data_2M8F # _entry.id 2M8F # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2M8F pdb_00002m8f 10.2210/pdb2m8f/pdb RCSB RCSB103339 ? ? BMRB 19250 ? ? WWPDB D_1000103339 ? ? # _pdbx_database_related.db_id 19250 _pdbx_database_related.db_name BMRB _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2M8F _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-05-18 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Maksimov, M.O.' 1 'Link, A.' 2 # _citation.id primary _citation.title 'Discovery and characterization of an isopeptidase that linearizes lasso peptides.' _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 135 _citation.page_first 12038 _citation.page_last 12047 _citation.year 2013 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23862624 _citation.pdbx_database_id_DOI 10.1021/ja4054256 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Maksimov, M.O.' 1 ? primary 'Link, A.J.' 2 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description astexin3 _entity.formula_weight 2542.755 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'UNP residues 26-49' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GPTPMVGLDSVSGQYWDQHAPLAD _entity_poly.pdbx_seq_one_letter_code_can GPTPMVGLDSVSGQYWDQHAPLAD _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 THR n 1 4 PRO n 1 5 MET n 1 6 VAL n 1 7 GLY n 1 8 LEU n 1 9 ASP n 1 10 SER n 1 11 VAL n 1 12 SER n 1 13 GLY n 1 14 GLN n 1 15 TYR n 1 16 TRP n 1 17 ASP n 1 18 GLN n 1 19 HIS n 1 20 ALA n 1 21 PRO n 1 22 LEU n 1 23 ALA n 1 24 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Astex_2447 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Asticcacaulis excentricus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 573065 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pASK-75 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code E8RUP8_ASTEC _struct_ref.pdbx_db_accession E8RUP8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code GPTPMVGLDSVSGQYWDQHAPLAD _struct_ref.pdbx_align_begin 26 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2M8F _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 24 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession E8RUP8 _struct_ref_seq.db_align_beg 26 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 49 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 24 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D TOCSY' 1 2 1 '2D NOESY' 1 3 1 '2D COSY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pH ? _pdbx_nmr_exptl_sample_conditions.pressure ? _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 295 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents '16.25 mg/mL astexin3, DMSO' _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system DMSO # _pdbx_nmr_spectrometer.field_strength 500 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model 'AVANCE III' _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'BRUKER AVANCE-III' # _pdbx_nmr_refine.entry_id 2M8F _pdbx_nmr_refine.method 'simulated annealing, torsion angle dynamics' _pdbx_nmr_refine.details ;An ensemble of 200 structures was generated by simulated annealing under a set of 218 NOE-derived upper distance restraints and 11 3JHHA coupling-derived phi angle restraints. 20 lowest energy structures were refined further by energy minimization using TINKER 6.0. ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 2M8F _pdbx_nmr_details.text 'This structure was determined using standard 2D homonuclear techniques.' # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2M8F _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2M8F _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA 6.0 1 Ponder processing TopSpin 2.1 2 'MestreLab Research, S.S.L., Santiago de Compostella, Spain' processing MESTRENOVA 7.0.3 3 Ponder refinement Tinker 6.0 4 'Guntert, Mumenthaler and Wuthrich' refinement CYANA 6.0 5 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2M8F _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2M8F _struct.title 'Structure of lasso peptide astexin3' _struct.pdbx_model_details 'lowest energy, model1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2M8F _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' _struct_keywords.text 'sidechain-to-backbone link, UNKNOWN FUNCTION' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag one _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id GLY _struct_conn.ptnr1_label_seq_id 1 _struct_conn.ptnr1_label_atom_id N _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id ASP _struct_conn.ptnr2_label_seq_id 9 _struct_conn.ptnr2_label_atom_id CG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id GLY _struct_conn.ptnr1_auth_seq_id 1 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id ASP _struct_conn.ptnr2_auth_seq_id 9 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.341 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 2M8F _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 THR 3 3 3 THR THR A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 MET 5 5 5 MET MET A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 ASP 9 9 9 ASP ASP A . n A 1 10 SER 10 10 10 SER SER A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 TYR 15 15 15 TYR TYR A . n A 1 16 TRP 16 16 16 TRP TRP A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 HIS 19 19 19 HIS HIS A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 PRO 21 21 21 PRO PRO A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ASP 24 24 24 ASP ASP A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-07-31 2 'Structure model' 1 1 2013-09-04 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' pdbx_nmr_software 4 3 'Structure model' pdbx_nmr_spectrometer 5 3 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 3 'Structure model' '_pdbx_nmr_software.name' 5 3 'Structure model' '_pdbx_nmr_spectrometer.model' 6 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _pdbx_nmr_exptl_sample.component astexin3-1 _pdbx_nmr_exptl_sample.concentration 16.25 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units mg/mL _pdbx_nmr_exptl_sample.isotopic_labeling ? _pdbx_nmr_exptl_sample.solution_id 1 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 10 _pdbx_validate_close_contact.auth_atom_id_1 HG _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 SER _pdbx_validate_close_contact.auth_seq_id_1 12 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OD2 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 ASP _pdbx_validate_close_contact.auth_seq_id_2 17 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.60 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 2 CB A ASP 9 ? ? CG A ASP 9 ? ? OD1 A ASP 9 ? ? 111.96 118.30 -6.34 0.90 N 2 3 CA A THR 3 ? ? CB A THR 3 ? ? CG2 A THR 3 ? ? 121.51 112.40 9.11 1.40 N 3 3 CB A ASP 9 ? ? CG A ASP 9 ? ? OD1 A ASP 9 ? ? 112.43 118.30 -5.87 0.90 N 4 5 CB A ASP 9 ? ? CG A ASP 9 ? ? OD1 A ASP 9 ? ? 112.37 118.30 -5.93 0.90 N 5 7 CA A THR 3 ? ? CB A THR 3 ? ? CG2 A THR 3 ? ? 120.93 112.40 8.53 1.40 N 6 10 CB A ASP 9 ? ? CG A ASP 9 ? ? OD1 A ASP 9 ? ? 112.21 118.30 -6.09 0.90 N 7 11 CB A ASP 9 ? ? CG A ASP 9 ? ? OD1 A ASP 9 ? ? 111.67 118.30 -6.63 0.90 N 8 14 CB A ASP 9 ? ? CG A ASP 9 ? ? OD1 A ASP 9 ? ? 112.29 118.30 -6.01 0.90 N 9 15 CB A ASP 9 ? ? CG A ASP 9 ? ? OD1 A ASP 9 ? ? 111.82 118.30 -6.48 0.90 N 10 17 CA A THR 3 ? ? CB A THR 3 ? ? CG2 A THR 3 ? ? 121.44 112.40 9.04 1.40 N 11 20 CB A ASP 9 ? ? CG A ASP 9 ? ? OD1 A ASP 9 ? ? 112.81 118.30 -5.49 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MET A 5 ? ? -132.42 -127.78 2 1 LEU A 8 ? ? 70.21 -50.59 3 1 ASP A 9 ? ? -56.81 30.70 4 1 SER A 12 ? ? -141.74 -5.65 5 1 GLN A 14 ? ? -114.09 -160.36 6 1 TRP A 16 ? ? 127.27 165.07 7 1 ASP A 17 ? ? -151.97 2.63 8 1 HIS A 19 ? ? -18.17 134.57 9 1 ALA A 20 ? ? 135.69 147.21 10 1 PRO A 21 ? ? -72.76 31.77 11 1 ALA A 23 ? ? -150.23 -12.76 12 2 LEU A 8 ? ? 60.78 -43.08 13 2 VAL A 11 ? ? -142.06 -63.53 14 2 SER A 12 ? ? -170.80 79.80 15 2 GLN A 14 ? ? -143.02 -93.93 16 2 TYR A 15 ? ? -176.49 81.09 17 2 TRP A 16 ? ? 86.81 77.91 18 2 ASP A 17 ? ? -63.23 13.32 19 2 HIS A 19 ? ? -69.29 23.97 20 2 ALA A 23 ? ? -153.28 1.86 21 3 LEU A 8 ? ? 64.14 -45.59 22 3 VAL A 11 ? ? -140.18 -59.16 23 3 SER A 12 ? ? -178.22 87.87 24 3 GLN A 14 ? ? -142.58 -100.12 25 3 TYR A 15 ? ? -165.20 88.46 26 3 TRP A 16 ? ? 80.89 110.49 27 3 HIS A 19 ? ? -60.54 16.42 28 3 LEU A 22 ? ? -172.11 -157.14 29 3 ALA A 23 ? ? -142.27 -72.32 30 4 PRO A 2 ? ? -110.46 56.14 31 4 MET A 5 ? ? -125.68 -167.59 32 4 LEU A 8 ? ? 69.25 -43.52 33 4 ASP A 9 ? ? -38.47 110.58 34 4 SER A 10 ? ? -61.75 1.72 35 4 SER A 12 ? ? -148.53 11.41 36 4 GLN A 14 ? ? 35.85 -148.35 37 4 TYR A 15 ? ? -101.74 44.16 38 4 TRP A 16 ? ? 61.37 168.54 39 4 HIS A 19 ? ? 37.33 61.43 40 4 PRO A 21 ? ? -72.77 47.60 41 4 ALA A 23 ? ? -173.38 9.88 42 5 LEU A 8 ? ? 63.51 -42.27 43 5 VAL A 11 ? ? -138.79 -59.60 44 5 SER A 12 ? ? -175.95 92.51 45 5 GLN A 14 ? ? -145.64 -90.92 46 5 TYR A 15 ? ? -172.30 99.50 47 5 TRP A 16 ? ? 66.95 79.24 48 5 ASP A 17 ? ? -59.33 5.48 49 5 HIS A 19 ? ? -66.23 23.03 50 5 ALA A 23 ? ? -148.77 -0.13 51 6 PRO A 4 ? ? -80.81 30.02 52 6 MET A 5 ? ? -131.66 -159.52 53 6 LEU A 8 ? ? 69.24 -56.96 54 6 ASP A 9 ? ? -26.88 102.26 55 6 SER A 10 ? ? -59.08 -4.53 56 6 SER A 12 ? ? -156.15 10.82 57 6 GLN A 14 ? ? 35.62 -150.60 58 6 TYR A 15 ? ? -105.80 60.74 59 6 TRP A 16 ? ? 61.82 168.47 60 6 ASP A 17 ? ? -152.22 -4.72 61 6 HIS A 19 ? ? 46.30 77.49 62 6 PRO A 21 ? ? -68.97 18.52 63 6 ALA A 23 ? ? -158.97 23.28 64 7 LEU A 8 ? ? 66.15 -61.46 65 7 SER A 10 ? ? 59.05 -22.01 66 7 VAL A 11 ? ? -133.95 -47.53 67 7 SER A 12 ? ? -65.78 2.98 68 7 GLN A 14 ? ? -142.82 -86.01 69 7 TYR A 15 ? ? -158.72 63.09 70 7 TRP A 16 ? ? 96.07 131.75 71 7 HIS A 19 ? ? -71.50 44.53 72 7 ALA A 23 ? ? -148.86 -0.80 73 8 LEU A 8 ? ? 60.80 -60.78 74 8 SER A 10 ? ? 59.03 -15.85 75 8 VAL A 11 ? ? -140.29 -59.09 76 8 GLN A 14 ? ? -138.77 -97.08 77 8 TYR A 15 ? ? -158.24 56.10 78 8 TRP A 16 ? ? 99.13 110.65 79 8 HIS A 19 ? ? -60.80 28.06 80 8 ALA A 23 ? ? -152.30 1.26 81 9 LEU A 8 ? ? 61.15 -58.37 82 9 SER A 10 ? ? 61.97 -30.37 83 9 VAL A 11 ? ? -136.10 -36.80 84 9 GLN A 14 ? ? -143.16 -90.13 85 9 TYR A 15 ? ? -153.11 74.06 86 9 TRP A 16 ? ? 81.07 89.30 87 9 ASP A 17 ? ? -66.99 6.07 88 9 HIS A 19 ? ? -66.17 37.05 89 9 ALA A 23 ? ? -144.41 -42.75 90 10 LEU A 8 ? ? 64.52 -55.49 91 10 SER A 10 ? ? 51.21 -11.86 92 10 VAL A 11 ? ? -141.16 -53.89 93 10 TRP A 16 ? ? 63.93 92.18 94 10 HIS A 19 ? ? -64.30 27.05 95 10 ALA A 23 ? ? -151.03 -1.72 96 11 LEU A 8 ? ? 65.78 -67.61 97 11 SER A 10 ? ? 58.09 -10.92 98 11 VAL A 11 ? ? -136.90 -48.25 99 11 TRP A 16 ? ? 72.83 153.66 100 11 ASP A 17 ? ? -154.70 5.68 101 11 HIS A 19 ? ? -66.00 30.17 102 11 ALA A 23 ? ? -141.78 -22.10 103 12 LEU A 8 ? ? 60.06 -59.11 104 12 SER A 10 ? ? 58.81 -15.63 105 12 VAL A 11 ? ? -141.97 -55.55 106 12 GLN A 14 ? ? -139.55 -99.26 107 12 TYR A 15 ? ? -158.25 68.24 108 12 TRP A 16 ? ? 84.33 105.14 109 12 HIS A 19 ? ? -62.78 27.49 110 12 ALA A 23 ? ? -151.91 -2.66 111 13 LEU A 8 ? ? 65.22 -57.72 112 13 SER A 10 ? ? 57.96 -9.78 113 13 VAL A 11 ? ? -139.57 -53.04 114 13 TRP A 16 ? ? 70.79 120.13 115 13 HIS A 19 ? ? -51.36 31.22 116 13 ALA A 23 ? ? -154.56 -2.83 117 14 LEU A 8 ? ? 58.97 -50.71 118 14 VAL A 11 ? ? -139.35 -62.51 119 14 SER A 12 ? ? -179.37 91.84 120 14 GLN A 14 ? ? -139.41 -90.63 121 14 TYR A 15 ? ? -167.48 106.57 122 14 TRP A 16 ? ? 62.61 77.45 123 14 ASP A 17 ? ? -61.89 22.69 124 14 HIS A 19 ? ? -68.98 29.13 125 14 ALA A 23 ? ? -147.47 -59.34 126 15 LEU A 8 ? ? 60.42 -63.94 127 15 SER A 10 ? ? 53.19 -10.35 128 15 VAL A 11 ? ? -138.98 -50.17 129 15 TRP A 16 ? ? 67.86 99.05 130 15 HIS A 19 ? ? -49.79 17.92 131 15 ALA A 23 ? ? -145.21 -70.99 132 16 LEU A 8 ? ? 59.95 -35.61 133 16 ASP A 9 ? ? -69.08 37.51 134 16 SER A 10 ? ? -60.79 0.28 135 16 VAL A 11 ? ? -136.04 -50.18 136 16 GLN A 14 ? ? -142.80 -109.87 137 16 TRP A 16 ? ? 50.93 77.30 138 16 ASP A 17 ? ? -59.40 4.46 139 16 HIS A 19 ? ? -66.19 28.86 140 16 ALA A 23 ? ? -152.64 -1.81 141 17 LEU A 8 ? ? 65.23 -65.59 142 17 SER A 10 ? ? 59.39 -18.93 143 17 VAL A 11 ? ? -136.63 -60.25 144 17 SER A 12 ? ? -76.61 27.78 145 17 GLN A 14 ? ? -144.80 -88.79 146 17 TYR A 15 ? ? -155.54 56.81 147 17 TRP A 16 ? ? 98.71 129.60 148 17 HIS A 19 ? ? -65.56 23.61 149 17 ALA A 23 ? ? -146.35 -4.61 150 18 LEU A 8 ? ? 57.55 -60.92 151 18 SER A 10 ? ? 59.23 -15.66 152 18 VAL A 11 ? ? -140.43 -58.51 153 18 GLN A 14 ? ? -140.96 -91.06 154 18 TYR A 15 ? ? -158.88 79.04 155 18 TRP A 16 ? ? 77.57 96.36 156 18 ASP A 17 ? ? -69.92 2.60 157 18 HIS A 19 ? ? -67.81 28.44 158 18 ALA A 23 ? ? -150.89 -3.05 159 19 MET A 5 ? ? -105.59 -166.58 160 19 LEU A 8 ? ? 52.10 -50.39 161 19 SER A 10 ? ? 52.99 -4.16 162 19 VAL A 11 ? ? -142.65 -52.34 163 19 GLN A 14 ? ? -142.31 -95.41 164 19 TYR A 15 ? ? -159.28 58.99 165 19 TRP A 16 ? ? 99.73 105.82 166 19 HIS A 19 ? ? -68.48 25.14 167 19 ALA A 23 ? ? -152.21 -1.63 168 20 LEU A 8 ? ? 62.49 -64.23 169 20 SER A 10 ? ? 57.20 -11.08 170 20 VAL A 11 ? ? -134.86 -51.11 171 20 TRP A 16 ? ? 72.80 88.98 172 20 ASP A 17 ? ? -63.63 1.58 173 20 HIS A 19 ? ? -67.13 29.11 174 20 ALA A 23 ? ? -150.67 -2.36 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 TRP A 16 ? ? ASP A 17 ? ? -145.68 2 1 ALA A 23 ? ? ASP A 24 ? ? 122.13 3 2 GLN A 14 ? ? TYR A 15 ? ? -142.05 4 4 GLY A 13 ? ? GLN A 14 ? ? 145.51 5 4 ASP A 17 ? ? GLN A 18 ? ? -131.45 6 4 HIS A 19 ? ? ALA A 20 ? ? 144.21 7 6 GLY A 13 ? ? GLN A 14 ? ? 149.58 8 6 TRP A 16 ? ? ASP A 17 ? ? -146.47 9 6 ASP A 17 ? ? GLN A 18 ? ? -139.79 10 9 LEU A 8 ? ? ASP A 9 ? ? -147.03 11 14 ASP A 9 ? ? SER A 10 ? ? -144.73 12 15 ALA A 23 ? ? ASP A 24 ? ? 141.70 #