HEADER TRANSCRIPTION 03-DEC-12 2M1M TITLE SOLUTION STRUCTURE OF THE PSIAA4 OLIGOMERIZATION DOMAIN REVEALS TITLE 2 INTERACTION MODES FOR TRANSCRIPTION FACTORS IN EARLY AUXIN RESPONSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: AUXIN-INDUCED PROTEIN IAA4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 86-189; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PISUM SATIVUM; SOURCE 3 ORGANISM_COMMON: GARDEN PEA,PEAS; SOURCE 4 ORGANISM_TAXID: 3888; SOURCE 5 GENE: IAA4/5; SOURCE 6 EXPRESSION_SYSTEM: PISUM SATIVUM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 3888; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: M15; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PQE-16; SOURCE 10 OTHER_DETAILS: THE QIAEXPRESSIONIST (QIAGEN) KIT KEYWDS BETA-GRASP (UBIQUITIN-LIKE), TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR M.KOVERMANN,D.C.DINESH,M.GOPALSWAMY,S.ABEL,J.BALBACH REVDAT 4 01-MAY-24 2M1M 1 REMARK SEQADV REVDAT 3 27-MAY-15 2M1M 1 JRNL REVDAT 2 06-MAY-15 2M1M 1 JRNL REVDAT 1 11-DEC-13 2M1M 0 JRNL AUTH D.C.DINESH,M.KOVERMANN,M.GOPALSWAMY,A.HELLMUTH, JRNL AUTH 2 L.I.CALDERON VILLALOBOS,H.LILIE,J.BALBACH,S.ABEL JRNL TITL SOLUTION STRUCTURE OF THE PSIAA4 OLIGOMERIZATION DOMAIN JRNL TITL 2 REVEALS INTERACTION MODES FOR TRANSCRIPTION FACTORS IN EARLY JRNL TITL 3 AUXIN RESPONSE. JRNL REF PROC.NATL.ACAD.SCI.USA V. 112 6230 2015 JRNL REFN ISSN 0027-8424 JRNL PMID 25918389 JRNL DOI 10.1073/PNAS.1424077112 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TOPSPIN 2.3, ARIA REMARK 3 AUTHORS : BRUKER BIOSPIN (TOPSPIN), LINGE, O'DONOGHUE AND REMARK 3 NILGES (ARIA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2M1M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-DEC-12. REMARK 100 THE DEPOSITION ID IS D_1000103094. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 2.5 REMARK 210 IONIC STRENGTH : 0.112 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM [U-98% 13C; U-98% 15N] REMARK 210 PSIAA4, 50 MM SODIUM PHOSPHATE, REMARK 210 100 MM SODIUM CHLORIDE, 2 MM REMARK 210 MAGNESIUM CHLORIDE, 1 MM DTT, 90% REMARK 210 H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 3D HNCA; 3D HNCACB; 3D REMARK 210 HN(COCA)CB; 3D 1H-15N NOESY; 3D REMARK 210 1H-13C NOESY ALIPHATIC; 3D 1H- REMARK 210 13C NOESY AROMATIC; 2D 1H-1H REMARK 210 NOESY; 3D HNCO; 3D HCCH-TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, NMRVIEW, ARIA REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 300 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 66 HZ2 LYS A 67 1.58 REMARK 500 HG1 THR A 63 O ARG A 90 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 58 -82.72 65.90 REMARK 500 1 CYS A 102 105.20 -55.21 REMARK 500 1 VAL A 104 92.19 59.98 REMARK 500 2 ASP A 4 108.71 63.28 REMARK 500 2 SER A 58 -79.33 69.26 REMARK 500 3 ASP A 4 155.30 68.27 REMARK 500 3 TYR A 49 89.73 -65.95 REMARK 500 3 SER A 58 -86.19 69.27 REMARK 500 4 ALA A 3 -51.51 175.94 REMARK 500 4 SER A 58 -80.84 71.77 REMARK 500 4 VAL A 104 73.84 34.73 REMARK 500 5 ALA A 3 -8.26 71.95 REMARK 500 5 ASP A 4 34.41 -96.13 REMARK 500 5 VAL A 5 118.37 74.63 REMARK 500 5 SER A 58 -83.87 63.83 REMARK 500 5 CYS A 102 91.18 57.78 REMARK 500 6 ALA A 3 -174.77 64.49 REMARK 500 6 SER A 58 -86.99 67.86 REMARK 500 6 CYS A 102 97.46 -57.71 REMARK 500 6 VAL A 104 61.27 32.70 REMARK 500 7 ALA A 3 77.62 61.61 REMARK 500 7 GLU A 48 83.02 45.37 REMARK 500 7 TYR A 49 86.40 -66.40 REMARK 500 7 SER A 58 -82.90 63.77 REMARK 500 8 VAL A 5 86.64 61.79 REMARK 500 8 SER A 50 107.82 -57.79 REMARK 500 8 SER A 58 -138.75 150.09 REMARK 500 9 ALA A 3 142.99 77.92 REMARK 500 9 VAL A 5 167.75 67.61 REMARK 500 9 TYR A 49 93.03 -63.89 REMARK 500 9 SER A 58 -89.75 146.91 REMARK 500 10 SER A 13 112.41 -160.03 REMARK 500 10 SER A 58 -72.44 69.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18870 RELATED DB: BMRB DBREF 2M1M A 1 104 UNP P49679 IAA4_PEA 86 189 SEQADV 2M1M GLY A 105 UNP P49679 EXPRESSION TAG SEQADV 2M1M SER A 106 UNP P49679 EXPRESSION TAG SEQADV 2M1M HIS A 107 UNP P49679 EXPRESSION TAG SEQRES 1 A 107 HIS GLU ALA ASP VAL GLY GLY ILE PHE VAL LYS VAL SER SEQRES 2 A 107 MET ASP GLY ALA PRO TYR LEU ARG LYS ILE ASP LEU ARG SEQRES 3 A 107 VAL TYR GLY GLY TYR SER GLU LEU LEU LYS ALA LEU GLU SEQRES 4 A 107 THR MET PHE LYS LEU THR ILE GLY GLU TYR SER GLU ARG SEQRES 5 A 107 GLU GLY TYR LYS GLY SER GLU TYR ALA PRO THR TYR GLU SEQRES 6 A 107 ASP LYS ASP GLY ASP TRP MET LEU VAL GLY ASP VAL PRO SEQRES 7 A 107 TRP ASP MET PHE VAL THR SER CYS LYS ARG LEU ARG ILE SEQRES 8 A 107 MET LYS GLY THR GLU ALA LYS GLY LEU GLY CYS GLY VAL SEQRES 9 A 107 GLY SER HIS HELIX 1 1 ARG A 26 GLY A 29 5 4 HELIX 2 2 GLY A 30 PHE A 42 1 13 HELIX 3 3 PRO A 78 CYS A 86 1 9 HELIX 4 4 GLY A 94 LYS A 98 1 5 SHEET 1 A 5 LEU A 20 ASP A 24 0 SHEET 2 A 5 PHE A 9 SER A 13 -1 N VAL A 10 O ILE A 23 SHEET 3 A 5 LEU A 89 LYS A 93 1 O LEU A 89 N LYS A 11 SHEET 4 A 5 TYR A 60 GLU A 65 -1 N THR A 63 O ARG A 90 SHEET 5 A 5 TRP A 71 LEU A 73 -1 O MET A 72 N TYR A 64 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1