data_2M2U # _entry.id 2M2U # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2M2U RCSB RCSB103138 BMRB 18934 WWPDB D_1000103138 # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.content_type _pdbx_database_related.details 18934 BMRB unspecified . 2M2T PDB unspecified . 2M2V PDB unspecified . 2M2W PDB unspecified . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2M2U _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-01-03 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wu, W.' 1 'Su, M.' 2 'Tsai, M.' 3 # _citation.id primary _citation.title 'How a low-fidelity DNA polymerase chooses non-Watson-Crick from Watson-Crick incorporation.' _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 136 _citation.page_first 4927 _citation.page_last 4937 _citation.year 2014 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24617852 _citation.pdbx_database_id_DOI 10.1021/ja4102375 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Wu, W.J.' 1 primary 'Su, M.I.' 2 primary 'Wu, J.L.' 3 primary 'Kumar, S.' 4 primary 'Lim, L.H.' 5 primary 'Wang, C.W.' 6 primary 'Nelissen, F.H.' 7 primary 'Chen, M.C.' 8 primary 'Doreleijers, J.F.' 9 primary 'Wijmenga, S.S.' 10 primary 'Tsai, M.D.' 11 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Repair DNA polymerase X' 20351.488 1 2.7.7.7 ? ? ? 2 non-polymer syn "2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE" 507.181 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Pol X' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MLTLIQGKKIVNHLRSRLAFEYNGQLIKILSKNIVAVGSLRREEKMLNDVDLLIIVPEKKLLKHVLPNIRIKGLSFSVKV CGERKCVLFIEWEKKTYQLDLFTALAEEKPYAIFHFTGPVSYLIRIRAALKKKNYKLNQYGLFKNQTLVPLKITTEKELI KELGFTYRIPKKRL ; _entity_poly.pdbx_seq_one_letter_code_can ;MLTLIQGKKIVNHLRSRLAFEYNGQLIKILSKNIVAVGSLRREEKMLNDVDLLIIVPEKKLLKHVLPNIRIKGLSFSVKV CGERKCVLFIEWEKKTYQLDLFTALAEEKPYAIFHFTGPVSYLIRIRAALKKKNYKLNQYGLFKNQTLVPLKITTEKELI KELGFTYRIPKKRL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LEU n 1 3 THR n 1 4 LEU n 1 5 ILE n 1 6 GLN n 1 7 GLY n 1 8 LYS n 1 9 LYS n 1 10 ILE n 1 11 VAL n 1 12 ASN n 1 13 HIS n 1 14 LEU n 1 15 ARG n 1 16 SER n 1 17 ARG n 1 18 LEU n 1 19 ALA n 1 20 PHE n 1 21 GLU n 1 22 TYR n 1 23 ASN n 1 24 GLY n 1 25 GLN n 1 26 LEU n 1 27 ILE n 1 28 LYS n 1 29 ILE n 1 30 LEU n 1 31 SER n 1 32 LYS n 1 33 ASN n 1 34 ILE n 1 35 VAL n 1 36 ALA n 1 37 VAL n 1 38 GLY n 1 39 SER n 1 40 LEU n 1 41 ARG n 1 42 ARG n 1 43 GLU n 1 44 GLU n 1 45 LYS n 1 46 MET n 1 47 LEU n 1 48 ASN n 1 49 ASP n 1 50 VAL n 1 51 ASP n 1 52 LEU n 1 53 LEU n 1 54 ILE n 1 55 ILE n 1 56 VAL n 1 57 PRO n 1 58 GLU n 1 59 LYS n 1 60 LYS n 1 61 LEU n 1 62 LEU n 1 63 LYS n 1 64 HIS n 1 65 VAL n 1 66 LEU n 1 67 PRO n 1 68 ASN n 1 69 ILE n 1 70 ARG n 1 71 ILE n 1 72 LYS n 1 73 GLY n 1 74 LEU n 1 75 SER n 1 76 PHE n 1 77 SER n 1 78 VAL n 1 79 LYS n 1 80 VAL n 1 81 CYS n 1 82 GLY n 1 83 GLU n 1 84 ARG n 1 85 LYS n 1 86 CYS n 1 87 VAL n 1 88 LEU n 1 89 PHE n 1 90 ILE n 1 91 GLU n 1 92 TRP n 1 93 GLU n 1 94 LYS n 1 95 LYS n 1 96 THR n 1 97 TYR n 1 98 GLN n 1 99 LEU n 1 100 ASP n 1 101 LEU n 1 102 PHE n 1 103 THR n 1 104 ALA n 1 105 LEU n 1 106 ALA n 1 107 GLU n 1 108 GLU n 1 109 LYS n 1 110 PRO n 1 111 TYR n 1 112 ALA n 1 113 ILE n 1 114 PHE n 1 115 HIS n 1 116 PHE n 1 117 THR n 1 118 GLY n 1 119 PRO n 1 120 VAL n 1 121 SER n 1 122 TYR n 1 123 LEU n 1 124 ILE n 1 125 ARG n 1 126 ILE n 1 127 ARG n 1 128 ALA n 1 129 ALA n 1 130 LEU n 1 131 LYS n 1 132 LYS n 1 133 LYS n 1 134 ASN n 1 135 TYR n 1 136 LYS n 1 137 LEU n 1 138 ASN n 1 139 GLN n 1 140 TYR n 1 141 GLY n 1 142 LEU n 1 143 PHE n 1 144 LYS n 1 145 ASN n 1 146 GLN n 1 147 THR n 1 148 LEU n 1 149 VAL n 1 150 PRO n 1 151 LEU n 1 152 LYS n 1 153 ILE n 1 154 THR n 1 155 THR n 1 156 GLU n 1 157 LYS n 1 158 GLU n 1 159 LEU n 1 160 ILE n 1 161 LYS n 1 162 GLU n 1 163 LEU n 1 164 GLY n 1 165 PHE n 1 166 THR n 1 167 TYR n 1 168 ARG n 1 169 ILE n 1 170 PRO n 1 171 LYS n 1 172 LYS n 1 173 ARG n 1 174 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'African swine fever virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10497 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-17b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DPOLX_ASFB7 _struct_ref.pdbx_db_accession P42494 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MLTLIQGKKIVNHLRSRLAFEYNGQLIKILSKNIVAVGSLRREEKMLNDVDLLIIVPEKKLLKHVLPNIRIKGLSFSVKV CGERKCVLFIEWEKKTYQLDLFTALAEEKPYAIFHFTGPVSYLIRIRAALKKKNYKLNQYGLFKNQTLVPLKITTEKELI KELGFTYRIPKKRL ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2M2U _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 174 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P42494 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 174 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 174 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DGT non-polymer . "2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O13 P3' 507.181 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '2D 1H-13C HSQC' 1 3 2 '3D HNCO' 1 4 2 '3D HNCA' 1 5 2 '3D HNCACB' 1 6 1 '3D HCCH-TOCSY' 1 7 1 '3D 1H-15N NOESY' 1 8 1 '3D 1H-13C NOESY aliphatic' 1 9 1 '2D 1H-13C HSQC aromatic' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 100 _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 293 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system ;0.5 mM [U-100% 13C; U-100% 15N] protein_1, 5 mM [U-100% 13C; U-100% 15N] 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 10 mM MG2, 10 mM [U-100% 2H] DTT, 50 mM Borate, 50 mM potassium chloride, 95% H2O/5% D2O ; 1 '95% H2O/5% D2O' ;0.5 mM [U-13C; U-15N; U-2H] protein_1, 5 mM 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 10 mM MG2, 10 mM [U-100% 2H] DTT, 50 mM Borate, 50 mM potassium chloride, 95% H2O/5% D2O ; 2 '95% H2O/5% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 800 Bruker Avance 1 'Bruker Avance' 850 Bruker Avance 2 'Bruker Avance' 600 Bruker Avance 3 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2M2U _pdbx_nmr_refine.method 'distance geometry' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 2000 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2M2U _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2M2U _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA ? 1 'Dr. Alexandre Bonvin' refinement Haddock ? 2 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2M2U _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2M2U _struct.title 'Binary complex of African Swine Fever Virus Pol X with MgdGTP' _struct.pdbx_descriptor 'Repair DNA polymerase X (E.C.2.7.7.7)' _struct.pdbx_model_details 'lowest energy, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2M2U _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'DNA polymerase, Nucleotidyl Transferase, TRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 4 ? ARG A 17 ? LEU A 4 ARG A 17 1 ? 14 HELX_P HELX_P2 2 GLY A 38 ? GLU A 43 ? GLY A 38 GLU A 43 1 ? 6 HELX_P HELX_P3 3 GLU A 58 ? HIS A 64 ? GLU A 58 HIS A 64 1 ? 7 HELX_P HELX_P4 4 GLU A 108 ? GLY A 118 ? GLU A 108 GLY A 118 1 ? 11 HELX_P HELX_P5 5 PRO A 119 ? LYS A 133 ? PRO A 119 LYS A 133 1 ? 15 HELX_P HELX_P6 6 THR A 155 ? GLY A 164 ? THR A 155 GLY A 164 1 ? 10 HELX_P HELX_P7 7 ILE A 169 ? ARG A 173 ? ILE A 169 ARG A 173 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? B DGT . O2B ? ? ? 1_555 D MG . MG ? ? A DGT 201 A MG 203 1_555 ? ? ? ? ? ? ? 2.148 ? metalc2 metalc ? ? A ASP 51 OD1 ? ? ? 1_555 D MG . MG ? ? A ASP 51 A MG 203 1_555 ? ? ? ? ? ? ? 2.505 ? metalc3 metalc ? ? B DGT . O3A ? ? ? 1_555 D MG . MG ? ? A DGT 201 A MG 203 1_555 ? ? ? ? ? ? ? 2.752 ? metalc4 metalc ? ? A ASP 49 OD2 ? ? ? 1_555 D MG . MG ? ? A ASP 49 A MG 203 1_555 ? ? ? ? ? ? ? 3.285 ? metalc5 metalc ? ? B DGT . O1A ? ? ? 1_555 C MG . MG ? ? A DGT 201 A MG 202 1_555 ? ? ? ? ? ? ? 2.814 ? metalc6 metalc ? ? A ASP 51 OD1 ? ? ? 1_555 C MG . MG ? ? A ASP 51 A MG 202 1_555 ? ? ? ? ? ? ? 2.887 ? metalc7 metalc ? ? A ASP 49 OD1 ? ? ? 1_555 D MG . MG ? ? A ASP 49 A MG 203 1_555 ? ? ? ? ? ? ? 2.757 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? C ? 5 ? D ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 2 ? THR A 3 ? LEU A 2 THR A 3 A 2 MET A 46 ? LEU A 47 ? MET A 46 LEU A 47 B 1 GLN A 25 ? ILE A 29 ? GLN A 25 ILE A 29 B 2 LEU A 18 ? TYR A 22 ? LEU A 18 TYR A 22 B 3 ASN A 68 ? ILE A 71 ? ASN A 68 ILE A 71 C 1 ILE A 34 ? VAL A 37 ? ILE A 34 VAL A 37 C 2 VAL A 50 ? VAL A 56 ? VAL A 50 VAL A 56 C 3 LYS A 95 ? LEU A 105 ? LYS A 95 LEU A 105 C 4 LYS A 85 ? TRP A 92 ? LYS A 85 TRP A 92 C 5 SER A 75 ? CYS A 81 ? SER A 75 CYS A 81 D 1 TYR A 135 ? ASN A 138 ? TYR A 135 ASN A 138 D 2 GLY A 141 ? LYS A 144 ? GLY A 141 LYS A 144 D 3 THR A 147 ? VAL A 149 ? THR A 147 VAL A 149 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 2 ? N LEU A 2 O LEU A 47 ? O LEU A 47 B 1 2 O ILE A 27 ? O ILE A 27 N PHE A 20 ? N PHE A 20 B 2 3 N ALA A 19 ? N ALA A 19 O ARG A 70 ? O ARG A 70 C 1 2 N VAL A 37 ? N VAL A 37 O ASP A 51 ? O ASP A 51 C 2 3 N LEU A 52 ? N LEU A 52 O ASP A 100 ? O ASP A 100 C 3 4 O TYR A 97 ? O TYR A 97 N ILE A 90 ? N ILE A 90 C 4 5 O VAL A 87 ? O VAL A 87 N LYS A 79 ? N LYS A 79 D 1 2 N LYS A 136 ? N LYS A 136 O PHE A 143 ? O PHE A 143 D 2 3 N LEU A 142 ? N LEU A 142 O VAL A 149 ? O VAL A 149 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 15 'BINDING SITE FOR RESIDUE DGT A 201' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE MG A 202' AC3 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE MG A 203' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 15 VAL A 37 ? VAL A 37 . ? 1_555 ? 2 AC1 15 GLY A 38 ? GLY A 38 . ? 1_555 ? 3 AC1 15 SER A 39 ? SER A 39 . ? 1_555 ? 4 AC1 15 ARG A 42 ? ARG A 42 . ? 1_555 ? 5 AC1 15 LEU A 47 ? LEU A 47 . ? 1_555 ? 6 AC1 15 ASN A 48 ? ASN A 48 . ? 1_555 ? 7 AC1 15 ASP A 49 ? ASP A 49 . ? 1_555 ? 8 AC1 15 ASP A 51 ? ASP A 51 . ? 1_555 ? 9 AC1 15 LYS A 85 ? LYS A 85 . ? 1_555 ? 10 AC1 15 HIS A 115 ? HIS A 115 . ? 1_555 ? 11 AC1 15 PHE A 116 ? PHE A 116 . ? 1_555 ? 12 AC1 15 GLY A 118 ? GLY A 118 . ? 1_555 ? 13 AC1 15 VAL A 120 ? VAL A 120 . ? 1_555 ? 14 AC1 15 MG C . ? MG A 202 . ? 1_555 ? 15 AC1 15 MG D . ? MG A 203 . ? 1_555 ? 16 AC2 5 ASP A 49 ? ASP A 49 . ? 1_555 ? 17 AC2 5 ASP A 51 ? ASP A 51 . ? 1_555 ? 18 AC2 5 ASP A 100 ? ASP A 100 . ? 1_555 ? 19 AC2 5 DGT B . ? DGT A 201 . ? 1_555 ? 20 AC2 5 MG D . ? MG A 203 . ? 1_555 ? 21 AC3 4 ASP A 49 ? ASP A 49 . ? 1_555 ? 22 AC3 4 ASP A 51 ? ASP A 51 . ? 1_555 ? 23 AC3 4 DGT B . ? DGT A 201 . ? 1_555 ? 24 AC3 4 MG C . ? MG A 202 . ? 1_555 ? # _atom_sites.entry_id 2M2U _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 LEU 2 2 2 LEU LEU A . n A 1 3 THR 3 3 3 THR THR A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 GLN 6 6 6 GLN GLN A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 ILE 10 10 10 ILE ILE A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 HIS 13 13 13 HIS HIS A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 ARG 15 15 15 ARG ARG A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 PHE 20 20 20 PHE PHE A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 TYR 22 22 22 TYR TYR A . n A 1 23 ASN 23 23 23 ASN ASN A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 GLN 25 25 25 GLN GLN A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 ILE 27 27 27 ILE ILE A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 ILE 29 29 29 ILE ILE A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 ASN 33 33 33 ASN ASN A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 ALA 36 36 36 ALA ALA A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 ARG 41 41 41 ARG ARG A . n A 1 42 ARG 42 42 42 ARG ARG A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 MET 46 46 46 MET MET A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 ASN 48 48 48 ASN ASN A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 VAL 50 50 50 VAL VAL A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 PRO 57 57 57 PRO PRO A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 LYS 59 59 59 LYS LYS A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 HIS 64 64 64 HIS HIS A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 PRO 67 67 67 PRO PRO A . n A 1 68 ASN 68 68 68 ASN ASN A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 ILE 71 71 71 ILE ILE A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 SER 75 75 75 SER SER A . n A 1 76 PHE 76 76 76 PHE PHE A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 LYS 79 79 79 LYS LYS A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 CYS 81 81 81 CYS CYS A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 GLU 83 83 83 GLU GLU A . n A 1 84 ARG 84 84 84 ARG ARG A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 CYS 86 86 86 CYS CYS A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 LEU 88 88 88 LEU LEU A . n A 1 89 PHE 89 89 89 PHE PHE A . n A 1 90 ILE 90 90 90 ILE ILE A . n A 1 91 GLU 91 91 91 GLU GLU A . n A 1 92 TRP 92 92 92 TRP TRP A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 LYS 94 94 94 LYS LYS A . n A 1 95 LYS 95 95 95 LYS LYS A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 TYR 97 97 97 TYR TYR A . n A 1 98 GLN 98 98 98 GLN GLN A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 ASP 100 100 100 ASP ASP A . n A 1 101 LEU 101 101 101 LEU LEU A . n A 1 102 PHE 102 102 102 PHE PHE A . n A 1 103 THR 103 103 103 THR THR A . n A 1 104 ALA 104 104 104 ALA ALA A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 GLU 107 107 107 GLU GLU A . n A 1 108 GLU 108 108 108 GLU GLU A . n A 1 109 LYS 109 109 109 LYS LYS A . n A 1 110 PRO 110 110 110 PRO PRO A . n A 1 111 TYR 111 111 111 TYR TYR A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 ILE 113 113 113 ILE ILE A . n A 1 114 PHE 114 114 114 PHE PHE A . n A 1 115 HIS 115 115 115 HIS HIS A . n A 1 116 PHE 116 116 116 PHE PHE A . n A 1 117 THR 117 117 117 THR THR A . n A 1 118 GLY 118 118 118 GLY GLY A . n A 1 119 PRO 119 119 119 PRO PRO A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 SER 121 121 121 SER SER A . n A 1 122 TYR 122 122 122 TYR TYR A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 ILE 124 124 124 ILE ILE A . n A 1 125 ARG 125 125 125 ARG ARG A . n A 1 126 ILE 126 126 126 ILE ILE A . n A 1 127 ARG 127 127 127 ARG ARG A . n A 1 128 ALA 128 128 128 ALA ALA A . n A 1 129 ALA 129 129 129 ALA ALA A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 LYS 132 132 132 LYS LYS A . n A 1 133 LYS 133 133 133 LYS LYS A . n A 1 134 ASN 134 134 134 ASN ASN A . n A 1 135 TYR 135 135 135 TYR TYR A . n A 1 136 LYS 136 136 136 LYS LYS A . n A 1 137 LEU 137 137 137 LEU LEU A . n A 1 138 ASN 138 138 138 ASN ASN A . n A 1 139 GLN 139 139 139 GLN GLN A . n A 1 140 TYR 140 140 140 TYR TYR A . n A 1 141 GLY 141 141 141 GLY GLY A . n A 1 142 LEU 142 142 142 LEU LEU A . n A 1 143 PHE 143 143 143 PHE PHE A . n A 1 144 LYS 144 144 144 LYS LYS A . n A 1 145 ASN 145 145 145 ASN ASN A . n A 1 146 GLN 146 146 146 GLN GLN A . n A 1 147 THR 147 147 147 THR THR A . n A 1 148 LEU 148 148 148 LEU LEU A . n A 1 149 VAL 149 149 149 VAL VAL A . n A 1 150 PRO 150 150 150 PRO PRO A . n A 1 151 LEU 151 151 151 LEU LEU A . n A 1 152 LYS 152 152 152 LYS LYS A . n A 1 153 ILE 153 153 153 ILE ILE A . n A 1 154 THR 154 154 154 THR THR A . n A 1 155 THR 155 155 155 THR THR A . n A 1 156 GLU 156 156 156 GLU GLU A . n A 1 157 LYS 157 157 157 LYS LYS A . n A 1 158 GLU 158 158 158 GLU GLU A . n A 1 159 LEU 159 159 159 LEU LEU A . n A 1 160 ILE 160 160 160 ILE ILE A . n A 1 161 LYS 161 161 161 LYS LYS A . n A 1 162 GLU 162 162 162 GLU GLU A . n A 1 163 LEU 163 163 163 LEU LEU A . n A 1 164 GLY 164 164 164 GLY GLY A . n A 1 165 PHE 165 165 165 PHE PHE A . n A 1 166 THR 166 166 166 THR THR A . n A 1 167 TYR 167 167 167 TYR TYR A . n A 1 168 ARG 168 168 168 ARG ARG A . n A 1 169 ILE 169 169 169 ILE ILE A . n A 1 170 PRO 170 170 170 PRO PRO A . n A 1 171 LYS 171 171 171 LYS LYS A . n A 1 172 LYS 172 172 172 LYS LYS A . n A 1 173 ARG 173 173 173 ARG ARG A . n A 1 174 LEU 174 174 174 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DGT 1 201 450 DGT DGT A . C 3 MG 1 202 550 MG MG A . D 3 MG 1 203 600 MG MG A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O2B ? B DGT . ? A DGT 201 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 OD1 ? A ASP 51 ? A ASP 51 ? 1_555 81.0 ? 2 O2B ? B DGT . ? A DGT 201 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O3A ? B DGT . ? A DGT 201 ? 1_555 60.3 ? 3 OD1 ? A ASP 51 ? A ASP 51 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O3A ? B DGT . ? A DGT 201 ? 1_555 59.1 ? 4 O2B ? B DGT . ? A DGT 201 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 OD2 ? A ASP 49 ? A ASP 49 ? 1_555 155.0 ? 5 OD1 ? A ASP 51 ? A ASP 51 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 OD2 ? A ASP 49 ? A ASP 49 ? 1_555 101.0 ? 6 O3A ? B DGT . ? A DGT 201 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 OD2 ? A ASP 49 ? A ASP 49 ? 1_555 99.0 ? 7 O2B ? B DGT . ? A DGT 201 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 OD1 ? A ASP 49 ? A ASP 49 ? 1_555 142.0 ? 8 OD1 ? A ASP 51 ? A ASP 51 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 OD1 ? A ASP 49 ? A ASP 49 ? 1_555 62.7 ? 9 O3A ? B DGT . ? A DGT 201 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 OD1 ? A ASP 49 ? A ASP 49 ? 1_555 89.9 ? 10 OD2 ? A ASP 49 ? A ASP 49 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 OD1 ? A ASP 49 ? A ASP 49 ? 1_555 40.6 ? 11 O1A ? B DGT . ? A DGT 201 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 OD1 ? A ASP 51 ? A ASP 51 ? 1_555 71.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-04-02 2 'Structure model' 1 1 2014-11-12 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_nmr_ensemble_rms.atom_type ? _pdbx_nmr_ensemble_rms.bond_angle_rms_dev ? _pdbx_nmr_ensemble_rms.bond_angle_rms_dev_error ? _pdbx_nmr_ensemble_rms.chain_range_begin ? _pdbx_nmr_ensemble_rms.chain_range_end ? _pdbx_nmr_ensemble_rms.coord_average_rmsd_method ? _pdbx_nmr_ensemble_rms.covalent_bond_rms_dev ? _pdbx_nmr_ensemble_rms.covalent_bond_rms_dev_error ? _pdbx_nmr_ensemble_rms.dihedral_angles_rms_dev ? _pdbx_nmr_ensemble_rms.dihedral_angles_rms_dev_error ? _pdbx_nmr_ensemble_rms.distance_rms_dev 0.07 _pdbx_nmr_ensemble_rms.distance_rms_dev_error 0.01 _pdbx_nmr_ensemble_rms.entry_id 2M2U _pdbx_nmr_ensemble_rms.improper_torsion_angle_rms_dev ? _pdbx_nmr_ensemble_rms.improper_torsion_angle_rms_dev_error ? _pdbx_nmr_ensemble_rms.peptide_planarity_rms_dev ? _pdbx_nmr_ensemble_rms.peptide_planarity_rms_dev_error ? _pdbx_nmr_ensemble_rms.residue_range_begin ? _pdbx_nmr_ensemble_rms.residue_range_end ? # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id entity_1-1 0.5 ? mM '[U-100% 13C; U-100% 15N]' 1 "2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE-2" 5 ? mM '[U-100% 13C; U-100% 15N]' 1 MG2-3 10 ? mM ? 1 DTT-4 10 ? mM '[U-100% 2H]' 1 Borate-5 50 ? mM ? 1 'potassium chloride-6' 50 ? mM ? 1 entity_1-7 0.5 ? mM '[U-13C; U-15N; U-2H]' 2 "2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE-8" 5 ? mM ? 2 MG2-9 10 ? mM ? 2 DTT-10 10 ? mM '[U-100% 2H]' 2 Borate-11 50 ? mM ? 2 'potassium chloride-12' 50 ? mM ? 2 # _pdbx_nmr_constraints.disulfide_bond_constraints_total_count ? _pdbx_nmr_constraints.entry_id 2M2U _pdbx_nmr_constraints.hydrogen_bond_constraints_total_count ? _pdbx_nmr_constraints.NA_alpha-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_beta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_chi-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_delta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_epsilon-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_gamma-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_other-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_sugar_pucker_constraints_total_count ? _pdbx_nmr_constraints.NOE_constraints_total 3066 _pdbx_nmr_constraints.NOE_interentity_total_count ? _pdbx_nmr_constraints.NOE_interproton_distance_evaluation ? _pdbx_nmr_constraints.NOE_intraresidue_total_count 1359 _pdbx_nmr_constraints.NOE_long_range_total_count 605 _pdbx_nmr_constraints.NOE_medium_range_total_count 543 _pdbx_nmr_constraints.NOE_motional_averaging_correction ? _pdbx_nmr_constraints.NOE_pseudoatom_corrections ? _pdbx_nmr_constraints.NOE_sequential_total_count 541 _pdbx_nmr_constraints.protein_chi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_other_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_phi_angle_constraints_total_count 155 _pdbx_nmr_constraints.protein_psi_angle_constraints_total_count 155 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O3G A DGT 201 ? ? MG A MG 203 ? ? 1.28 2 1 OD2 A ASP 51 ? ? MG A MG 202 ? ? 1.52 3 1 OD2 A ASP 100 ? ? MG A MG 202 ? ? 1.56 4 1 OD1 A ASP 49 ? ? MG A MG 202 ? ? 1.60 5 1 O A ASP 49 ? ? MG A MG 203 ? ? 1.63 6 2 O3G A DGT 201 ? ? MG A MG 203 ? ? 1.28 7 2 OD2 A ASP 51 ? ? MG A MG 202 ? ? 1.49 8 2 OD2 A ASP 100 ? ? MG A MG 202 ? ? 1.56 9 2 OE2 A GLU 158 ? ? HZ2 A LYS 161 ? ? 1.59 10 2 OE2 A GLU 43 ? ? HZ2 A LYS 171 ? ? 1.60 11 3 O3G A DGT 201 ? ? MG A MG 203 ? ? 1.31 12 3 OD2 A ASP 51 ? ? MG A MG 202 ? ? 1.50 13 3 OD2 A ASP 100 ? ? MG A MG 202 ? ? 1.56 14 4 O3G A DGT 201 ? ? MG A MG 203 ? ? 1.32 15 4 OD2 A ASP 51 ? ? MG A MG 202 ? ? 1.51 16 4 OD2 A ASP 100 ? ? MG A MG 202 ? ? 1.57 17 4 OD2 A ASP 49 ? ? MG A MG 202 ? ? 1.61 18 5 O3G A DGT 201 ? ? MG A MG 203 ? ? 1.30 19 5 OD2 A ASP 51 ? ? MG A MG 202 ? ? 1.51 20 5 OD2 A ASP 100 ? ? MG A MG 202 ? ? 1.55 21 5 OE1 A GLU 43 ? ? HZ2 A LYS 171 ? ? 1.60 22 5 OD2 A ASP 49 ? ? MG A MG 202 ? ? 1.63 23 5 O A ASP 49 ? ? MG A MG 203 ? ? 1.63 24 6 O3G A DGT 201 ? ? MG A MG 203 ? ? 1.30 25 6 OD2 A ASP 51 ? ? MG A MG 202 ? ? 1.51 26 6 OE2 A GLU 44 ? ? HZ2 A LYS 45 ? ? 1.60 27 6 OD2 A ASP 100 ? ? MG A MG 202 ? ? 1.60 28 7 O3G A DGT 201 ? ? MG A MG 203 ? ? 1.29 29 7 OD2 A ASP 51 ? ? MG A MG 202 ? ? 1.51 30 7 OD2 A ASP 100 ? ? MG A MG 202 ? ? 1.55 31 7 OD2 A ASP 49 ? ? MG A MG 202 ? ? 1.56 32 7 OE1 A GLU 44 ? ? HZ2 A LYS 45 ? ? 1.59 33 7 HH22 A ARG 41 ? ? OE2 A GLU 156 ? ? 1.59 34 8 O2G A DGT 201 ? ? MG A MG 203 ? ? 1.36 35 8 OD2 A ASP 51 ? ? MG A MG 202 ? ? 1.50 36 8 OD2 A ASP 100 ? ? MG A MG 202 ? ? 1.55 37 8 OE1 A GLU 158 ? ? HZ1 A LYS 161 ? ? 1.57 38 8 O A ASP 49 ? ? MG A MG 203 ? ? 1.63 39 9 O3G A DGT 201 ? ? MG A MG 203 ? ? 1.29 40 9 OD2 A ASP 51 ? ? MG A MG 202 ? ? 1.53 41 9 OE1 A GLU 43 ? ? HZ1 A LYS 171 ? ? 1.54 42 9 OD2 A ASP 100 ? ? MG A MG 202 ? ? 1.60 43 9 OD2 A ASP 49 ? ? MG A MG 202 ? ? 1.60 44 10 O3G A DGT 201 ? ? MG A MG 203 ? ? 1.29 45 10 OD2 A ASP 51 ? ? MG A MG 202 ? ? 1.50 46 10 OD2 A ASP 100 ? ? MG A MG 202 ? ? 1.55 47 10 HH22 A ARG 41 ? ? OE2 A GLU 156 ? ? 1.58 48 10 OD2 A ASP 49 ? ? MG A MG 202 ? ? 1.60 49 11 O3G A DGT 201 ? ? MG A MG 203 ? ? 1.31 50 11 OD2 A ASP 51 ? ? MG A MG 202 ? ? 1.54 51 11 OD2 A ASP 100 ? ? MG A MG 202 ? ? 1.55 52 11 OD1 A ASP 49 ? ? MG A MG 202 ? ? 1.60 53 12 O3G A DGT 201 ? ? MG A MG 203 ? ? 1.30 54 12 OD2 A ASP 51 ? ? MG A MG 202 ? ? 1.54 55 12 OD2 A ASP 100 ? ? MG A MG 202 ? ? 1.57 56 12 OD1 A ASP 49 ? ? MG A MG 202 ? ? 1.60 57 12 O A ASP 49 ? ? MG A MG 203 ? ? 1.65 58 13 O3G A DGT 201 ? ? MG A MG 203 ? ? 1.27 59 13 OD2 A ASP 51 ? ? MG A MG 202 ? ? 1.54 60 13 OD2 A ASP 100 ? ? MG A MG 202 ? ? 1.57 61 13 OD1 A ASP 49 ? ? MG A MG 202 ? ? 1.57 62 13 O A ASP 49 ? ? MG A MG 203 ? ? 1.59 63 13 HH22 A ARG 41 ? ? OE2 A GLU 156 ? ? 1.59 64 13 HZ3 A LYS 85 ? ? O6 A DGT 201 ? ? 1.60 65 13 O A LEU 142 ? ? H A VAL 149 ? ? 1.60 66 14 O3G A DGT 201 ? ? MG A MG 203 ? ? 1.29 67 14 OD2 A ASP 51 ? ? MG A MG 202 ? ? 1.53 68 14 OD2 A ASP 100 ? ? MG A MG 202 ? ? 1.57 69 14 OE1 A GLU 44 ? ? HZ3 A LYS 45 ? ? 1.57 70 14 OD2 A ASP 49 ? ? MG A MG 202 ? ? 1.58 71 15 O3G A DGT 201 ? ? MG A MG 203 ? ? 1.30 72 15 OD2 A ASP 51 ? ? MG A MG 202 ? ? 1.52 73 15 OD2 A ASP 100 ? ? MG A MG 202 ? ? 1.56 74 15 OD1 A ASP 49 ? ? MG A MG 202 ? ? 1.58 75 15 OE1 A GLU 43 ? ? HZ2 A LYS 171 ? ? 1.59 76 16 O3G A DGT 201 ? ? MG A MG 203 ? ? 1.30 77 16 OD2 A ASP 51 ? ? MG A MG 202 ? ? 1.51 78 16 OD2 A ASP 49 ? ? MG A MG 202 ? ? 1.58 79 16 OD2 A ASP 100 ? ? MG A MG 202 ? ? 1.59 80 16 HZ1 A LYS 152 ? ? OE2 A GLU 162 ? ? 1.59 81 17 O3G A DGT 201 ? ? MG A MG 203 ? ? 1.28 82 17 OD2 A ASP 51 ? ? MG A MG 202 ? ? 1.54 83 17 OE2 A GLU 43 ? ? HZ2 A LYS 171 ? ? 1.56 84 17 OD1 A ASP 49 ? ? MG A MG 202 ? ? 1.59 85 17 O A ASP 49 ? ? MG A MG 203 ? ? 1.68 86 18 O3G A DGT 201 ? ? MG A MG 203 ? ? 1.31 87 18 OD2 A ASP 51 ? ? MG A MG 202 ? ? 1.55 88 18 OD2 A ASP 49 ? ? MG A MG 202 ? ? 1.58 89 18 OD2 A ASP 100 ? ? MG A MG 202 ? ? 1.59 90 19 O3G A DGT 201 ? ? MG A MG 203 ? ? 1.28 91 19 OD2 A ASP 51 ? ? MG A MG 202 ? ? 1.53 92 19 OD2 A ASP 100 ? ? MG A MG 202 ? ? 1.54 93 19 HZ3 A LYS 152 ? ? OE2 A GLU 162 ? ? 1.60 94 20 OD2 A ASP 51 ? ? MG A MG 202 ? ? 1.53 95 20 OD2 A ASP 100 ? ? MG A MG 202 ? ? 1.54 96 20 O A ASP 49 ? ? MG A MG 203 ? ? 1.57 97 20 H A VAL 37 ? ? O A ASP 51 ? ? 1.60 98 20 OD2 A ASP 49 ? ? MG A MG 202 ? ? 1.67 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 48 ? ? -78.89 -76.85 2 1 GLN A 146 ? ? 75.34 -7.47 3 1 THR A 154 ? ? -144.35 -16.27 4 1 ARG A 173 ? ? 67.33 145.37 5 2 ASN A 48 ? ? -122.53 -54.09 6 2 ASN A 134 ? ? 74.56 36.03 7 2 ASN A 145 ? ? 71.70 -64.40 8 2 GLN A 146 ? ? -167.87 8.72 9 2 ARG A 173 ? ? 61.63 130.10 10 3 GLU A 43 ? ? 72.69 51.55 11 3 THR A 117 ? ? -50.74 -73.51 12 3 ASN A 134 ? ? 74.30 35.39 13 3 THR A 154 ? ? -142.81 -5.29 14 3 ARG A 173 ? ? 66.79 126.08 15 4 THR A 117 ? ? -48.78 -72.06 16 4 ASN A 134 ? ? 73.54 38.72 17 4 GLN A 146 ? ? 68.92 -6.81 18 4 THR A 154 ? ? -142.03 -14.41 19 4 ARG A 173 ? ? 68.40 139.98 20 5 PRO A 57 ? ? -69.85 0.53 21 5 THR A 117 ? ? -52.07 -73.05 22 5 ASN A 134 ? ? 74.26 31.99 23 5 ASN A 145 ? ? 67.58 -70.09 24 5 GLN A 146 ? ? -152.91 0.13 25 5 THR A 154 ? ? -147.65 -8.40 26 5 ARG A 173 ? ? 61.00 147.76 27 6 GLU A 43 ? ? 72.80 50.74 28 6 LYS A 72 ? ? -56.59 108.15 29 6 ASN A 134 ? ? 72.59 41.91 30 6 ASN A 145 ? ? 65.54 -71.77 31 6 ARG A 173 ? ? 55.23 161.83 32 7 THR A 117 ? ? -52.47 -71.21 33 7 GLN A 146 ? ? 75.50 -1.81 34 7 THR A 154 ? ? -148.12 -11.21 35 7 ARG A 173 ? ? 65.16 145.38 36 8 THR A 117 ? ? -49.17 -73.83 37 8 ASN A 134 ? ? 73.01 35.71 38 8 GLN A 146 ? ? 77.73 -6.05 39 8 THR A 154 ? ? -140.21 -11.57 40 8 ARG A 173 ? ? 61.52 134.30 41 9 ASN A 134 ? ? 72.81 42.61 42 9 GLN A 146 ? ? 72.49 -2.22 43 9 ARG A 173 ? ? -87.77 -133.20 44 10 GLU A 43 ? ? 73.06 54.65 45 10 ASN A 134 ? ? 73.35 42.43 46 10 GLN A 146 ? ? 68.21 -5.23 47 10 PRO A 150 ? ? -69.90 -177.71 48 10 ARG A 173 ? ? 59.50 138.90 49 11 ASN A 48 ? ? -91.60 -61.45 50 11 THR A 117 ? ? -51.79 -72.94 51 11 ASN A 134 ? ? 73.04 40.00 52 11 GLN A 139 ? ? -74.74 20.22 53 11 GLN A 146 ? ? 75.89 -13.42 54 11 THR A 154 ? ? -142.26 -12.84 55 11 ARG A 173 ? ? 59.41 132.76 56 12 GLU A 43 ? ? 70.49 50.70 57 12 ASN A 134 ? ? 74.93 36.97 58 12 GLN A 139 ? ? -71.89 20.72 59 12 GLN A 146 ? ? 70.48 -6.90 60 12 THR A 154 ? ? -145.51 -6.15 61 12 ARG A 173 ? ? 66.43 129.90 62 13 GLU A 43 ? ? 74.55 46.41 63 13 THR A 117 ? ? -52.63 -71.78 64 13 ASN A 145 ? ? 66.28 -72.94 65 13 THR A 154 ? ? -148.82 16.38 66 13 ARG A 173 ? ? 63.32 123.63 67 14 ASN A 134 ? ? 75.12 43.97 68 14 THR A 154 ? ? -142.63 -9.67 69 14 ARG A 173 ? ? 68.54 126.56 70 15 GLU A 43 ? ? 73.31 51.84 71 15 ASN A 134 ? ? 75.46 35.03 72 15 GLN A 139 ? ? -72.02 21.70 73 15 GLN A 146 ? ? 72.40 -3.00 74 15 THR A 154 ? ? -146.56 -11.42 75 15 ARG A 173 ? ? 71.54 135.38 76 16 ASN A 134 ? ? 72.14 36.22 77 16 THR A 154 ? ? -153.31 -14.63 78 16 ARG A 173 ? ? 59.04 137.13 79 17 GLU A 43 ? ? 72.90 53.25 80 17 ASN A 134 ? ? 73.56 30.05 81 17 ASN A 145 ? ? 57.10 -69.74 82 17 THR A 154 ? ? -140.38 -10.26 83 17 ARG A 173 ? ? 57.06 121.51 84 18 GLU A 43 ? ? 75.68 57.04 85 18 ASN A 134 ? ? 73.11 37.03 86 18 ASN A 145 ? ? 62.35 -56.44 87 18 GLN A 146 ? ? -157.81 -5.50 88 18 ARG A 173 ? ? 66.79 131.46 89 19 ASN A 48 ? ? -131.46 -41.47 90 19 ASN A 134 ? ? 73.88 36.39 91 19 ASN A 145 ? ? 58.07 -72.52 92 19 THR A 154 ? ? -141.08 15.39 93 19 ARG A 173 ? ? 65.87 126.86 94 20 THR A 117 ? ? -54.14 -71.23 95 20 ASN A 134 ? ? 73.53 39.04 96 20 PRO A 150 ? ? -67.83 -177.31 97 20 THR A 154 ? ? -151.17 21.06 98 20 ARG A 173 ? ? 64.76 117.76 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE" DGT 3 'MAGNESIUM ION' MG #