HEADER STRUCTURAL PROTEIN 25-JAN-13 2M3T TITLE SOLUTION-STATE NMR STRUCTURE OF WILD-TYPE HUMAN GAMMA(S)-CRYSTALLIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-CRYSTALLIN S; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GAMMA-S-CRYSTALLIN, GAMMA-CRYSTALLIN S; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 VARIANT: WILD-TYPE; SOURCE 6 GENE: CRYGS, GRYG8; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: ROSETTA (DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET28(A) KEYWDS GAMMA-S, EYE LENS, AGGREGATION, CRYSTALLIN, CATARACT, CRYGS, KEYWDS 2 STRUCTURAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 21 MDLTYP MINIMIZED AVERAGE AUTHOR W.D.BRUBAKER,R.W.MARTIN REVDAT 3 01-MAY-24 2M3T 1 REMARK SEQADV REVDAT 2 25-DEC-13 2M3T 1 JRNL REVDAT 1 13-NOV-13 2M3T 0 JRNL AUTH C.N.KINGSLEY,W.D.BRUBAKER,S.MARKOVIC,A.DIEHL,A.J.BRINDLEY, JRNL AUTH 2 H.OSCHKINAT,R.W.MARTIN JRNL TITL PREFERENTIAL AND SPECIFIC BINDING OF HUMAN ALPHA JRNL TITL 2 B-CRYSTALLIN TO A CATARACT-RELATED VARIANT OF GAMMA JRNL TITL 3 S-CRYSTALLIN. JRNL REF STRUCTURE V. 21 2221 2013 JRNL REFN ISSN 0969-2126 JRNL PMID 24183572 JRNL DOI 10.1016/J.STR.2013.09.017 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH 2.30 REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2M3T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JAN-13. REMARK 100 THE DEPOSITION ID IS D_1000103173. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 295; 305 REMARK 210 PH : 4.5; 4.5 REMARK 210 IONIC STRENGTH : NULL; NULL REMARK 210 PRESSURE : AMBIENT; AMBIENT REMARK 210 SAMPLE CONTENTS : 10 MM ACETIC ACID, 2 MM REMARK 210 2,2',3,3'-D4 TSP, 0.05 % SODIUM REMARK 210 AZIDE, 7.5 % DIOTPC, 2.5 % REMARK 210 DIOHPC, 2 MM [U-15N] (GAMMA)S-WT, REMARK 210 90% H2O/10% D2O; 10 MM ACETIC REMARK 210 ACID, 2 MM 2,2',3,3'-D4 TSP, REMARK 210 0.05 % SODIUM AZIDE, 2.11 MM [U- REMARK 210 13C; U-15N] (GAMMA)S-WT, 90% H2O/ REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 3D HNCACB; 3D CBCA(CO) REMARK 210 NH; 3D HNCO; 3D HCCH-TOCSY; 3D REMARK 210 HCCH-COSY; 3D 1H-15N NOESY; 3D REMARK 210 1H-13C NOESY ALIPHATIC; 3D 1H- REMARK 210 13C NOESY AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR NIH 2.30, VNMR, SPARKY, REMARK 210 NMRPIPE, CCPNMR ANALYSIS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 21 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H PHE A 16 HG SER A 39 1.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 -118.01 -95.17 REMARK 500 1 LYS A 3 29.67 34.05 REMARK 500 1 THR A 4 -20.30 161.39 REMARK 500 1 ASN A 15 26.11 49.77 REMARK 500 1 ASP A 26 156.27 -39.90 REMARK 500 1 SER A 39 128.67 39.04 REMARK 500 1 GLU A 51 -39.59 -36.20 REMARK 500 1 ASN A 54 -4.29 79.80 REMARK 500 1 PHE A 55 51.01 84.61 REMARK 500 1 GLN A 71 -13.43 -46.00 REMARK 500 1 MET A 74 23.74 85.00 REMARK 500 1 ASN A 77 159.68 106.96 REMARK 500 1 ASP A 78 57.35 -91.72 REMARK 500 1 SER A 81 -162.54 -101.20 REMARK 500 1 SER A 82 -168.33 -50.27 REMARK 500 1 SER A 90 -15.79 -170.85 REMARK 500 1 GLN A 93 -102.92 34.43 REMARK 500 1 TYR A 94 114.39 -162.49 REMARK 500 1 PHE A 104 78.89 53.46 REMARK 500 1 THR A 112 38.77 -93.22 REMARK 500 1 HIS A 123 7.51 55.25 REMARK 500 1 VAL A 132 98.93 56.86 REMARK 500 1 TYR A 145 33.25 70.92 REMARK 500 1 GLU A 156 159.30 177.97 REMARK 500 1 SER A 167 154.17 169.39 REMARK 500 1 VAL A 170 -147.71 -102.74 REMARK 500 1 GLN A 171 -133.40 -156.67 REMARK 500 1 SER A 172 -153.02 -91.95 REMARK 500 2 THR A 4 -59.88 -142.58 REMARK 500 2 ASN A 15 24.26 46.41 REMARK 500 2 ARG A 19 175.60 -53.39 REMARK 500 2 ASP A 26 156.29 -36.27 REMARK 500 2 SER A 39 129.20 34.95 REMARK 500 2 GLU A 51 -35.48 -35.74 REMARK 500 2 ASN A 54 -4.90 85.70 REMARK 500 2 PHE A 55 62.95 85.64 REMARK 500 2 GLN A 71 -10.71 -43.28 REMARK 500 2 MET A 74 24.73 83.56 REMARK 500 2 ASN A 77 167.65 110.21 REMARK 500 2 SER A 81 -162.45 -111.81 REMARK 500 2 SER A 82 -179.25 -45.25 REMARK 500 2 SER A 90 -13.96 -173.27 REMARK 500 2 GLN A 93 -107.66 35.46 REMARK 500 2 ASP A 103 35.70 -154.27 REMARK 500 2 THR A 112 44.08 -94.09 REMARK 500 2 HIS A 123 14.02 50.60 REMARK 500 2 LYS A 131 53.00 -94.39 REMARK 500 2 ASP A 153 -143.94 -83.47 REMARK 500 2 LYS A 154 103.89 67.49 REMARK 500 2 LYS A 155 -166.27 42.87 REMARK 500 REMARK 500 THIS ENTRY HAS 631 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2M3U RELATED DB: PDB REMARK 900 POINT VARIANT (G18V) OF HUMAN GAMMA-S CRYSTALLIN THAT CAUSES YOUTH- REMARK 900 ONSET CATARACT. REMARK 900 RELATED ID: 17576 RELATED DB: BMRB DBREF 2M3T A 2 178 UNP P22914 CRBS_HUMAN 2 178 SEQADV 2M3T GLY A 1 UNP P22914 EXPRESSION TAG SEQRES 1 A 178 GLY SER LYS THR GLY THR LYS ILE THR PHE TYR GLU ASP SEQRES 2 A 178 LYS ASN PHE GLN GLY ARG ARG TYR ASP CYS ASP CYS ASP SEQRES 3 A 178 CYS ALA ASP PHE HIS THR TYR LEU SER ARG CYS ASN SER SEQRES 4 A 178 ILE LYS VAL GLU GLY GLY THR TRP ALA VAL TYR GLU ARG SEQRES 5 A 178 PRO ASN PHE ALA GLY TYR MET TYR ILE LEU PRO GLN GLY SEQRES 6 A 178 GLU TYR PRO GLU TYR GLN ARG TRP MET GLY LEU ASN ASP SEQRES 7 A 178 ARG LEU SER SER CYS ARG ALA VAL HIS LEU PRO SER GLY SEQRES 8 A 178 GLY GLN TYR LYS ILE GLN ILE PHE GLU LYS GLY ASP PHE SEQRES 9 A 178 SER GLY GLN MET TYR GLU THR THR GLU ASP CYS PRO SER SEQRES 10 A 178 ILE MET GLU GLN PHE HIS MET ARG GLU ILE HIS SER CYS SEQRES 11 A 178 LYS VAL LEU GLU GLY VAL TRP ILE PHE TYR GLU LEU PRO SEQRES 12 A 178 ASN TYR ARG GLY ARG GLN TYR LEU LEU ASP LYS LYS GLU SEQRES 13 A 178 TYR ARG LYS PRO ILE ASP TRP GLY ALA ALA SER PRO ALA SEQRES 14 A 178 VAL GLN SER PHE ARG ARG ILE VAL GLU HELIX 1 1 GLU A 69 MET A 74 5 6 HELIX 2 2 SER A 117 HIS A 123 1 7 SHEET 1 A 4 ARG A 20 CYS A 23 0 SHEET 2 A 4 ILE A 8 TYR A 11 -1 N ILE A 8 O CYS A 23 SHEET 3 A 4 ASN A 38 LYS A 41 -1 O ASN A 38 N TYR A 11 SHEET 4 A 4 GLU A 66 TYR A 67 -1 O TYR A 67 N ILE A 40 SHEET 1 B 3 ALA A 56 LEU A 62 0 SHEET 2 B 3 TRP A 47 ARG A 52 -1 N VAL A 49 O TYR A 60 SHEET 3 B 3 CYS A 83 ALA A 85 -1 O ARG A 84 N ALA A 48 SHEET 1 C 3 SER A 105 THR A 111 0 SHEET 2 C 3 ILE A 96 LYS A 101 -1 N LYS A 101 O SER A 105 SHEET 3 C 3 SER A 129 LYS A 131 -1 O SER A 129 N PHE A 99 SHEET 1 D 2 PHE A 139 LEU A 142 0 SHEET 2 D 2 ARG A 146 TYR A 150 -1 O TYR A 150 N PHE A 139 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1