HEADER TRANSPORT PROTEIN 15-MAY-13 2M8C TITLE THE SOLUTION NMR STRUCTURE OF E. COLI APO-HISJ COMPND MOL_ID: 1; COMPND 2 MOLECULE: CATIONIC AMINO ACID ABC TRANSPORTER, PERIPLASMIC BINDING COMPND 3 PROTEIN; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: HISTIDINE/LYSINE/ARGININE/ORNITHINE TRANSPORTER SUBUNIT; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 536056; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: HISJ, ECDH1_1347, ECDH1ME8569_2247; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET-15 KEYWDS PERIPLASMIC BINDING PROTEIN, HISJ, APO, TRANSPORT PROTEIN EXPDTA SOLUTION NMR NUMMDL 30 AUTHOR B.C.H.CHU,H.J.VOGEL REVDAT 3 14-JUN-23 2M8C 1 REMARK SEQADV REVDAT 2 20-NOV-13 2M8C 1 JRNL REVDAT 1 02-OCT-13 2M8C 0 JRNL AUTH B.C.CHU,T.DEWOLF,H.J.VOGEL JRNL TITL ROLE OF THE TWO STRUCTURAL DOMAINS FROM THE PERIPLASMIC JRNL TITL 2 ESCHERICHIA COLI HISTIDINE-BINDING PROTEIN HISJ. JRNL REF J.BIOL.CHEM. V. 288 31409 2013 JRNL REFN ISSN 0021-9258 JRNL PMID 24036119 JRNL DOI 10.1074/JBC.M113.490441 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRDRAW, X-PLOR NIH REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRDRAW) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2M8C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000103336. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM [U-13C; U-15N; U-2H] APO REMARK 210 -HISJ, 50 MM SODIUM PHOSPHATE, REMARK 210 10 % D2O, 90 % H2O, 0.5 MM DSS, REMARK 210 90% H2O/10% D2O; 1 MM [U-13C; U- REMARK 210 15N] APO-HISJ, 50 MM SODIUM REMARK 210 PHOSPHATE, 10 % D2O, 90 % H2O, REMARK 210 0.5 MM DSS, 90% H2O/10% D2O; 1 REMARK 210 MM [U-13C; U-15N] APO-HISJ, 50 REMARK 210 MM SODIUM PHOSPHATE, 100 % D2O, REMARK 210 0.5 MM DSS, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-15N NOESY; 3D 1H-13C REMARK 210 NOESY; 3D HNCACB; 3D CBCA(CO)NH; REMARK 210 3D HNCO; 2D 1H-15N HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY, X-PLOR NIH REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 30 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-30 REMARK 465 RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 GLY A 2 REMARK 465 MET A 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG1 THR A 87 H ASP A 88 1.30 REMARK 500 HG SER A 72 H SER A 73 1.31 REMARK 500 O GLN A 125 H GLY A 129 1.56 REMARK 500 O ALA A 18 O GLU A 21 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 16 -19.65 -141.32 REMARK 500 1 ALA A 18 -61.09 -28.79 REMARK 500 1 GLU A 21 -154.56 -149.28 REMARK 500 1 SER A 22 177.66 161.66 REMARK 500 1 ASN A 53 129.88 175.37 REMARK 500 1 LYS A 65 12.12 55.96 REMARK 500 1 LEU A 74 123.91 -36.40 REMARK 500 1 THR A 87 -152.81 -164.09 REMARK 500 1 ASP A 88 19.90 41.86 REMARK 500 1 LYS A 89 121.07 -30.63 REMARK 500 1 ALA A 93 67.96 -103.87 REMARK 500 1 ASP A 94 -104.89 -85.64 REMARK 500 1 PRO A 107 89.38 -59.76 REMARK 500 1 ASN A 130 -14.19 -45.82 REMARK 500 1 PHE A 172 -71.24 -41.34 REMARK 500 1 LYS A 174 -3.34 -59.70 REMARK 500 1 LYS A 182 99.20 -176.58 REMARK 500 1 SER A 187 -108.64 -125.08 REMARK 500 1 LYS A 189 155.89 154.19 REMARK 500 1 ALA A 212 -77.37 -73.57 REMARK 500 1 LEU A 213 -45.49 -29.14 REMARK 500 2 THR A 16 -19.53 -141.67 REMARK 500 2 ALA A 18 -61.28 -28.64 REMARK 500 2 GLU A 21 -155.28 -149.34 REMARK 500 2 SER A 22 177.89 161.05 REMARK 500 2 ASN A 53 131.43 175.68 REMARK 500 2 LYS A 65 11.68 56.35 REMARK 500 2 LEU A 74 123.58 -38.27 REMARK 500 2 THR A 87 -151.95 -164.40 REMARK 500 2 ASP A 88 19.52 43.23 REMARK 500 2 LYS A 89 120.18 -28.83 REMARK 500 2 ALA A 93 69.39 -103.59 REMARK 500 2 ASP A 94 -105.19 -85.90 REMARK 500 2 PRO A 107 91.64 -59.65 REMARK 500 2 THR A 108 144.35 -170.74 REMARK 500 2 ASN A 130 -14.46 -45.67 REMARK 500 2 PHE A 172 -70.89 -40.74 REMARK 500 2 LYS A 174 -3.96 -59.62 REMARK 500 2 PRO A 176 -15.21 -43.95 REMARK 500 2 LYS A 182 99.57 -177.16 REMARK 500 2 SER A 187 -108.38 -125.25 REMARK 500 2 LYS A 189 155.90 154.07 REMARK 500 2 ALA A 212 -77.02 -73.60 REMARK 500 2 LEU A 213 -45.12 -29.15 REMARK 500 3 THR A 16 -20.04 -141.92 REMARK 500 3 ALA A 18 -61.40 -28.81 REMARK 500 3 GLU A 21 -153.80 -149.64 REMARK 500 3 SER A 22 177.43 161.95 REMARK 500 3 ASN A 53 131.68 176.53 REMARK 500 3 LYS A 65 11.99 57.25 REMARK 500 REMARK 500 THIS ENTRY HAS 665 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 19242 RELATED DB: BMRB DBREF 2M8C A 4 241 UNP C9QQM5 C9QQM5_ECOD1 23 260 SEQADV 2M8C GLY A 1 UNP C9QQM5 EXPRESSION TAG SEQADV 2M8C GLY A 2 UNP C9QQM5 EXPRESSION TAG SEQADV 2M8C MET A 3 UNP C9QQM5 EXPRESSION TAG SEQRES 1 A 241 GLY GLY MET ALA ILE PRO GLN ASN ILE ARG ILE GLY THR SEQRES 2 A 241 ASP PRO THR TYR ALA PRO PHE GLU SER LYS ASN SER GLN SEQRES 3 A 241 GLY GLU LEU VAL GLY PHE ASP ILE ASP LEU ALA LYS GLU SEQRES 4 A 241 LEU CYS LYS ARG ILE ASN THR GLN CYS THR PHE VAL GLU SEQRES 5 A 241 ASN PRO LEU ASP ALA LEU ILE PRO SER LEU LYS ALA LYS SEQRES 6 A 241 LYS ILE ASP ALA ILE MET SER SER LEU SER ILE THR GLU SEQRES 7 A 241 LYS ARG GLN GLN GLU ILE ALA PHE THR ASP LYS LEU TYR SEQRES 8 A 241 ALA ALA ASP SER ARG LEU VAL VAL ALA LYS ASN SER ASP SEQRES 9 A 241 ILE GLN PRO THR VAL GLU SER LEU LYS GLY LYS ARG VAL SEQRES 10 A 241 GLY VAL LEU GLN GLY THR THR GLN GLU THR PHE GLY ASN SEQRES 11 A 241 GLU HIS TRP ALA PRO LYS GLY ILE GLU ILE VAL SER TYR SEQRES 12 A 241 GLN GLY GLN ASP ASN ILE TYR SER ASP LEU THR ALA GLY SEQRES 13 A 241 ARG ILE ASP ALA ALA PHE GLN ASP GLU VAL ALA ALA SER SEQRES 14 A 241 GLU GLY PHE LEU LYS GLN PRO VAL GLY LYS ASP TYR LYS SEQRES 15 A 241 PHE GLY GLY PRO SER VAL LYS ASP GLU LYS LEU PHE GLY SEQRES 16 A 241 VAL GLY THR GLY MET GLY LEU ARG LYS GLU ASP ASN GLU SEQRES 17 A 241 LEU ARG GLU ALA LEU ASN LYS ALA PHE ALA GLU MET ARG SEQRES 18 A 241 ALA ASP GLY THR TYR GLU LYS LEU ALA LYS LYS TYR PHE SEQRES 19 A 241 ASP PHE ASP VAL TYR GLY GLY HELIX 1 1 PHE A 32 ASN A 45 1 14 HELIX 2 2 PRO A 54 ALA A 64 1 11 HELIX 3 3 THR A 77 ILE A 84 1 8 HELIX 4 4 THR A 108 LYS A 113 1 6 HELIX 5 5 THR A 123 TRP A 133 1 11 HELIX 6 6 GLY A 145 GLY A 156 1 12 HELIX 7 7 ASP A 164 PHE A 172 1 9 HELIX 8 8 GLN A 175 TYR A 181 1 7 HELIX 9 9 ASP A 190 GLY A 195 1 6 HELIX 10 10 ASP A 206 ASP A 223 1 18 HELIX 11 11 GLY A 224 PHE A 234 1 11 SHEET 1 A 3 GLN A 47 VAL A 51 0 SHEET 2 A 3 ASN A 8 GLY A 12 1 N ILE A 11 O THR A 49 SHEET 3 A 3 ALA A 69 ILE A 70 1 N ALA A 69 O ARG A 10 SHEET 1 B 2 GLU A 21 LYS A 23 0 SHEET 2 B 2 LEU A 29 GLY A 31 -1 O VAL A 30 N SER A 22 SHEET 1 C 2 SER A 75 ILE A 76 0 SHEET 2 C 2 GLY A 197 THR A 198 -1 O GLY A 197 N ILE A 76 SHEET 1 D 2 ALA A 85 THR A 87 0 SHEET 2 D 2 MET A 200 LEU A 202 -1 O LEU A 202 N ALA A 85 SHEET 1 E 3 GLU A 139 TYR A 143 0 SHEET 2 E 3 ARG A 116 LEU A 120 1 N VAL A 119 O VAL A 141 SHEET 3 E 3 ALA A 160 ALA A 161 1 O ALA A 160 N GLY A 118 SSBOND 1 CYS A 41 CYS A 48 1555 1555 2.02 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1