HEADER TRANSCRIPTION REGULATOR 18-DEC-12 2M2E TITLE SOLUTION NMR STRUCTURE OF THE SANT DOMAIN OF HUMAN DNAJC2, NORTHEAST TITLE 2 STRUCTURAL GENOMICS CONSORTIUM TARGET HR8254A COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNAJ HOMOLOG SUBFAMILY C MEMBER 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SANT 2 DOMAIN RESIDUES 551-621; COMPND 5 SYNONYM: M-PHASE PHOSPHOPROTEIN 11, ZUOTIN-RELATED FACTOR 1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DNAJC2, MPHOSPH11, MPP11, ZRF1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET28-MHL KEYWDS TRANSCRIPTION REGULATOR, DNA-BINDING, NESG, NORTHEAST STRUCTURAL KEYWDS 2 GENOMICS CONSORTIUM, SGC, STRUCTURAL GENOMICS CONSORTIUM, PSI- KEYWDS 3 BIOLOGY EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.LEMAK,A.YEE,S.HOULISTON,M.GARCIA,M.ONG,G.T.MONTELIONE,C.ARROWSMITH, AUTHOR 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG),STRUCTURAL GENOMICS AUTHOR 3 CONSORTIUM (SGC) REVDAT 3 14-JUN-23 2M2E 1 REMARK SEQADV REVDAT 2 30-OCT-13 2M2E 1 REMARK REVDAT 1 20-FEB-13 2M2E 0 JRNL AUTH A.LEMAK,A.YEE,S.HOULISTON,M.GARCIA,M.ONG,C.ARROWSMITH JRNL TITL NMR SOLUTION STRUCTURE OF THE SANT DOMAIN OF HUMAN DNAJC2. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE, CNS REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE), BRUNGER, ADAMS, CLORE, GROS, NILGES AND REMARK 3 READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2M2E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-DEC-12. REMARK 100 THE DEPOSITION ID IS D_1000103122. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 300 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-13C; U-15N] PROTEIN, REMARK 210 10 MM TRIS, 300 MM SODIUM REMARK 210 CHLORIDE, 10 UM ZNSO4, 10 MM DTT, REMARK 210 0.01 % NAN3, 1 MM BENZAMIDINE, REMARK 210 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCO; 3D HNCA; 3D CBCA(CO)NH; REMARK 210 3D HBHA(CO)NH; 3D HCCH-TOCSY; 3D REMARK 210 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 3D 1H-13C NOESY REMARK 210 AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY, FMC, TALOS, PSVS, CYANA REMARK 210 METHOD USED : RESTRAINED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLN A 549 REMARK 465 GLY A 550 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (RES=RESIDUE NAME; REMARK 470 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 470 MODELS 1-20 REMARK 470 RES CSSEQI ATOMS REMARK 470 LYS A 621 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 553 -173.18 -69.78 REMARK 500 1 TRP A 554 90.91 -63.51 REMARK 500 3 TRP A 554 109.59 -56.35 REMARK 500 4 LYS A 620 -79.79 -82.71 REMARK 500 5 PRO A 553 -179.48 -69.08 REMARK 500 5 ALA A 619 44.10 -79.54 REMARK 500 6 TRP A 554 94.80 -66.51 REMARK 500 8 PRO A 553 -157.88 -83.54 REMARK 500 8 LYS A 620 113.73 66.92 REMARK 500 10 ALA A 619 93.51 -69.59 REMARK 500 11 LYS A 620 15.01 -141.74 REMARK 500 12 GLN A 610 -63.62 -91.78 REMARK 500 14 TRP A 554 97.30 -60.99 REMARK 500 15 PRO A 553 -179.50 -69.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 11 ARG A 595 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18909 RELATED DB: BMRB REMARK 900 RELATED ID: NESG-HR8254A RELATED DB: TARGETTRACK DBREF 2M2E A 551 621 UNP Q99543 DNJC2_HUMAN 551 621 SEQADV 2M2E GLN A 549 UNP Q99543 EXPRESSION TAG SEQADV 2M2E GLY A 550 UNP Q99543 EXPRESSION TAG SEQADV 2M2E LYS A 578 UNP Q99543 GLU 578 CONFLICT SEQRES 1 A 73 GLN GLY PHE THR PRO TRP THR THR GLU GLU GLN LYS LEU SEQRES 2 A 73 LEU GLU GLN ALA LEU LYS THR TYR PRO VAL ASN THR PRO SEQRES 3 A 73 GLU ARG TRP LYS LYS ILE ALA GLU ALA VAL PRO GLY ARG SEQRES 4 A 73 THR LYS LYS ASP CYS MET LYS ARG TYR LYS GLU LEU VAL SEQRES 5 A 73 GLU MET VAL LYS ALA LYS LYS ALA ALA GLN GLU GLN VAL SEQRES 6 A 73 LEU ASN ALA SER ARG ALA LYS LYS HELIX 1 1 THR A 555 TYR A 569 1 15 HELIX 2 2 GLU A 575 VAL A 584 1 10 HELIX 3 3 THR A 588 ALA A 619 1 32 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1