HEADER SIGNALING PROTEIN 08-JUL-13 2MAE TITLE TRANSMEMBRANE-CYTOSOLIC PART OF TROP2 EXPLORED BY NMR AND MOLECULAR TITLE 2 DYNAMICS COMPND MOL_ID: 1; COMPND 2 MOLECULE: TUMOR-ASSOCIATED CALCIUM SIGNAL TRANSDUCER 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CYTOPLASMIC DOMAIN; COMPND 5 SYNONYM: CELL SURFACE GLYCOPROTEIN TROP-2, MEMBRANE COMPONENT COMPND 6 CHROMOSOME 1 SURFACE MARKER 1, PANCREATIC CARCINOMA MARKER PROTEIN COMPND 7 GA733-1; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TACSTD2, GA733-1, M1S1, TROP2 KEYWDS TRANSMEMBRANE-CYTOSOLIC PART OF TROP2, SIGNALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.VIDMAR,M.PAVI,G.ILC,J.PLAVEC,B.LENARI REVDAT 3 20-NOV-24 2MAE 1 REMARK REVDAT 2 14-JUN-23 2MAE 1 LINK REVDAT 1 09-JUL-14 2MAE 0 JRNL AUTH T.VIDMAR,M.PAVI,G.ILC,J.PLAVEC,B.LENARI JRNL TITL TRANSMEMBRANE-CYTOSOLIC PART OF TROP2 EXPLORED BY NMR AND JRNL TITL 2 MOLECULAR DYNAMICS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA, YASARA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), KRIEGER REMARK 3 E. (YASARA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: STRUCTURE REFINEMENT WAS PERFORMED REMARK 3 USING THE EXPLICIT SOLVENT MODEL IN THE YASARA PROGRAM SUITE. REMARK 4 REMARK 4 2MAE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1000103409. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.4 REMARK 210 IONIC STRENGTH : 20 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 5.5 MM DSS, 30% H2O/70% REMARK 210 TRIFLUOROETHANOL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 2D 1H-1H TOCSY; 2D 1H- REMARK 210 1H NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ REMARK 210 SPECTROMETER MODEL : VNMRS REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 20 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 7 ARG A 318 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 320 151.38 61.99 REMARK 500 2 GLU A 320 153.62 62.04 REMARK 500 3 GLU A 320 156.83 64.09 REMARK 500 4 GLU A 320 151.07 61.22 REMARK 500 5 GLU A 320 153.27 61.41 REMARK 500 6 GLU A 320 156.17 60.81 REMARK 500 7 GLU A 320 150.04 62.86 REMARK 500 8 GLU A 320 154.32 64.91 REMARK 500 9 GLU A 320 154.35 60.98 REMARK 500 10 GLU A 320 160.84 62.71 REMARK 500 11 GLU A 320 148.85 62.13 REMARK 500 12 GLU A 320 155.85 64.83 REMARK 500 13 GLU A 320 159.73 63.60 REMARK 500 14 GLU A 320 157.78 62.37 REMARK 500 15 GLU A 320 156.82 63.22 REMARK 500 16 GLU A 320 159.05 64.55 REMARK 500 17 GLU A 320 153.31 62.71 REMARK 500 17 PRO A 321 -80.82 -76.63 REMARK 500 18 GLU A 320 150.23 62.66 REMARK 500 18 PRO A 321 -71.27 -74.84 REMARK 500 19 GLU A 320 153.84 65.17 REMARK 500 19 PRO A 321 -70.61 -74.16 REMARK 500 20 GLU A 320 150.65 63.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 19342 RELATED DB: BMRB REMARK 900 RELATED ID: 2MAC RELATED DB: PDB DBREF 2MAE A 298 323 UNP P09758 TACD2_HUMAN 298 323 SEQRES 1 A 26 THR ASN ARG ARG LYS SEP GLY LYS TYR LYS LYS VAL GLU SEQRES 2 A 26 ILE LYS GLU LEU GLY GLU LEU ARG LYS GLU PRO SER LEU MODRES 2MAE SEP A 303 SER PHOSPHOSERINE HET SEP A 303 14 HETNAM SEP PHOSPHOSERINE HETSYN SEP PHOSPHONOSERINE FORMUL 1 SEP C3 H8 N O6 P HELIX 1 1 THR A 298 ARG A 318 1 21 LINK C LYS A 302 N SEP A 303 1555 1555 1.32 LINK C SEP A 303 N GLY A 304 1555 1555 1.33 CISPEP 1 GLU A 320 PRO A 321 1 -1.73 CISPEP 2 GLU A 320 PRO A 321 2 0.53 CISPEP 3 GLU A 320 PRO A 321 3 -0.54 CISPEP 4 GLU A 320 PRO A 321 4 -0.13 CISPEP 5 GLU A 320 PRO A 321 5 -0.99 CISPEP 6 GLU A 320 PRO A 321 6 0.48 CISPEP 7 GLU A 320 PRO A 321 7 -0.72 CISPEP 8 GLU A 320 PRO A 321 8 -3.14 CISPEP 9 GLU A 320 PRO A 321 9 -1.51 CISPEP 10 GLU A 320 PRO A 321 10 1.52 CISPEP 11 GLU A 320 PRO A 321 11 -1.28 CISPEP 12 GLU A 320 PRO A 321 12 1.26 CISPEP 13 GLU A 320 PRO A 321 13 -0.28 CISPEP 14 GLU A 320 PRO A 321 14 -0.34 CISPEP 15 GLU A 320 PRO A 321 15 -0.58 CISPEP 16 GLU A 320 PRO A 321 16 -0.65 CISPEP 17 GLU A 320 PRO A 321 17 -1.29 CISPEP 18 GLU A 320 PRO A 321 18 -1.19 CISPEP 19 GLU A 320 PRO A 321 19 1.13 CISPEP 20 GLU A 320 PRO A 321 20 -0.55 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1