data_2M1F # _entry.id 2M1F # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.403 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2M1F pdb_00002m1f 10.2210/pdb2m1f/pdb RCSB RCSB103087 ? ? BMRB 18861 ? 10.13018/BMR18861 WWPDB D_1000103087 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2012-12-12 ? 2 'Structure model' 1 1 2013-10-02 ? 3 'Structure model' 1 2 2025-03-26 ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' pdbx_entry_details 6 3 'Structure model' pdbx_modification_feature 7 3 'Structure model' pdbx_nmr_software 8 3 'Structure model' pdbx_nmr_spectrometer 9 3 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_chem_comp.pdbx_synonyms' 2 3 'Structure model' '_database_2.pdbx_DOI' 3 3 'Structure model' '_database_2.pdbx_database_accession' 4 3 'Structure model' '_pdbx_entry_details.has_protein_modification' 5 3 'Structure model' '_pdbx_nmr_software.name' 6 3 'Structure model' '_pdbx_nmr_spectrometer.model' 7 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2M1F _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-11-27 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.content_type _pdbx_database_related.details 18861 BMRB unspecified . 1JOH PDB unspecified . 1OB4 PDB unspecified . 1OB6 PDB unspecified . 1OB7 PDB unspecified . 1DLZ PDB unspecified . 1IH9 PDB unspecified . 1R9U PDB unspecified . # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Shenkarev, Z.O.' 1 'Paramonov, A.S.' 2 'Gizatullina, A.K.' 3 # _citation.id primary _citation.title ;Peptaibol antiamoebin I: spatial structure, backbone dynamics, interaction with bicelles and lipid-protein nanodiscs, and pore formation in context of barrel-stave model. ; _citation.journal_abbrev Chem.Biodivers. _citation.journal_volume 10 _citation.page_first 838 _citation.page_last 863 _citation.year 2013 _citation.journal_id_ASTM ? _citation.country CH _citation.journal_id_ISSN 1612-1872 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23681729 _citation.pdbx_database_id_DOI 10.1002/cbdv.201200421 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Shenkarev, Z.O.' 1 ? primary 'Paramonov, A.S.' 2 ? primary 'Lyukmanova, E.N.' 3 ? primary 'Gizatullina, A.K.' 4 ? primary 'Zhuravleva, A.V.' 5 ? primary 'Tagaev, A.A.' 6 ? primary 'Yakimenko, Z.A.' 7 ? primary 'Telezhinskaya, I.N.' 8 ? primary 'Kirpichnikov, M.P.' 9 ? primary 'Ovchinnikova, T.V.' 10 ? primary 'Arseniev, A.S.' 11 ? # _entity.id 1 _entity.type polymer _entity.src_method nat _entity.pdbx_description 'Antiamoebin I' _entity.formula_weight 1654.991 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(ACE)F(AIB)(AIB)(AIB)(DIV)GL(AIB)(AIB)(HYP)Q(DIV)(HYP)(AIB)P(PHL)' _entity_poly.pdbx_seq_one_letter_code_can XFAAAVGLAAPQVPAPF _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 PHE n 1 3 AIB n 1 4 AIB n 1 5 AIB n 1 6 DIV n 1 7 GLY n 1 8 LEU n 1 9 AIB n 1 10 AIB n 1 11 HYP n 1 12 GLN n 1 13 DIV n 1 14 HYP n 1 15 AIB n 1 16 PRO n 1 17 PHL n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Emericellopsis minima' _entity_src_nat.pdbx_ncbi_taxonomy_id 45245 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 AIB 'L-peptide linking' n 'ALPHA-AMINOISOBUTYRIC ACID' ? 'C4 H9 N O2' 103.120 DIV 'D-peptide linking' . D-ISOVALINE ? 'C5 H11 N O2' 117.146 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HYP 'L-peptide linking' n 4-HYDROXYPROLINE HYDROXYPROLINE 'C5 H9 N O3' 131.130 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PHL 'L-peptide linking' n L-PHENYLALANINOL 'bound form of Phenylalaninal' 'C9 H13 N O' 151.206 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 1 1 ACE ACE A . n A 1 2 PHE 2 2 2 PHE PHE A . n A 1 3 AIB 3 3 3 AIB AIB A . n A 1 4 AIB 4 4 4 AIB AIB A . n A 1 5 AIB 5 5 5 AIB AIB A . n A 1 6 DIV 6 6 6 DIV DIV A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 AIB 9 9 9 AIB AIB A . n A 1 10 AIB 10 10 10 AIB AIB A . n A 1 11 HYP 11 11 11 HYP HYP A . n A 1 12 GLN 12 12 12 GLN GLN A . n A 1 13 DIV 13 13 13 DIV DIV A . n A 1 14 HYP 14 14 14 HYP HYP A . n A 1 15 AIB 15 15 15 AIB AIB A . n A 1 16 PRO 16 16 16 PRO PRO A . n A 1 17 PHL 17 17 17 PHL PHL A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2M1F _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2M1F _struct.title 'NMR Structure of Antiamoebin I (peptaibol antibiotic) bound to DMPC/DHPC bicelles' _struct.pdbx_model_details 'fewest violations, model1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2M1F _struct_keywords.pdbx_keywords ANTIBIOTIC _struct_keywords.text 'membrane-active, peptaibol, ANTIBIOTIC' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_code NOR00945 _struct_ref.db_name NOR _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession NOR00945 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code '(ACE)F(AIB)(AIB)(AIB)(DIV)GL(AIB)(AIB)(HYP)Q(DIV)(HYP)(AIB)P(PHL)' _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2M1F _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 17 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession NOR00945 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 17 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 17 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id AIB _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 5 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id HYP _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 14 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id AIB _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 5 _struct_conf.end_auth_comp_id HYP _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 14 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ACE 1 C ? ? ? 1_555 A PHE 2 N ? ? A ACE 1 A PHE 2 1_555 ? ? ? ? ? ? ? 1.329 sing ? covale2 covale both ? A PHE 2 C ? ? ? 1_555 A AIB 3 N ? ? A PHE 2 A AIB 3 1_555 ? ? ? ? ? ? ? 1.329 sing ? covale3 covale both ? A AIB 3 C ? ? ? 1_555 A AIB 4 N ? ? A AIB 3 A AIB 4 1_555 ? ? ? ? ? ? ? 1.329 sing ? covale4 covale both ? A AIB 4 C ? ? ? 1_555 A AIB 5 N ? ? A AIB 4 A AIB 5 1_555 ? ? ? ? ? ? ? 1.330 sing ? covale5 covale both ? A AIB 5 C ? ? ? 1_555 A DIV 6 N ? ? A AIB 5 A DIV 6 1_555 ? ? ? ? ? ? ? 1.330 sing ? covale6 covale both ? A DIV 6 C ? ? ? 1_555 A GLY 7 N ? ? A DIV 6 A GLY 7 1_555 ? ? ? ? ? ? ? 1.330 sing ? covale7 covale both ? A LEU 8 C ? ? ? 1_555 A AIB 9 N ? ? A LEU 8 A AIB 9 1_555 ? ? ? ? ? ? ? 1.329 sing ? covale8 covale both ? A AIB 9 C ? ? ? 1_555 A AIB 10 N ? ? A AIB 9 A AIB 10 1_555 ? ? ? ? ? ? ? 1.329 sing ? covale9 covale both ? A AIB 10 C ? ? ? 1_555 A HYP 11 N ? ? A AIB 10 A HYP 11 1_555 ? ? ? ? ? ? ? 1.342 sing ? covale10 covale both ? A HYP 11 C ? ? ? 1_555 A GLN 12 N ? ? A HYP 11 A GLN 12 1_555 ? ? ? ? ? ? ? 1.329 sing ? covale11 covale both ? A GLN 12 C ? ? ? 1_555 A DIV 13 N ? ? A GLN 12 A DIV 13 1_555 ? ? ? ? ? ? ? 1.329 sing ? covale12 covale both ? A DIV 13 C ? ? ? 1_555 A HYP 14 N ? ? A DIV 13 A HYP 14 1_555 ? ? ? ? ? ? ? 1.341 sing ? covale13 covale both ? A HYP 14 C ? ? ? 1_555 A AIB 15 N ? ? A HYP 14 A AIB 15 1_555 ? ? ? ? ? ? ? 1.329 sing ? covale14 covale both ? A AIB 15 C ? ? ? 1_555 A PRO 16 N ? ? A AIB 15 A PRO 16 1_555 ? ? ? ? ? ? ? 1.341 sing ? covale15 covale both ? A PRO 16 C ? ? ? 1_555 A PHL 17 N ? ? A PRO 16 A PHL 17 1_555 ? ? ? ? ? ? ? 1.328 sing ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 AIB A 3 ? . . . . AIB A 3 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 2 AIB A 4 ? . . . . AIB A 4 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 3 AIB A 5 ? . . . . AIB A 5 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 4 AIB A 9 ? . . . . AIB A 9 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 5 AIB A 10 ? . . . . AIB A 10 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 6 HYP A 11 ? . . . . HYP A 11 ? 1_555 . . . . . . . PRO 1 HYP Hydroxylation 'Named protein modification' 7 HYP A 14 ? . . . . HYP A 14 ? 1_555 . . . . . . . PRO 1 HYP Hydroxylation 'Named protein modification' 8 AIB A 15 ? . . . . AIB A 15 ? 1_555 . . . . . . . ALA 1 AIB Methylation 'Named protein modification' 9 PHL A 17 ? . . . . PHL A 17 ? 1_555 . . . . . . . PHE 1 PHL Deoxidation 'Named protein modification' 10 DIV A 6 ? . . . . DIV A 6 ? 1_555 . . . . . . . ? 1 DIV None 'Non-standard residue' 11 DIV A 13 ? . . . . DIV A 13 ? 1_555 . . . . . . . ? 1 DIV None 'Non-standard residue' 12 ACE A 1 ? PHE A 2 ? ACE A 1 ? 1_555 PHE A 2 ? 1_555 . . PHE 15 ACE None 'Terminal acetylation' # _pdbx_entry_details.entry_id 2M1F _pdbx_entry_details.compound_details ;ANTIAMOEBIN I IS LINEAR PEPTIDE, A MEMBER OF THE PEPTAIBOL FAMILY OF MEMBRANE CHANNEL FORMING PEPTIDES. HERE, ANTIAMOEBIN I IS REPRESENTED BY THE SEQUENCE (SEQRES) ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_molecule_features.prd_id PRD_000161 _pdbx_molecule_features.name 'Antiamoebin 1' _pdbx_molecule_features.type Peptaibol _pdbx_molecule_features.class Antibiotic _pdbx_molecule_features.details ;ANTIAMOEBIN I IS A HEXADECAMERIC HELICAL PEPTIDE. THE N-TERM IS ACETYLATED (RESIDUE 0) ; # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000161 _pdbx_molecule.asym_id A # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A AIB 3 A AIB 3 ? ALA 'ALPHA-AMINOISOBUTYRIC ACID' 2 A AIB 4 A AIB 4 ? ALA 'ALPHA-AMINOISOBUTYRIC ACID' 3 A AIB 5 A AIB 5 ? ALA 'ALPHA-AMINOISOBUTYRIC ACID' 4 A AIB 9 A AIB 9 ? ALA 'ALPHA-AMINOISOBUTYRIC ACID' 5 A AIB 10 A AIB 10 ? ALA 'ALPHA-AMINOISOBUTYRIC ACID' 6 A HYP 11 A HYP 11 ? PRO 4-HYDROXYPROLINE 7 A HYP 14 A HYP 14 ? PRO 4-HYDROXYPROLINE 8 A AIB 15 A AIB 15 ? ALA 'ALPHA-AMINOISOBUTYRIC ACID' 9 A PHL 17 A PHL 17 ? PHE L-PHENYLALANINOL # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2M1F _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2M1F _pdbx_nmr_representative.selection_criteria 'fewest violations' # _pdbx_nmr_sample_details.contents '120 mM DHPC, 30 mM DMPC, 7.5 mM acetic acid, 2.5 mM sodium acetate, 1 mM [U-100% 13C; U-100% 15N] ANTIAMOEBIN I, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id DHPC-1 120 ? mM ? 1 DMPC-2 30 ? mM ? 1 'acetic acid-3' 7.5 ? mM ? 1 'sodium acetate-4' 2.5 ? mM ? 1 'ANTIAMOEBIN I-5' 1 ? mM '[U-100% 13C; U-100% 15N]' 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pH 5.1 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 313 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '2D 1H-13C HSQC aliphatic' 1 3 1 '3D HNCO' 1 4 1 '3D HNCA' 1 5 1 '3D HNCACB' 1 6 1 '3D HNHA' 1 7 1 '3D 1H-15N NOESY' 1 8 1 '3D 1H-13C NOESY aliphatic' # _pdbx_nmr_refine.entry_id 2M1F _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Bruker Biospin' collection TopSpin ? 1 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA ? 2 'Koradi, Billeter and Wuthrich' 'data analysis' MOLMOL ? 3 'Keller and Wuthrich' 'chemical shift assignment' CARA ? 4 'Keller and Wuthrich' 'peak picking' CARA ? 5 'Guntert, Mumenthaler and Wuthrich' refinement CYANA ? 6 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACE C C N N 1 ACE O O N N 2 ACE CH3 C N N 3 ACE H H N N 4 ACE H1 H N N 5 ACE H2 H N N 6 ACE H3 H N N 7 AIB N N N N 8 AIB CA C N N 9 AIB C C N N 10 AIB O O N N 11 AIB OXT O N N 12 AIB CB1 C N N 13 AIB CB2 C N N 14 AIB H H N N 15 AIB H2 H N N 16 AIB HXT H N N 17 AIB HB11 H N N 18 AIB HB12 H N N 19 AIB HB13 H N N 20 AIB HB21 H N N 21 AIB HB22 H N N 22 AIB HB23 H N N 23 DIV N N N N 24 DIV CA C N R 25 DIV CB1 C N N 26 DIV CG1 C N N 27 DIV CB2 C N N 28 DIV C C N N 29 DIV O O N N 30 DIV OXT O N N 31 DIV H H N N 32 DIV H2 H N N 33 DIV HB11 H N N 34 DIV HB12 H N N 35 DIV HG11 H N N 36 DIV HG12 H N N 37 DIV HG13 H N N 38 DIV HB21 H N N 39 DIV HB22 H N N 40 DIV HB23 H N N 41 DIV HXT H N N 42 GLN N N N N 43 GLN CA C N S 44 GLN C C N N 45 GLN O O N N 46 GLN CB C N N 47 GLN CG C N N 48 GLN CD C N N 49 GLN OE1 O N N 50 GLN NE2 N N N 51 GLN OXT O N N 52 GLN H H N N 53 GLN H2 H N N 54 GLN HA H N N 55 GLN HB2 H N N 56 GLN HB3 H N N 57 GLN HG2 H N N 58 GLN HG3 H N N 59 GLN HE21 H N N 60 GLN HE22 H N N 61 GLN HXT H N N 62 GLY N N N N 63 GLY CA C N N 64 GLY C C N N 65 GLY O O N N 66 GLY OXT O N N 67 GLY H H N N 68 GLY H2 H N N 69 GLY HA2 H N N 70 GLY HA3 H N N 71 GLY HXT H N N 72 HYP N N N N 73 HYP CA C N S 74 HYP C C N N 75 HYP O O N N 76 HYP CB C N N 77 HYP CG C N R 78 HYP CD C N N 79 HYP OD1 O N N 80 HYP OXT O N N 81 HYP H H N N 82 HYP HA H N N 83 HYP HB2 H N N 84 HYP HB3 H N N 85 HYP HG H N N 86 HYP HD22 H N N 87 HYP HD23 H N N 88 HYP HD1 H N N 89 HYP HXT H N N 90 LEU N N N N 91 LEU CA C N S 92 LEU C C N N 93 LEU O O N N 94 LEU CB C N N 95 LEU CG C N N 96 LEU CD1 C N N 97 LEU CD2 C N N 98 LEU OXT O N N 99 LEU H H N N 100 LEU H2 H N N 101 LEU HA H N N 102 LEU HB2 H N N 103 LEU HB3 H N N 104 LEU HG H N N 105 LEU HD11 H N N 106 LEU HD12 H N N 107 LEU HD13 H N N 108 LEU HD21 H N N 109 LEU HD22 H N N 110 LEU HD23 H N N 111 LEU HXT H N N 112 PHE N N N N 113 PHE CA C N S 114 PHE C C N N 115 PHE O O N N 116 PHE CB C N N 117 PHE CG C Y N 118 PHE CD1 C Y N 119 PHE CD2 C Y N 120 PHE CE1 C Y N 121 PHE CE2 C Y N 122 PHE CZ C Y N 123 PHE OXT O N N 124 PHE H H N N 125 PHE H2 H N N 126 PHE HA H N N 127 PHE HB2 H N N 128 PHE HB3 H N N 129 PHE HD1 H N N 130 PHE HD2 H N N 131 PHE HE1 H N N 132 PHE HE2 H N N 133 PHE HZ H N N 134 PHE HXT H N N 135 PHL N N N N 136 PHL CA C N S 137 PHL C C N N 138 PHL O O N N 139 PHL CB C N N 140 PHL CG C Y N 141 PHL CD1 C Y N 142 PHL CD2 C Y N 143 PHL CE1 C Y N 144 PHL CE2 C Y N 145 PHL CZ C Y N 146 PHL H H N N 147 PHL H2 H N N 148 PHL HA H N N 149 PHL HC1 H N N 150 PHL HC2 H N N 151 PHL HO H N N 152 PHL HB2 H N N 153 PHL HB3 H N N 154 PHL HD1 H N N 155 PHL HD2 H N N 156 PHL HE1 H N N 157 PHL HE2 H N N 158 PHL HZ H N N 159 PRO N N N N 160 PRO CA C N S 161 PRO C C N N 162 PRO O O N N 163 PRO CB C N N 164 PRO CG C N N 165 PRO CD C N N 166 PRO OXT O N N 167 PRO H H N N 168 PRO HA H N N 169 PRO HB2 H N N 170 PRO HB3 H N N 171 PRO HG2 H N N 172 PRO HG3 H N N 173 PRO HD2 H N N 174 PRO HD3 H N N 175 PRO HXT H N N 176 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACE C O doub N N 1 ACE C CH3 sing N N 2 ACE C H sing N N 3 ACE CH3 H1 sing N N 4 ACE CH3 H2 sing N N 5 ACE CH3 H3 sing N N 6 AIB N CA sing N N 7 AIB N H sing N N 8 AIB N H2 sing N N 9 AIB CA C sing N N 10 AIB CA CB1 sing N N 11 AIB CA CB2 sing N N 12 AIB C O doub N N 13 AIB C OXT sing N N 14 AIB OXT HXT sing N N 15 AIB CB1 HB11 sing N N 16 AIB CB1 HB12 sing N N 17 AIB CB1 HB13 sing N N 18 AIB CB2 HB21 sing N N 19 AIB CB2 HB22 sing N N 20 AIB CB2 HB23 sing N N 21 DIV N CA sing N N 22 DIV N H sing N N 23 DIV N H2 sing N N 24 DIV CA CB1 sing N N 25 DIV CA CB2 sing N N 26 DIV CA C sing N N 27 DIV CB1 CG1 sing N N 28 DIV CB1 HB11 sing N N 29 DIV CB1 HB12 sing N N 30 DIV CG1 HG11 sing N N 31 DIV CG1 HG12 sing N N 32 DIV CG1 HG13 sing N N 33 DIV CB2 HB21 sing N N 34 DIV CB2 HB22 sing N N 35 DIV CB2 HB23 sing N N 36 DIV C O doub N N 37 DIV C OXT sing N N 38 DIV OXT HXT sing N N 39 GLN N CA sing N N 40 GLN N H sing N N 41 GLN N H2 sing N N 42 GLN CA C sing N N 43 GLN CA CB sing N N 44 GLN CA HA sing N N 45 GLN C O doub N N 46 GLN C OXT sing N N 47 GLN CB CG sing N N 48 GLN CB HB2 sing N N 49 GLN CB HB3 sing N N 50 GLN CG CD sing N N 51 GLN CG HG2 sing N N 52 GLN CG HG3 sing N N 53 GLN CD OE1 doub N N 54 GLN CD NE2 sing N N 55 GLN NE2 HE21 sing N N 56 GLN NE2 HE22 sing N N 57 GLN OXT HXT sing N N 58 GLY N CA sing N N 59 GLY N H sing N N 60 GLY N H2 sing N N 61 GLY CA C sing N N 62 GLY CA HA2 sing N N 63 GLY CA HA3 sing N N 64 GLY C O doub N N 65 GLY C OXT sing N N 66 GLY OXT HXT sing N N 67 HYP N CA sing N N 68 HYP N CD sing N N 69 HYP N H sing N N 70 HYP CA C sing N N 71 HYP CA CB sing N N 72 HYP CA HA sing N N 73 HYP C O doub N N 74 HYP C OXT sing N N 75 HYP CB CG sing N N 76 HYP CB HB2 sing N N 77 HYP CB HB3 sing N N 78 HYP CG CD sing N N 79 HYP CG OD1 sing N N 80 HYP CG HG sing N N 81 HYP CD HD22 sing N N 82 HYP CD HD23 sing N N 83 HYP OD1 HD1 sing N N 84 HYP OXT HXT sing N N 85 LEU N CA sing N N 86 LEU N H sing N N 87 LEU N H2 sing N N 88 LEU CA C sing N N 89 LEU CA CB sing N N 90 LEU CA HA sing N N 91 LEU C O doub N N 92 LEU C OXT sing N N 93 LEU CB CG sing N N 94 LEU CB HB2 sing N N 95 LEU CB HB3 sing N N 96 LEU CG CD1 sing N N 97 LEU CG CD2 sing N N 98 LEU CG HG sing N N 99 LEU CD1 HD11 sing N N 100 LEU CD1 HD12 sing N N 101 LEU CD1 HD13 sing N N 102 LEU CD2 HD21 sing N N 103 LEU CD2 HD22 sing N N 104 LEU CD2 HD23 sing N N 105 LEU OXT HXT sing N N 106 PHE N CA sing N N 107 PHE N H sing N N 108 PHE N H2 sing N N 109 PHE CA C sing N N 110 PHE CA CB sing N N 111 PHE CA HA sing N N 112 PHE C O doub N N 113 PHE C OXT sing N N 114 PHE CB CG sing N N 115 PHE CB HB2 sing N N 116 PHE CB HB3 sing N N 117 PHE CG CD1 doub Y N 118 PHE CG CD2 sing Y N 119 PHE CD1 CE1 sing Y N 120 PHE CD1 HD1 sing N N 121 PHE CD2 CE2 doub Y N 122 PHE CD2 HD2 sing N N 123 PHE CE1 CZ doub Y N 124 PHE CE1 HE1 sing N N 125 PHE CE2 CZ sing Y N 126 PHE CE2 HE2 sing N N 127 PHE CZ HZ sing N N 128 PHE OXT HXT sing N N 129 PHL N CA sing N N 130 PHL N H sing N N 131 PHL N H2 sing N N 132 PHL CA C sing N N 133 PHL CA CB sing N N 134 PHL CA HA sing N N 135 PHL C O sing N N 136 PHL C HC1 sing N N 137 PHL C HC2 sing N N 138 PHL O HO sing N N 139 PHL CB CG sing N N 140 PHL CB HB2 sing N N 141 PHL CB HB3 sing N N 142 PHL CG CD1 doub Y N 143 PHL CG CD2 sing Y N 144 PHL CD1 CE1 sing Y N 145 PHL CD1 HD1 sing N N 146 PHL CD2 CE2 doub Y N 147 PHL CD2 HD2 sing N N 148 PHL CE1 CZ doub Y N 149 PHL CE1 HE1 sing N N 150 PHL CE2 CZ sing Y N 151 PHL CE2 HE2 sing N N 152 PHL CZ HZ sing N N 153 PRO N CA sing N N 154 PRO N CD sing N N 155 PRO N H sing N N 156 PRO CA C sing N N 157 PRO CA CB sing N N 158 PRO CA HA sing N N 159 PRO C O doub N N 160 PRO C OXT sing N N 161 PRO CB CG sing N N 162 PRO CB HB2 sing N N 163 PRO CB HB3 sing N N 164 PRO CG CD sing N N 165 PRO CG HG2 sing N N 166 PRO CG HG3 sing N N 167 PRO CD HD2 sing N N 168 PRO CD HD3 sing N N 169 PRO OXT HXT sing N N 170 # _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Bruker Avance' # _atom_sites.entry_id 2M1F _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_ #