HEADER HORMONE 26-NOV-12 2M1D TITLE BIOSYNTHETIC ENGINEERED B28K-B29P HUMAN INSULIN MONOMER STRUCTURE IN TITLE 2 IN WATER/ACETONITRILE SOLUTIONS. COMPND MOL_ID: 1; COMPND 2 MOLECULE: INSULIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: INSULIN B CHAIN, INSULIN A CHAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: INSULIN; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: INSULIN B CHAIN, INSULIN A CHAIN; COMPND 10 ENGINEERED: YES; COMPND 11 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 SYNTHETIC: YES KEYWDS HUMAN INSULIN, HORMONE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR W.BOCIAN,L.KOZERSKI REVDAT 2 22-MAY-13 2M1D 1 JRNL REVDAT 1 27-FEB-13 2M1D 0 JRNL AUTH P.BOROWICZ,W.BOCIAN,J.SITKOWSKI,E.BEDNAREK, JRNL AUTH 2 D.MIKIEWICZ-SYGULA,D.KURZYNOGA,D.STADNIK, JRNL AUTH 3 W.SURMACZ-CHWEDORUK,W.KOZMINSKI,L.KOZERSKI JRNL TITL BIOSYNTHETIC ENGINEERED B28(K)-B29(P) HUMAN INSULIN MONOMER JRNL TITL 2 STRUCTURE IN WATER AND IN WATER/ACETONITRILE SOLUTIONS. JRNL REF J.BIOMOL.NMR V. 55 303 2013 JRNL REFN ISSN 0925-2738 JRNL PMID 23404086 JRNL DOI 10.1007/S10858-013-9713-2 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : AMBER 11, CYANA 2.1 REMARK 3 AUTHORS : CASE, DARDEN, CHEATHAM, III, SIMMERLING, WANG, REMARK 3 DUKE, LUO, AND KOLLMAN (AMBER), GUNTERT, REMARK 3 MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2M1D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-NOV-12. REMARK 100 THE RCSB ID CODE IS RCSB103085. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 2.5 REMARK 210 IONIC STRENGTH : 1 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 2.5 - 3.0 MM INSULIN, RESIDUES REMARK 210 90-110, 2.5 - 3.0 MM INSULIN, REMARK 210 RESIDUES 25-54, 73 % H2O, 27 % REMARK 210 CD3CN, H2O / CD3CN; 2.5 - 3.0 MM REMARK 210 INSULIN, RESIDUES 90-110, 2.5 - REMARK 210 3.0 MM INSULIN, RESIDUES 25-54, REMARK 210 73 % D2O-7, 27 % CD3CN-8, D2O / REMARK 210 CD3CN REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H TOCSY; 2D 1H-1H NOESY; REMARK 210 2D 1H-13C HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : UNIFORM NMR SYSTEM REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : AMBER 11, VNMRJ 2.2 C, SPARKY 2.6 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, DGSA- REMARK 210 DISTANCE GEOMETRY SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 1 ARG B 22 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 5 ARG B 22 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 10 ARG B 22 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 12 ARG B 22 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 13 TYR B 26 CB - CG - CD2 ANGL. DEV. = -4.0 DEGREES REMARK 500 14 ARG B 22 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS B 28 56.04 37.71 REMARK 500 2 ASN B 3 70.83 -118.99 REMARK 500 3 TYR B 26 31.41 -84.58 REMARK 500 5 GLU B 21 -10.79 -159.99 REMARK 500 6 VAL B 2 -46.89 51.69 REMARK 500 6 PHE B 25 -32.63 -141.62 REMARK 500 6 TYR B 26 134.24 54.84 REMARK 500 7 PHE B 24 -54.77 -139.91 REMARK 500 8 VAL B 2 -38.66 -143.11 REMARK 500 8 GLN B 4 157.84 65.45 REMARK 500 9 ASN B 3 38.35 -150.75 REMARK 500 9 TYR B 26 19.72 49.58 REMARK 500 10 THR B 27 -14.32 57.87 REMARK 500 12 PHE B 25 -35.82 -139.11 REMARK 500 12 TYR B 26 -81.63 47.80 REMARK 500 13 THR B 27 -46.19 56.17 REMARK 500 13 LYS B 28 152.79 61.82 REMARK 500 14 GLU B 21 19.61 54.08 REMARK 500 14 THR B 27 -114.92 53.03 REMARK 500 15 GLN A 5 -57.16 -123.21 REMARK 500 15 PHE B 24 -43.21 -150.67 REMARK 500 16 PHE B 25 -26.32 -140.73 REMARK 500 16 TYR B 26 -97.97 46.83 REMARK 500 18 PHE B 24 -52.70 -136.15 REMARK 500 18 THR B 27 7.74 58.61 REMARK 500 18 LYS B 28 60.63 32.86 REMARK 500 20 PHE B 24 -78.57 -134.83 REMARK 500 20 PHE B 25 71.86 49.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 6 VAL B 2 24.6 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18858 RELATED DB: BMRB DBREF 2M1D A 1 21 UNP P01308 INS_HUMAN 90 110 DBREF 2M1D B 1 30 UNP P01308 INS_HUMAN 25 54 SEQADV 2M1D LYS B 28 UNP P01308 PRO 52 ENGINEERED MUTATION SEQADV 2M1D PRO B 29 UNP P01308 LYS 53 ENGINEERED MUTATION SEQRES 1 A 21 GLY ILE VAL GLU GLN CYS CYS THR SER ILE CYS SER LEU SEQRES 2 A 21 TYR GLN LEU GLU ASN TYR CYS ASN SEQRES 1 B 30 PHE VAL ASN GLN HIS LEU CYS GLY SER HIS LEU VAL GLU SEQRES 2 B 30 ALA LEU TYR LEU VAL CYS GLY GLU ARG GLY PHE PHE TYR SEQRES 3 B 30 THR LYS PRO THR HELIX 1 1 GLY A 1 CYS A 7 1 7 HELIX 2 2 SER A 12 GLU A 17 1 6 HELIX 3 3 ASN A 18 CYS A 20 5 3 HELIX 4 4 GLY B 8 GLY B 20 1 13 SSBOND 1 CYS A 6 CYS A 11 1555 1555 2.03 SSBOND 2 CYS A 7 CYS B 7 1555 1555 2.04 SSBOND 3 CYS A 20 CYS B 19 1555 1555 2.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1