57 ? ? HZ1 A LYS 92 ? ? 1.58 3 3 HD1 A HIS 54 ? ? OD2 A ASP 57 ? ? 1.59 4 12 O A LEU 79 ? ? HG1 A THR 82 ? ? 1.58 5 12 HZ3 A LYS 14 ? ? O A GLY 83 ? ? 1.59 6 17 OD2 A ASP 16 ? ? HG A SER 49 ? ? 1.59 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 18 ? ? -44.88 156.65 2 1 ASN A 28 ? ? 87.31 65.52 3 2 LYS A 14 ? ? -89.99 35.36 4 2 VAL A 27 ? ? -73.27 20.53 5 2 ASN A 28 ? ? 89.93 66.04 6 3 LYS A 14 ? ? -95.37 34.64 7 3 ASP A 16 ? ? -86.98 -131.26 8 3 ASN A 17 ? ? -126.98 -51.23 9 3 VAL A 27 ? ? -59.85 18.00 10 3 ASN A 28 ? ? 86.44 64.34 11 3 PRO A 96 ? ? -56.95 106.93 12 4 LYS A 14 ? ? -86.50 32.51 13 4 ASP A 16 ? ? -81.28 -154.43 14 4 VAL A 27 ? ? -67.79 20.34 15 4 ASN A 28 ? ? 88.30 64.57 16 5 LYS A 14 ? ? -80.67 33.71 17 5 ASP A 16 ? ? -65.60 -89.56 18 5 ASN A 17 ? ? 165.49 -32.71 19 5 VAL A 27 ? ? -69.39 19.67 20 5 ASN A 28 ? ? 88.37 65.60 21 6 ASP A 16 ? ? -175.19 -171.25 22 6 VAL A 27 ? ? -66.31 20.66 23 6 ASN A 28 ? ? 88.71 66.41 24 7 LYS A 14 ? ? -92.52 33.74 25 7 ASN A 15 ? ? 6.05 -91.95 26 7 ASN A 17 ? ? 74.14 -120.24 27 7 VAL A 27 ? ? -61.98 21.14 28 7 ASN A 28 ? ? 87.37 66.29 29 8 LYS A 14 ? ? -91.98 31.96 30 8 ASN A 15 ? ? 18.19 51.19 31 8 ASP A 16 ? ? 11.31 58.73 32 8 ASN A 17 ? ? -145.69 -116.54 33 8 VAL A 27 ? ? -68.08 18.56 34 8 ASN A 28 ? ? 86.92 65.83 35 8 LEU A 67 ? ? 34.25 38.20 36 9 LYS A 14 ? ? -86.49 33.61 37 9 ASP A 16 ? ? -176.72 -130.62 38 9 ASN A 17 ? ? -150.45 -45.81 39 9 VAL A 27 ? ? -66.48 19.69 40 9 ASN A 28 ? ? 85.52 64.03 41 9 SER A 30 ? ? -38.42 -38.49 42 9 LEU A 67 ? ? 38.09 38.45 43 10 LYS A 14 ? ? -86.96 33.76 44 10 ASP A 16 ? ? -73.15 -153.21 45 10 VAL A 27 ? ? -66.92 19.20 46 10 ASN A 28 ? ? 87.04 66.35 47 10 PRO A 96 ? ? -66.02 -177.12 48 11 LYS A 14 ? ? -92.06 31.49 49 11 ASP A 16 ? ? -79.47 -83.10 50 11 SER A 18 ? ? -47.67 152.99 51 11 VAL A 27 ? ? -64.04 19.43 52 11 ASN A 28 ? ? 86.23 65.24 53 11 SER A 30 ? ? -27.88 -49.46 54 12 LYS A 14 ? ? -93.43 31.05 55 12 SER A 18 ? ? -46.23 150.79 56 12 VAL A 27 ? ? -61.21 20.29 57 12 ASN A 28 ? ? 88.32 65.08 58 12 PRO A 43 ? ? -58.52 109.12 59 12 GLN A 44 ? ? 70.15 30.28 60 13 LYS A 14 ? ? -90.20 35.07 61 13 VAL A 27 ? ? -69.21 19.46 62 13 ASN A 28 ? ? 87.82 65.58 63 14 LYS A 14 ? ? -84.64 33.60 64 14 VAL A 27 ? ? -70.75 20.23 65 14 ASN A 28 ? ? 87.32 66.21 66 15 LYS A 14 ? ? -120.89 -72.71 67 15 ASN A 15 ? ? 170.73 -171.57 68 15 ASN A 17 ? ? -167.31 -110.57 69 15 VAL A 27 ? ? -67.04 20.89 70 15 ASN A 28 ? ? 87.20 65.19 71 16 LYS A 14 ? ? -95.12 31.59 72 16 SER A 18 ? ? -53.17 173.18 73 16 VAL A 27 ? ? -69.18 19.02 74 16 ASN A 28 ? ? 88.68 68.17 75 17 LYS A 14 ? ? -87.72 34.33 76 17 VAL A 27 ? ? -53.56 20.92 77 17 ASN A 28 ? ? 86.91 66.13 78 18 ASP A 16 ? ? -139.13 -133.16 79 18 ASN A 17 ? ? -135.18 -55.68 80 18 VAL A 27 ? ? -67.36 19.76 81 18 ASN A 28 ? ? 88.50 65.79 82 19 ASN A 17 ? ? -176.56 -148.64 83 19 ASN A 28 ? ? 87.58 64.47 84 19 LEU A 67 ? ? 38.79 45.11 85 20 ASP A 16 ? ? -59.36 -71.85 86 20 SER A 18 ? ? -45.44 176.34 87 20 VAL A 27 ? ? -68.99 19.64 88 20 ASN A 28 ? ? 88.05 66.99 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 4 ARG A 52 ? ? 0.103 'SIDE CHAIN' 2 10 ARG A 52 ? ? 0.076 'SIDE CHAIN' # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name ;3,3'-(E)-diazene-1,2-diylbis{6-[(chloroacetyl)amino]benzenesulfonic acid} ; _pdbx_entity_nonpoly.comp_id 33B #