HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 21-DEC-12 2M2J TITLE SOLUTION NMR STRUCTURE OF THE N-TERMINAL DOMAIN OF STM1478 FROM TITLE 2 SALMONELLA TYPHIMURIUM LT2: TARGET STR147A OF THE NORTHEAST TITLE 3 STRUCTURAL GENOMICS CONSORTIUM (NESG), AND APC101565 OF THE MIDWEST TITLE 4 CENTER FOR STRUCTURAL GENOMICS (MCSG). COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE PERIPLASMIC PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 21-91; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR SOURCE 3 TYPHIMURIUM; SOURCE 4 ORGANISM_TAXID: 99287; SOURCE 5 STRAIN: LT2; SOURCE 6 GENE: YDGH, STM1478; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: P15TV LIC KEYWDS NESG, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, MCSG, MIDWEST CENTER KEYWDS 2 FOR STRUCTURAL GENOMICS, STRUCTURAL GENOMICS, UNKNOWN FUNCTION, PSI- KEYWDS 3 BIOLOGY EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.HOULISTON,A.YEE,A.LEMAK,M.GARCIA,B.WU,A.SAVCHENKO,G.T.MONTELIONE, AUTHOR 2 C.ARROWSMITH,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG),MIDWEST AUTHOR 3 CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 3 14-JUN-23 2M2J 1 REMARK SEQADV REVDAT 2 30-JUL-14 2M2J 1 JRNL REVDAT 1 08-MAY-13 2M2J 0 JRNL AUTH A.ELETSKY,K.MICHALSKA,S.HOULISTON,Q.ZHANG,M.D.DAILY,X.XU, JRNL AUTH 2 H.CUI,A.YEE,A.LEMAK,B.WU,M.GARCIA,M.C.BURNET,K.M.MEYER, JRNL AUTH 3 U.K.ARYAL,O.SANCHEZ,C.ANSONG,R.XIAO,T.B.ACTON,J.N.ADKINS, JRNL AUTH 4 G.T.MONTELIONE,A.JOACHIMIAK,C.H.ARROWSMITH,A.SAVCHENKO, JRNL AUTH 5 T.SZYPERSKI,J.R.CORT JRNL TITL STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF DUF1471 JRNL TITL 2 DOMAINS OF SALMONELLA PROTEINS SRFN, YDGH/SSSB, AND YAHO. JRNL REF PLOS ONE V. 9 01787 2014 JRNL REFN ESSN 1932-6203 JRNL PMID 25010333 JRNL DOI 10.1371/JOURNAL.PONE.0101787 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE, CNS REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE), BRUNGER, ADAMS, CLORE, GROS, NILGES AND REMARK 3 READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2M2J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1000103127. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 200 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-13C; U-15N] PROTEIN, REMARK 210 10 MM BIS-TRIS, 200 MM SODIUM REMARK 210 CHLORIDE, 10 UM ZNSO4, 10 MM DTT, REMARK 210 1 MM BENZAMIDINE, 90% H2O/10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCO; 3D HNCA; 3D CBCA(CO)NH; REMARK 210 3D HBHA(CO)NH; 3D HCCH-TOCSY; 3D REMARK 210 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 3D 1H-13C NOESY REMARK 210 AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY, FMC, TALOS, PSVS, CYANA REMARK 210 METHOD USED : RESTRAINED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET A 0 REMARK 465 GLY A 1 REMARK 465 SER A 2 REMARK 465 SER A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 SER A 10 REMARK 465 SER A 11 REMARK 465 GLY A 12 REMARK 465 ARG A 13 REMARK 465 GLU A 14 REMARK 465 ASN A 15 REMARK 465 LEU A 16 REMARK 465 TYR A 17 REMARK 465 PHE A 18 REMARK 465 GLN A 19 REMARK 465 GLY A 20 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PHE A 46 79.57 44.07 REMARK 500 1 ASN A 47 -65.30 -122.44 REMARK 500 2 ALA A 22 106.88 173.71 REMARK 500 2 ASN A 78 -77.63 -137.05 REMARK 500 4 PRO A 28 -39.40 -39.59 REMARK 500 4 ASN A 47 -116.55 -156.60 REMARK 500 5 ALA A 22 107.01 64.71 REMARK 500 5 ARG A 45 96.34 -68.50 REMARK 500 6 ALA A 22 136.81 -178.53 REMARK 500 6 ARG A 45 95.69 -63.77 REMARK 500 7 ASN A 78 -72.48 -131.45 REMARK 500 8 PHE A 46 82.78 55.94 REMARK 500 8 TRP A 82 96.82 -66.93 REMARK 500 9 PHE A 46 90.65 60.79 REMARK 500 9 ASN A 78 107.87 -56.83 REMARK 500 10 ALA A 22 96.14 58.71 REMARK 500 11 VAL A 70 96.20 -69.68 REMARK 500 11 PHE A 76 48.49 -84.04 REMARK 500 12 PHE A 46 -3.71 81.75 REMARK 500 12 PHE A 76 57.68 -92.49 REMARK 500 13 PHE A 46 81.65 59.05 REMARK 500 14 ALA A 22 108.62 63.81 REMARK 500 15 ALA A 22 -146.67 -129.23 REMARK 500 16 PHE A 46 76.22 -106.94 REMARK 500 16 ASN A 78 127.01 -173.22 REMARK 500 16 SER A 79 85.78 64.89 REMARK 500 17 PHE A 46 92.28 66.13 REMARK 500 18 ALA A 22 113.89 176.57 REMARK 500 19 ALA A 22 117.53 -162.31 REMARK 500 19 ARG A 45 46.39 -96.98 REMARK 500 19 PHE A 46 -40.20 -177.11 REMARK 500 19 ASN A 78 82.17 60.25 REMARK 500 19 SER A 79 21.01 -168.92 REMARK 500 20 ASN A 78 -19.82 74.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18917 RELATED DB: BMRB REMARK 900 RELATED ID: STR147A RELATED DB: TARGETTRACK REMARK 900 RELATED ID: APC101565 RELATED DB: TARGETTRACK DBREF 2M2J A 21 91 UNP Q8ZPL1 Q8ZPL1_SALTY 21 91 SEQADV 2M2J MET A 0 UNP Q8ZPL1 EXPRESSION TAG SEQADV 2M2J GLY A 1 UNP Q8ZPL1 EXPRESSION TAG SEQADV 2M2J SER A 2 UNP Q8ZPL1 EXPRESSION TAG SEQADV 2M2J SER A 3 UNP Q8ZPL1 EXPRESSION TAG SEQADV 2M2J HIS A 4 UNP Q8ZPL1 EXPRESSION TAG SEQADV 2M2J HIS A 5 UNP Q8ZPL1 EXPRESSION TAG SEQADV 2M2J HIS A 6 UNP Q8ZPL1 EXPRESSION TAG SEQADV 2M2J HIS A 7 UNP Q8ZPL1 EXPRESSION TAG SEQADV 2M2J HIS A 8 UNP Q8ZPL1 EXPRESSION TAG SEQADV 2M2J HIS A 9 UNP Q8ZPL1 EXPRESSION TAG SEQADV 2M2J SER A 10 UNP Q8ZPL1 EXPRESSION TAG SEQADV 2M2J SER A 11 UNP Q8ZPL1 EXPRESSION TAG SEQADV 2M2J GLY A 12 UNP Q8ZPL1 EXPRESSION TAG SEQADV 2M2J ARG A 13 UNP Q8ZPL1 EXPRESSION TAG SEQADV 2M2J GLU A 14 UNP Q8ZPL1 EXPRESSION TAG SEQADV 2M2J ASN A 15 UNP Q8ZPL1 EXPRESSION TAG SEQADV 2M2J LEU A 16 UNP Q8ZPL1 EXPRESSION TAG SEQADV 2M2J TYR A 17 UNP Q8ZPL1 EXPRESSION TAG SEQADV 2M2J PHE A 18 UNP Q8ZPL1 EXPRESSION TAG SEQADV 2M2J GLN A 19 UNP Q8ZPL1 EXPRESSION TAG SEQADV 2M2J GLY A 20 UNP Q8ZPL1 EXPRESSION TAG SEQADV 2M2J GLU A 62 UNP Q8ZPL1 LYS 62 CONFLICT SEQRES 1 A 92 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 92 ARG GLU ASN LEU TYR PHE GLN GLY HIS ALA ALA THR GLU SEQRES 3 A 92 LEU THR PRO GLU GLN ALA ALA ALA LEU LYS PRO TYR ASP SEQRES 4 A 92 ARG ILE VAL ILE THR GLY ARG PHE ASN ALA ILE GLY ASP SEQRES 5 A 92 ALA VAL SER ALA VAL SER ARG ARG ALA ASP GLU GLU GLY SEQRES 6 A 92 ALA ALA SER PHE TYR VAL VAL ASP THR SER GLU PHE GLY SEQRES 7 A 92 ASN SER GLY ASN TRP ARG VAL VAL ALA ASP VAL TYR LYS SEQRES 8 A 92 ALA HELIX 1 1 THR A 27 ALA A 33 1 7 HELIX 2 2 ALA A 48 GLU A 63 1 16 SHEET 1 A 4 THR A 24 GLU A 25 0 SHEET 2 A 4 SER A 67 GLU A 75 1 O PHE A 68 N THR A 24 SHEET 3 A 4 ASN A 81 TYR A 89 -1 O TYR A 89 N SER A 67 SHEET 4 A 4 ASP A 38 ARG A 45 -1 N GLY A 44 O TRP A 82 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1