data_2M3L # _entry.id 2M3L # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2M3L RCSB RCSB103165 BMRB 18967 WWPDB D_1000103165 # _pdbx_database_related.db_id 18967 _pdbx_database_related.db_name BMRB _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2M3L _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-01-21 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Mischo, A.' 1 'Ohlenschlager, O.' 2 'Gorlach, M.' 3 # _citation.id primary _citation.title 'Structural insights into a wildtype domain of the oncoprotein E6 and its interaction with a PDZ domain.' _citation.journal_abbrev 'Plos One' _citation.journal_volume 8 _citation.page_first e62584 _citation.page_last e62584 _citation.year 2013 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1932-6203 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23638119 _citation.pdbx_database_id_DOI 10.1371/journal.pone.0062584 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Mischo, A.' 1 primary 'Ohlenschlager, O.' 2 primary 'Hortschansky, P.' 3 primary 'Ramachandran, R.' 4 primary 'Gorlach, M.' 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein E6' 8951.210 1 ? ? 'E6, UNP residues 80-151' ? 2 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GSHMSRSVYGTTLEAITKKSLYDLSIRCHRCQRPLGPEEKQKLVDEKKRFHEIAGRWTGQCANCWQRTRQRNETQV _entity_poly.pdbx_seq_one_letter_code_can GSHMSRSVYGTTLEAITKKSLYDLSIRCHRCQRPLGPEEKQKLVDEKKRFHEIAGRWTGQCANCWQRTRQRNETQV _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 SER n 1 6 ARG n 1 7 SER n 1 8 VAL n 1 9 TYR n 1 10 GLY n 1 11 THR n 1 12 THR n 1 13 LEU n 1 14 GLU n 1 15 ALA n 1 16 ILE n 1 17 THR n 1 18 LYS n 1 19 LYS n 1 20 SER n 1 21 LEU n 1 22 TYR n 1 23 ASP n 1 24 LEU n 1 25 SER n 1 26 ILE n 1 27 ARG n 1 28 CYS n 1 29 HIS n 1 30 ARG n 1 31 CYS n 1 32 GLN n 1 33 ARG n 1 34 PRO n 1 35 LEU n 1 36 GLY n 1 37 PRO n 1 38 GLU n 1 39 GLU n 1 40 LYS n 1 41 GLN n 1 42 LYS n 1 43 LEU n 1 44 VAL n 1 45 ASP n 1 46 GLU n 1 47 LYS n 1 48 LYS n 1 49 ARG n 1 50 PHE n 1 51 HIS n 1 52 GLU n 1 53 ILE n 1 54 ALA n 1 55 GLY n 1 56 ARG n 1 57 TRP n 1 58 THR n 1 59 GLY n 1 60 GLN n 1 61 CYS n 1 62 ALA n 1 63 ASN n 1 64 CYS n 1 65 TRP n 1 66 GLN n 1 67 ARG n 1 68 THR n 1 69 ARG n 1 70 GLN n 1 71 ARG n 1 72 ASN n 1 73 GLU n 1 74 THR n 1 75 GLN n 1 76 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene E6 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'TYPE 51' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human papillomavirus type 51' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10595 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Bl21 (de3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector pET15B _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code VE6_HPV51 _struct_ref.pdbx_db_accession P26554 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code SRSVYGTTLEAITKKSLYDLSIRCHRCQRPLGPEEKQKLVDEKKRFHEIAGRWTGQCANCWQRTRQRNETQV _struct_ref.pdbx_align_begin 80 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2M3L _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 76 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P26554 _struct_ref_seq.db_align_beg 80 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 151 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 80 _struct_ref_seq.pdbx_auth_seq_align_end 151 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2M3L GLY A 1 ? UNP P26554 ? ? 'EXPRESSION TAG' 76 1 1 2M3L SER A 2 ? UNP P26554 ? ? 'EXPRESSION TAG' 77 2 1 2M3L HIS A 3 ? UNP P26554 ? ? 'EXPRESSION TAG' 78 3 1 2M3L MET A 4 ? UNP P26554 ? ? 'EXPRESSION TAG' 79 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '2D 1H-13C HSQC aliphatic' 1 3 2 '2D 1H-13C HSQC aromatic' 1 4 1 '3D HNCACB' 1 5 1 '3D HNHA' 1 6 1 '3D 1H-15N NOESY' 1 7 2 '3D 1H-13C HSQC NOESY aliphatic' 1 8 2 '3D 1H-13C NOESY aromatic' 1 9 2 '3D HCCH-COSY' 1 10 1 '3D HNCO' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 180 _pdbx_nmr_exptl_sample_conditions.pH 7.4 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 283 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system ;1.13 mM [U-100% 13C; U-100% 15N] E6, 90 mM sodium chloride, 45 mM L-arginine, 45 mM L-glutamate, 9 mM DTT, 0.05 w/v sodium azide, 90% H2O/10% D2O ; 1 '90% H2O/10% D2O' ;0.9 mM [U-100% 13C; U-100% 15N] E6, 90 mM sodium chloride, 45 mM L-arginine, 45 mM L-glutamate, 9 mM DTT, 0.05 w/v sodium azide, 100% D2O ; 2 '100% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 750 Bruker AvanceIII 1 'Bruker AvanceIII' 600 Bruker AvanceIII 2 'Bruker AvanceIII' # _pdbx_nmr_refine.entry_id 2M3L _pdbx_nmr_refine.method 'DGSA-distance geometry simulated annealing, molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2M3L _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2M3L _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA 3 1 'Brunger, Adams, Clore, Gros, Nilges and Read' refinement CNS ? 2 'Keller and Wuthrich' 'data analysis' CARA ? 3 'Bruker Biospin' 'collection & processing' TOPSPIN ? 4 'Guntert, Mumenthaler and Wuthrich' refinement CYANA 3 5 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2M3L _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2M3L _struct.title 'Solution structure of the C-terminal zinc-binding domain of HPV51 oncoprotein E6' _struct.pdbx_descriptor 'Protein E6' _struct.pdbx_model_details 'lowest energy, model1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2M3L _struct_keywords.pdbx_keywords ONCOPROTEIN _struct_keywords.text 'Papillomavirus E6 Proteins, HPV, Oncoprotein E6, Zinc Fingers, E6, Viral, Oncogene Proteins, ONCOPROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TYR A 9 ? THR A 17 ? TYR A 84 THR A 92 1 ? 9 HELX_P HELX_P2 2 GLY A 36 ? GLU A 46 ? GLY A 111 GLU A 121 1 ? 11 HELX_P HELX_P3 3 CYS A 61 ? ARG A 69 ? CYS A 136 ARG A 144 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A CYS 61 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 136 A ZN 201 1_555 ? ? ? ? ? ? ? 2.216 ? metalc2 metalc ? ? A CYS 64 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 139 A ZN 201 1_555 ? ? ? ? ? ? ? 2.230 ? metalc3 metalc ? ? A CYS 31 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 106 A ZN 201 1_555 ? ? ? ? ? ? ? 2.253 ? metalc4 metalc ? ? A CYS 28 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 103 A ZN 201 1_555 ? ? ? ? ? ? ? 2.449 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 6 ? VAL A 8 ? ARG A 81 VAL A 83 A 2 PHE A 50 ? ILE A 53 ? PHE A 125 ILE A 128 A 3 ARG A 56 ? GLY A 59 ? ARG A 131 GLY A 134 A 4 ARG A 27 ? CYS A 28 ? ARG A 102 CYS A 103 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 8 ? N VAL A 83 O PHE A 50 ? O PHE A 125 A 2 3 N HIS A 51 ? N HIS A 126 O THR A 58 ? O THR A 133 A 3 4 O GLY A 59 ? O GLY A 134 N ARG A 27 ? N ARG A 102 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE ZN A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 28 ? CYS A 103 . ? 1_555 ? 2 AC1 4 CYS A 31 ? CYS A 106 . ? 1_555 ? 3 AC1 4 CYS A 61 ? CYS A 136 . ? 1_555 ? 4 AC1 4 CYS A 64 ? CYS A 139 . ? 1_555 ? # _atom_sites.entry_id 2M3L _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 76 76 GLY GLY A . n A 1 2 SER 2 77 77 SER SER A . n A 1 3 HIS 3 78 78 HIS HIS A . n A 1 4 MET 4 79 79 MET MET A . n A 1 5 SER 5 80 80 SER SER A . n A 1 6 ARG 6 81 81 ARG ARG A . n A 1 7 SER 7 82 82 SER SER A . n A 1 8 VAL 8 83 83 VAL VAL A . n A 1 9 TYR 9 84 84 TYR TYR A . n A 1 10 GLY 10 85 85 GLY GLY A . n A 1 11 THR 11 86 86 THR THR A . n A 1 12 THR 12 87 87 THR THR A . n A 1 13 LEU 13 88 88 LEU LEU A . n A 1 14 GLU 14 89 89 GLU GLU A . n A 1 15 ALA 15 90 90 ALA ALA A . n A 1 16 ILE 16 91 91 ILE ILE A . n A 1 17 THR 17 92 92 THR THR A . n A 1 18 LYS 18 93 93 LYS LYS A . n A 1 19 LYS 19 94 94 LYS LYS A . n A 1 20 SER 20 95 95 SER SER A . n A 1 21 LEU 21 96 96 LEU LEU A . n A 1 22 TYR 22 97 97 TYR TYR A . n A 1 23 ASP 23 98 98 ASP ASP A . n A 1 24 LEU 24 99 99 LEU LEU A . n A 1 25 SER 25 100 100 SER SER A . n A 1 26 ILE 26 101 101 ILE ILE A . n A 1 27 ARG 27 102 102 ARG ARG A . n A 1 28 CYS 28 103 103 CYS CYS A . n A 1 29 HIS 29 104 104 HIS HIS A . n A 1 30 ARG 30 105 105 ARG ARG A . n A 1 31 CYS 31 106 106 CYS CYS A . n A 1 32 GLN 32 107 107 GLN GLN A . n A 1 33 ARG 33 108 108 ARG ARG A . n A 1 34 PRO 34 109 109 PRO PRO A . n A 1 35 LEU 35 110 110 LEU LEU A . n A 1 36 GLY 36 111 111 GLY GLY A . n A 1 37 PRO 37 112 112 PRO PRO A . n A 1 38 GLU 38 113 113 GLU GLU A . n A 1 39 GLU 39 114 114 GLU GLU A . n A 1 40 LYS 40 115 115 LYS LYS A . n A 1 41 GLN 41 116 116 GLN GLN A . n A 1 42 LYS 42 117 117 LYS LYS A . n A 1 43 LEU 43 118 118 LEU LEU A . n A 1 44 VAL 44 119 119 VAL VAL A . n A 1 45 ASP 45 120 120 ASP ASP A . n A 1 46 GLU 46 121 121 GLU GLU A . n A 1 47 LYS 47 122 122 LYS LYS A . n A 1 48 LYS 48 123 123 LYS LYS A . n A 1 49 ARG 49 124 124 ARG ARG A . n A 1 50 PHE 50 125 125 PHE PHE A . n A 1 51 HIS 51 126 126 HIS HIS A . n A 1 52 GLU 52 127 127 GLU GLU A . n A 1 53 ILE 53 128 128 ILE ILE A . n A 1 54 ALA 54 129 129 ALA ALA A . n A 1 55 GLY 55 130 130 GLY GLY A . n A 1 56 ARG 56 131 131 ARG ARG A . n A 1 57 TRP 57 132 132 TRP TRP A . n A 1 58 THR 58 133 133 THR THR A . n A 1 59 GLY 59 134 134 GLY GLY A . n A 1 60 GLN 60 135 135 GLN GLN A . n A 1 61 CYS 61 136 136 CYS CYS A . n A 1 62 ALA 62 137 137 ALA ALA A . n A 1 63 ASN 63 138 138 ASN ASN A . n A 1 64 CYS 64 139 139 CYS CYS A . n A 1 65 TRP 65 140 140 TRP TRP A . n A 1 66 GLN 66 141 141 GLN GLN A . n A 1 67 ARG 67 142 142 ARG ARG A . n A 1 68 THR 68 143 143 THR THR A . n A 1 69 ARG 69 144 144 ARG ARG A . n A 1 70 GLN 70 145 145 GLN GLN A . n A 1 71 ARG 71 146 146 ARG ARG A . n A 1 72 ASN 72 147 147 ASN ASN A . n A 1 73 GLU 73 148 148 GLU GLU A . n A 1 74 THR 74 149 149 THR THR A . n A 1 75 GLN 75 150 150 GLN GLN A . n A 1 76 VAL 76 151 151 VAL VAL A . n # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id ZN _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 201 _pdbx_nonpoly_scheme.auth_seq_num 152 _pdbx_nonpoly_scheme.pdb_mon_id ZN _pdbx_nonpoly_scheme.auth_mon_id ZN _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 61 ? A CYS 136 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 SG ? A CYS 64 ? A CYS 139 ? 1_555 113.7 ? 2 SG ? A CYS 61 ? A CYS 136 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 SG ? A CYS 31 ? A CYS 106 ? 1_555 114.9 ? 3 SG ? A CYS 64 ? A CYS 139 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 SG ? A CYS 31 ? A CYS 106 ? 1_555 115.3 ? 4 SG ? A CYS 61 ? A CYS 136 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 SG ? A CYS 28 ? A CYS 103 ? 1_555 100.7 ? 5 SG ? A CYS 64 ? A CYS 139 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 SG ? A CYS 28 ? A CYS 103 ? 1_555 107.8 ? 6 SG ? A CYS 31 ? A CYS 106 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 SG ? A CYS 28 ? A CYS 103 ? 1_555 102.5 ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2013-05-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id E6-1 1.13 ? mM '[U-100% 13C; U-100% 15N]' 1 'sodium chloride-2' 90 ? mM ? 1 L-arginine-3 45 ? mM ? 1 L-glutamate-4 45 ? mM ? 1 DTT-5 9 ? mM ? 1 'sodium azide-6' 0.05 ? w/v ? 1 E6-7 0.9 ? mM '[U-100% 13C; U-100% 15N]' 2 'sodium chloride-8' 90 ? mM ? 2 L-arginine-9 45 ? mM ? 2 L-glutamate-10 45 ? mM ? 2 DTT-11 9 ? mM ? 2 'sodium azide-12' 0.05 ? w/v ? 2 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 2 HZ1 A LYS 117 ? ? OD2 A ASP 120 ? ? 1.53 2 3 HZ2 A LYS 117 ? ? OD2 A ASP 120 ? ? 1.54 3 3 H2 A GLY 76 ? ? OE2 A GLU 127 ? ? 1.55 4 3 HH21 A ARG 146 ? ? OE1 A GLU 148 ? ? 1.58 5 3 HG1 A THR 149 ? ? OXT A VAL 151 ? ? 1.59 6 5 HZ3 A LYS 117 ? ? OD2 A ASP 120 ? ? 1.55 7 5 HZ1 A LYS 122 ? ? OXT A VAL 151 ? ? 1.57 8 5 HH21 A ARG 81 ? ? OE2 A GLU 127 ? ? 1.60 9 6 HZ1 A LYS 117 ? ? OD2 A ASP 120 ? ? 1.54 10 6 H2 A GLY 76 ? ? OE2 A GLU 127 ? ? 1.58 11 7 HZ2 A LYS 117 ? ? OD2 A ASP 120 ? ? 1.57 12 8 HZ2 A LYS 117 ? ? OD2 A ASP 120 ? ? 1.55 13 8 HZ3 A LYS 117 ? ? OE2 A GLU 121 ? ? 1.58 14 9 HZ1 A LYS 117 ? ? OD2 A ASP 120 ? ? 1.56 15 9 HZ2 A LYS 117 ? ? OE2 A GLU 121 ? ? 1.59 16 10 HZ1 A LYS 117 ? ? OD1 A ASP 120 ? ? 1.55 17 10 HH11 A ARG 81 ? ? OE1 A GLU 127 ? ? 1.60 18 12 HZ3 A LYS 117 ? ? OD1 A ASP 120 ? ? 1.55 19 12 O A ASP 120 ? ? HZ3 A LYS 122 ? ? 1.58 20 12 HE A ARG 146 ? ? OE1 A GLU 148 ? ? 1.59 21 13 HZ3 A LYS 117 ? ? OD2 A ASP 120 ? ? 1.54 22 13 O A ASP 120 ? ? HZ2 A LYS 122 ? ? 1.57 23 14 HH21 A ARG 81 ? ? OE2 A GLU 127 ? ? 1.60 24 15 HH22 A ARG 146 ? ? OE2 A GLU 148 ? ? 1.54 25 15 HZ2 A LYS 117 ? ? OD1 A ASP 120 ? ? 1.59 26 16 HZ3 A LYS 117 ? ? OD2 A ASP 120 ? ? 1.57 27 16 HZ3 A LYS 94 ? ? OD1 A ASP 98 ? ? 1.59 28 17 HH11 A ARG 81 ? ? OE1 A GLU 127 ? ? 1.58 29 17 OE1 A GLU 121 ? ? HZ2 A LYS 123 ? ? 1.58 30 18 HZ2 A LYS 117 ? ? OD2 A ASP 120 ? ? 1.57 31 19 HZ1 A LYS 117 ? ? OD2 A ASP 120 ? ? 1.53 32 20 OE1 A GLU 121 ? ? HZ3 A LYS 123 ? ? 1.58 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 80 ? ? -58.98 105.92 2 1 GLN A 150 ? ? -140.94 -46.00 3 4 HIS A 78 ? ? -142.06 -50.30 4 4 LYS A 122 ? ? 65.71 60.98 5 4 THR A 149 ? ? -140.47 30.21 6 5 LYS A 122 ? ? 66.27 62.26 7 5 ARG A 144 ? ? -95.88 30.35 8 7 THR A 149 ? ? -79.57 34.52 9 8 LYS A 93 ? ? 55.85 16.39 10 8 THR A 143 ? ? -82.91 34.07 11 8 GLU A 148 ? ? -69.41 65.77 12 9 LYS A 122 ? ? 64.24 60.29 13 10 SER A 80 ? ? -59.56 106.78 14 12 LYS A 122 ? ? 60.63 60.43 15 14 LYS A 122 ? ? 63.05 61.41 16 15 HIS A 104 ? ? -80.42 31.66 17 15 LYS A 122 ? ? 64.05 60.94 18 15 GLN A 150 ? ? -140.07 21.30 19 16 GLU A 148 ? ? -69.64 88.05 20 18 SER A 77 ? ? -82.90 41.13 21 18 GLN A 150 ? ? -125.32 -51.43 22 19 MET A 79 ? ? -140.40 -46.16 23 19 GLU A 148 ? ? -68.04 86.11 24 20 SER A 77 ? ? -81.61 33.61 25 20 LYS A 93 ? ? 55.33 15.60 26 20 THR A 143 ? ? -84.58 37.54 27 20 GLU A 148 ? ? -71.31 30.09 28 20 THR A 149 ? ? -140.48 -4.49 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'ZINC ION' _pdbx_entity_nonpoly.comp_id ZN #