data_2M1Z # _entry.id 2M1Z # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2M1Z pdb_00002m1z 10.2210/pdb2m1z/pdb RCSB RCSB103107 ? ? BMRB 18887 ? ? WWPDB D_1000103107 ? ? # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.content_type _pdbx_database_related.details 18887 BMRB unspecified . CSGID-IDP05665 TargetTrack unspecified . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2M1Z _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-12-10 _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhang, Y.' 1 'Winsor, J.' 2 'Radhakrishnan, I.' 3 'Anderson, W.' 4 'Center for Structural Genomics of Infectious Diseases (CSGID)' 5 # _citation.id primary _citation.title 'Solution structure of hypothetical protein lmo0427' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhang, Y.' 1 ? primary 'Winsor, J.' 2 ? primary 'Radhakrishnan, I.' 3 ? primary 'Anderson, W.' 4 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Lmo0427 protein' _entity.formula_weight 11395.378 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MKRKIIAVTACATGVAHTYMAAQALKKGAKKMGNLIKVETQGATGIENELTEKDVNIGEVVIFAVDTKVRNKERFDGKVV LEVPVSAPIKDAEKVINAALALIDEK ; _entity_poly.pdbx_seq_one_letter_code_can ;MKRKIIAVTACATGVAHTYMAAQALKKGAKKMGNLIKVETQGATGIENELTEKDVNIGEVVIFAVDTKVRNKERFDGKVV LEVPVSAPIKDAEKVINAALALIDEK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 'CSGID-IDP05665 ' # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 ARG n 1 4 LYS n 1 5 ILE n 1 6 ILE n 1 7 ALA n 1 8 VAL n 1 9 THR n 1 10 ALA n 1 11 CYS n 1 12 ALA n 1 13 THR n 1 14 GLY n 1 15 VAL n 1 16 ALA n 1 17 HIS n 1 18 THR n 1 19 TYR n 1 20 MET n 1 21 ALA n 1 22 ALA n 1 23 GLN n 1 24 ALA n 1 25 LEU n 1 26 LYS n 1 27 LYS n 1 28 GLY n 1 29 ALA n 1 30 LYS n 1 31 LYS n 1 32 MET n 1 33 GLY n 1 34 ASN n 1 35 LEU n 1 36 ILE n 1 37 LYS n 1 38 VAL n 1 39 GLU n 1 40 THR n 1 41 GLN n 1 42 GLY n 1 43 ALA n 1 44 THR n 1 45 GLY n 1 46 ILE n 1 47 GLU n 1 48 ASN n 1 49 GLU n 1 50 LEU n 1 51 THR n 1 52 GLU n 1 53 LYS n 1 54 ASP n 1 55 VAL n 1 56 ASN n 1 57 ILE n 1 58 GLY n 1 59 GLU n 1 60 VAL n 1 61 VAL n 1 62 ILE n 1 63 PHE n 1 64 ALA n 1 65 VAL n 1 66 ASP n 1 67 THR n 1 68 LYS n 1 69 VAL n 1 70 ARG n 1 71 ASN n 1 72 LYS n 1 73 GLU n 1 74 ARG n 1 75 PHE n 1 76 ASP n 1 77 GLY n 1 78 LYS n 1 79 VAL n 1 80 VAL n 1 81 LEU n 1 82 GLU n 1 83 VAL n 1 84 PRO n 1 85 VAL n 1 86 SER n 1 87 ALA n 1 88 PRO n 1 89 ILE n 1 90 LYS n 1 91 ASP n 1 92 ALA n 1 93 GLU n 1 94 LYS n 1 95 VAL n 1 96 ILE n 1 97 ASN n 1 98 ALA n 1 99 ALA n 1 100 LEU n 1 101 ALA n 1 102 LEU n 1 103 ILE n 1 104 ASP n 1 105 GLU n 1 106 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene lmo0427 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC BAA-679 / EGD-e' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Listeria monocytogenes EGD-e' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 169963 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pBR322 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8Y9U3_LISMO _struct_ref.pdbx_db_accession Q8Y9U3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKRKIIAVTACATGVAHTYMAAQALKKGAKKMGNLIKVETQGATGIENELTEKDVNIGEVVIFAVDTKVRNKERFDGKVV LEVPVSAPIKDAEKVINAALALIDEK ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2M1Z _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 106 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8Y9U3 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 106 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 106 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '3D CBCA(CO)NH' 1 3 1 '3D HNCACB' 1 4 1 '3D HNCO' 1 5 2 '3D HCCH-TOCSY' 1 6 2 '3D HCCH-COSY' 1 7 1 '3D 1H-15N NOESY' 1 8 2 '3D 1H-13C NOESY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.2 _pdbx_nmr_exptl_sample_conditions.pH 6.7 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '1.2 mM [U-95% 13C; U-95% 15N] Listeria monocytogenes EGD-e, 20 mM potassium phosphate, 100 mM sodium chloride, 90% H2O/10% D2O' 1 '90% H2O/10% D2O' '1.2 mM [U-95% 13C; U-95% 15N] Listeria monocytogenes EGD-e, 20 mM potassium phosphate, 100 mM sodium chloride, 100% D2O' 2 '100% D2O' # _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Varian INOVA' # _pdbx_nmr_refine.entry_id 2M1Z _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 80 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2M1Z _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2M1Z _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal ;Linge, O'Donoghue and Nilges ; 'structure solution' ARIA 1.2 1 ;Linge, O'Donoghue and Nilges ; refinement ARIA 1.2 2 'Delaglio, Zhengrong and Bax' processing NMRPipe ? 3 Goddard 'peak picking' Sparky ? 4 Goddard 'chemical shift assignment' Sparky ? 5 Goddard 'data analysis' Sparky ? 6 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2M1Z _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2M1Z _struct.title 'Solution structure of uncharacterized protein lmo0427' _struct.pdbx_model_details 'lowest energy, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2M1Z _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'homolog PTS system IIB component, TRANSFERASE, Structural Genomics, Center for Structural Genomics of Infectious Diseases, CSGID' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 14 ? GLY A 33 ? GLY A 14 GLY A 33 1 ? 20 HELX_P HELX_P2 2 THR A 51 ? GLY A 58 ? THR A 51 GLY A 58 1 ? 8 HELX_P HELX_P3 3 ASN A 71 ? ASP A 76 ? ASN A 71 ASP A 76 1 ? 6 HELX_P HELX_P4 4 SER A 86 ? ASP A 91 ? SER A 86 ASP A 91 1 ? 6 HELX_P HELX_P5 5 ASP A 91 ? ASP A 104 ? ASP A 91 ASP A 104 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 35 ? GLN A 41 ? LEU A 35 GLN A 41 A 2 LYS A 4 ? ALA A 10 ? LYS A 4 ALA A 10 A 3 VAL A 60 ? VAL A 65 ? VAL A 60 VAL A 65 A 4 VAL A 79 ? VAL A 83 ? VAL A 79 VAL A 83 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLU A 39 ? O GLU A 39 N THR A 9 ? N THR A 9 A 2 3 N ILE A 6 ? N ILE A 6 O VAL A 60 ? O VAL A 60 A 3 4 N PHE A 63 ? N PHE A 63 O VAL A 83 ? O VAL A 83 # _atom_sites.entry_id 2M1Z _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 ARG 3 3 3 ARG ARG A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 ALA 7 7 7 ALA ALA A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 CYS 11 11 11 CYS CYS A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 HIS 17 17 17 HIS HIS A . n A 1 18 THR 18 18 18 THR THR A . n A 1 19 TYR 19 19 19 TYR TYR A . n A 1 20 MET 20 20 20 MET MET A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 GLN 23 23 23 GLN GLN A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 MET 32 32 32 MET MET A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 ASN 34 34 34 ASN ASN A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 THR 40 40 40 THR THR A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 ASN 48 48 48 ASN ASN A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 THR 51 51 51 THR THR A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 LYS 53 53 53 LYS LYS A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 VAL 55 55 55 VAL VAL A . n A 1 56 ASN 56 56 56 ASN ASN A . n A 1 57 ILE 57 57 57 ILE ILE A . n A 1 58 GLY 58 58 58 GLY GLY A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 VAL 61 61 61 VAL VAL A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 PHE 63 63 63 PHE PHE A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 ASN 71 71 71 ASN ASN A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 GLU 73 73 73 GLU GLU A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 PHE 75 75 75 PHE PHE A . n A 1 76 ASP 76 76 76 ASP ASP A . n A 1 77 GLY 77 77 77 GLY GLY A . n A 1 78 LYS 78 78 78 LYS LYS A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 PRO 84 84 84 PRO PRO A . n A 1 85 VAL 85 85 85 VAL VAL A . n A 1 86 SER 86 86 86 SER SER A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 PRO 88 88 88 PRO PRO A . n A 1 89 ILE 89 89 89 ILE ILE A . n A 1 90 LYS 90 90 90 LYS LYS A . n A 1 91 ASP 91 91 91 ASP ASP A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 LYS 94 94 94 LYS LYS A . n A 1 95 VAL 95 95 95 VAL VAL A . n A 1 96 ILE 96 96 96 ILE ILE A . n A 1 97 ASN 97 97 97 ASN ASN A . n A 1 98 ALA 98 98 98 ALA ALA A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 ALA 101 101 101 ALA ALA A . n A 1 102 LEU 102 102 102 LEU LEU A . n A 1 103 ILE 103 103 103 ILE ILE A . n A 1 104 ASP 104 104 104 ASP ASP A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 LYS 106 106 106 LYS LYS A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Center for Structural Genomics of Infectious Diseases' _pdbx_SG_project.initial_of_center CSGID # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-12-26 2 'Structure model' 1 1 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' database_2 2 2 'Structure model' pdbx_database_status 3 2 'Structure model' pdbx_nmr_software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 2 'Structure model' '_pdbx_nmr_software.name' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'Listeria monocytogenes EGD-e-1' 1.2 ? mM '[U-95% 13C; U-95% 15N]' 1 'potassium phosphate-2' 20 ? mM ? 1 'sodium chloride-3' 100 ? mM ? 1 'Listeria monocytogenes EGD-e-4' 1.2 ? mM '[U-95% 13C; U-95% 15N]' 2 'potassium phosphate-5' 20 ? mM ? 2 'sodium chloride-6' 100 ? mM ? 2 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 2 HG A CYS 11 ? ? OD2 A ASP 66 ? ? 1.54 2 5 O A ALA 43 ? ? HG1 A THR 44 ? ? 1.57 3 6 HA A CYS 11 ? ? HB3 A ASP 66 ? ? 1.31 4 7 HG11 A VAL 55 ? ? HB3 A ARG 74 ? ? 1.24 5 8 HZ3 A LYS 31 ? ? OE2 A GLU 93 ? ? 1.59 6 8 HZ1 A LYS 4 ? ? OD1 A ASP 54 ? ? 1.59 7 9 HG A CYS 11 ? ? OG1 A THR 18 ? ? 1.59 8 10 HA A CYS 11 ? ? HB3 A ASP 66 ? ? 1.30 9 11 HG23 A VAL 55 ? ? HD2 A ARG 74 ? ? 1.24 10 13 HB A VAL 69 ? ? HG3 A LYS 72 ? ? 1.29 11 14 HB A THR 40 ? ? HB3 A GLU 47 ? ? 1.27 12 14 HE A ARG 3 ? ? HG3 A GLU 59 ? ? 1.27 13 15 HZ3 A LYS 90 ? ? OD1 A ASP 91 ? ? 1.57 14 15 HZ1 A LYS 37 ? ? OD1 A ASP 54 ? ? 1.60 15 16 HA A ALA 101 ? ? HA A GLU 105 ? ? 1.32 16 17 OD2 A ASP 104 ? ? HZ2 A LYS 106 ? ? 1.58 17 20 HA A CYS 11 ? ? HB3 A ASP 66 ? ? 1.29 18 20 HD2 A ARG 3 ? ? HG3 A GLU 59 ? ? 1.32 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 12 ? ? -92.14 -75.14 2 1 ALA A 43 ? ? 75.50 -73.26 3 1 ASP A 104 ? ? -135.92 -54.61 4 1 GLU A 105 ? ? 68.72 101.97 5 2 GLU A 47 ? ? -90.94 -63.48 6 2 GLU A 49 ? ? 63.38 87.97 7 3 LYS A 2 ? ? -40.63 97.52 8 3 ALA A 43 ? ? -143.37 -49.06 9 3 THR A 67 ? ? -113.72 -166.00 10 3 ASP A 91 ? ? -104.87 41.86 11 3 ASP A 104 ? ? -137.31 -41.20 12 3 GLU A 105 ? ? 63.95 70.65 13 4 ALA A 43 ? ? -169.24 -128.01 14 4 GLU A 47 ? ? -104.03 -62.22 15 4 GLU A 49 ? ? 69.90 107.01 16 4 THR A 67 ? ? -106.61 -168.68 17 4 ASP A 91 ? ? -94.71 42.62 18 4 ASP A 104 ? ? -149.90 -59.42 19 4 GLU A 105 ? ? 70.49 95.28 20 5 LYS A 2 ? ? 64.22 97.48 21 5 THR A 44 ? ? 59.59 -5.70 22 5 ASN A 48 ? ? 63.90 71.33 23 5 ASP A 66 ? ? -153.62 -34.70 24 5 ASP A 91 ? ? -90.86 39.73 25 6 ALA A 43 ? ? 65.20 83.67 26 6 THR A 44 ? ? 76.18 -33.91 27 6 GLU A 59 ? ? -83.68 -72.11 28 7 ALA A 43 ? ? 73.95 -42.12 29 7 THR A 44 ? ? -149.85 -21.01 30 7 GLU A 49 ? ? 64.75 83.93 31 7 LYS A 78 ? ? -121.33 -154.68 32 8 ALA A 43 ? ? 70.82 -77.09 33 8 ASN A 48 ? ? 76.18 -62.21 34 8 GLU A 49 ? ? 66.60 110.42 35 8 GLU A 59 ? ? -81.43 -72.50 36 8 ASP A 91 ? ? -95.66 36.35 37 8 GLU A 105 ? ? 66.91 87.82 38 9 LYS A 2 ? ? 52.10 78.04 39 9 ALA A 43 ? ? -143.29 -39.42 40 9 THR A 44 ? ? -148.95 -18.64 41 10 THR A 13 ? ? -100.07 -87.08 42 10 GLU A 49 ? ? 71.74 123.12 43 10 THR A 67 ? ? -171.90 -165.04 44 10 PHE A 75 ? ? -92.67 46.46 45 10 ASP A 76 ? ? -61.07 -80.77 46 10 ASP A 91 ? ? -105.19 41.96 47 10 GLU A 105 ? ? 62.56 85.13 48 11 THR A 67 ? ? -125.20 -169.98 49 11 ASP A 104 ? ? -145.88 -78.97 50 11 GLU A 105 ? ? 173.01 -45.98 51 12 GLN A 41 ? ? -104.61 -156.53 52 12 THR A 44 ? ? 73.48 -39.16 53 12 PRO A 88 ? ? -68.54 0.48 54 12 LYS A 90 ? ? -97.74 -64.90 55 12 ASP A 91 ? ? -105.72 42.27 56 13 ALA A 10 ? ? -164.22 99.94 57 13 ALA A 12 ? ? 64.20 -75.92 58 13 THR A 44 ? ? 71.12 -10.45 59 13 ASN A 48 ? ? -161.15 -68.28 60 13 GLU A 49 ? ? 61.35 97.84 61 13 GLU A 59 ? ? -98.33 -66.99 62 13 THR A 67 ? ? -121.77 -166.33 63 13 ASP A 104 ? ? 61.28 94.87 64 14 ALA A 43 ? ? 70.84 -52.36 65 14 GLU A 59 ? ? -79.85 -70.55 66 14 LYS A 78 ? ? -119.66 -164.58 67 15 ALA A 43 ? ? -106.63 79.18 68 15 THR A 44 ? ? 71.15 -37.57 69 15 GLU A 47 ? ? -85.58 -71.49 70 15 GLU A 59 ? ? -73.80 -70.50 71 15 THR A 67 ? ? -128.22 -168.79 72 15 ASP A 91 ? ? -88.04 38.74 73 15 ASP A 104 ? ? -140.65 -49.50 74 15 GLU A 105 ? ? 77.14 -1.59 75 16 THR A 13 ? ? -91.63 -61.81 76 16 ALA A 43 ? ? 62.63 85.41 77 16 THR A 44 ? ? 75.79 -36.15 78 16 GLU A 49 ? ? 66.55 99.32 79 16 LYS A 78 ? ? -139.03 -158.37 80 16 PRO A 88 ? ? -69.01 3.68 81 16 ASP A 91 ? ? -93.46 37.37 82 16 GLU A 105 ? ? 63.15 72.27 83 17 CYS A 11 ? ? -176.22 -34.06 84 17 ALA A 12 ? ? 70.15 -69.16 85 17 ALA A 43 ? ? 179.38 -46.88 86 17 ASN A 48 ? ? 72.93 -57.62 87 17 GLU A 49 ? ? 64.07 103.13 88 17 LYS A 78 ? ? -121.97 -105.65 89 17 PRO A 88 ? ? -68.75 1.23 90 17 ASP A 91 ? ? -103.37 40.64 91 17 GLU A 105 ? ? 57.78 71.77 92 18 ALA A 12 ? ? 56.28 -89.23 93 18 ALA A 43 ? ? -125.03 -58.16 94 18 GLU A 49 ? ? 67.84 86.54 95 18 GLU A 105 ? ? 59.86 82.91 96 19 ALA A 43 ? ? 59.54 88.65 97 19 THR A 44 ? ? 77.06 -39.78 98 19 ASN A 48 ? ? -108.95 -60.58 99 19 GLU A 49 ? ? 76.05 111.46 100 19 GLU A 105 ? ? 65.76 89.65 101 20 THR A 13 ? ? -105.47 -72.50 102 20 ASP A 66 ? ? -157.71 -34.89 103 20 ASP A 91 ? ? -98.21 33.41 104 20 ASP A 104 ? ? -153.35 -79.26 105 20 GLU A 105 ? ? 176.35 -44.95 #