HEADER LIPID TRANSPORT 16-JUL-13 2MAL TITLE SOLUTION STRUCTURE OF LIPID TRANSFER PROTEIN FROM LENTIL LENS TITLE 2 CULINARIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: NON-SPECIFIC LIPID-TRANSFER PROTEIN 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: LTP2, NON-SPECIFIC LIPID-TRANSFER PROTEIN 7, LTP7; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LENS CULINARIS; SOURCE 3 ORGANISM_COMMON: LENTIL; SOURCE 4 ORGANISM_TAXID: 3864; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET-HIS8-TRXL-LC-LTP2 KEYWDS PLANT LIPID TRANSFER PROTEIN, LENS CULINARIS, LIPID TRANSPORT EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.K.GIZATULLINA,K.S.MINEEV,Z.O.SHENKAREV REVDAT 3 29-NOV-17 2MAL 1 HELIX REVDAT 2 16-OCT-13 2MAL 1 JRNL REVDAT 1 02-OCT-13 2MAL 0 SPRSDE 02-OCT-13 2MAL 2LJO JRNL AUTH A.K.GIZATULLINA,E.I.FINKINA,K.S.MINEEV,D.N.MELNIKOVA, JRNL AUTH 2 I.V.BOGDANOV,I.N.TELEZHINSKAYA,S.V.BALANDIN,Z.O.SHENKAREV, JRNL AUTH 3 A.S.ARSENIEV,T.V.OVCHINNIKOVA JRNL TITL RECOMBINANT PRODUCTION AND SOLUTION STRUCTURE OF LIPID JRNL TITL 2 TRANSFER PROTEIN FROM LENTIL LENS CULINARIS. JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 439 427 2013 JRNL REFN ISSN 0006-291X JRNL PMID 23998937 JRNL DOI 10.1016/J.BBRC.2013.08.078 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XEASY, TALOS, PROCHECK, CYANA REMARK 3 AUTHORS : KELLER AND WUTHRICH (XEASY), CORNILESCU, DELAGLIO REMARK 3 AND BAX (TALOS), LASKOWSKI, MACARTHUR, SMITH, REMARK 3 JONES, HUTCHINSON, MORRIS, MOSS AND THO (PROCHECK) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MAL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1000103415. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 5.6 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.4 MM [U-100% 15N] LC-LTP2, REMARK 210 100% D2O; 1.4 MM [U-100% 15N] LC- REMARK 210 LTP2, 95% H2O/5% D2O; 1.0-1.5 MM REMARK 210 [U-100% 13C; U-100% 15N] LC-LTP2, REMARK 210 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D DQF-COSY; 2D 1H-1H TOCSY; 2D REMARK 210 1H-1H NOESY; 2D 1H-15N HSQC; 3D REMARK 210 1H-15N NOESY; 3D 1H-15N TOCSY; REMARK 210 3D HNHA; 3D HNHB; 3D 1H-13C REMARK 210 NOESY; 3D HCCH-TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XEASY, CYANA REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 3 -75.18 -95.41 REMARK 500 1 CYS A 4 -41.00 -175.86 REMARK 500 2 SER A 3 -74.81 -95.18 REMARK 500 2 CYS A 4 -37.94 -175.69 REMARK 500 2 THR A 90 44.03 -94.90 REMARK 500 3 SER A 3 -74.66 -95.51 REMARK 500 3 CYS A 4 -37.18 -175.47 REMARK 500 3 SER A 83 -171.28 -175.12 REMARK 500 4 SER A 3 -71.46 -143.08 REMARK 500 4 CYS A 4 -39.27 -175.62 REMARK 500 4 SER A 83 -172.94 -171.51 REMARK 500 5 SER A 3 -75.26 -95.16 REMARK 500 5 CYS A 4 -44.43 -175.86 REMARK 500 6 SER A 3 -75.47 -95.18 REMARK 500 6 CYS A 4 -41.27 -176.14 REMARK 500 6 TYR A 80 -169.85 -124.65 REMARK 500 6 THR A 90 54.81 -113.80 REMARK 500 7 SER A 3 -75.09 -95.16 REMARK 500 7 CYS A 4 -40.74 -175.72 REMARK 500 8 SER A 3 -74.95 -95.17 REMARK 500 8 CYS A 4 -40.03 -175.62 REMARK 500 9 SER A 3 -70.36 -143.20 REMARK 500 9 CYS A 4 -37.78 -175.61 REMARK 500 9 SER A 83 -178.12 -174.75 REMARK 500 10 SER A 3 -75.58 -95.07 REMARK 500 10 CYS A 4 -42.44 -176.09 REMARK 500 10 THR A 90 36.60 -94.85 REMARK 500 11 SER A 3 -74.97 -95.21 REMARK 500 11 CYS A 4 -41.03 -175.67 REMARK 500 12 SER A 3 -75.51 -95.63 REMARK 500 12 CYS A 4 -40.10 -176.21 REMARK 500 12 THR A 90 48.06 -103.91 REMARK 500 13 SER A 3 -74.57 -95.14 REMARK 500 13 CYS A 4 -40.15 -175.55 REMARK 500 13 TYR A 80 -169.82 -113.29 REMARK 500 13 SER A 83 -173.89 -175.68 REMARK 500 13 THR A 90 44.11 -94.87 REMARK 500 14 SER A 3 -75.29 -93.58 REMARK 500 14 CYS A 4 -51.53 -175.76 REMARK 500 15 SER A 3 -74.95 -95.28 REMARK 500 15 CYS A 4 -40.43 -175.76 REMARK 500 16 SER A 3 -76.07 -95.26 REMARK 500 16 CYS A 4 -41.60 -176.81 REMARK 500 17 SER A 3 -70.00 -143.05 REMARK 500 17 CYS A 4 -40.94 -175.60 REMARK 500 17 SER A 83 -179.47 -173.10 REMARK 500 18 SER A 3 -75.71 -95.52 REMARK 500 18 CYS A 4 -42.05 -176.21 REMARK 500 19 SER A 3 -75.97 -95.72 REMARK 500 19 CYS A 4 -40.91 -177.55 REMARK 500 REMARK 500 THIS ENTRY HAS 53 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1LIP RELATED DB: PDB REMARK 900 RELATED ID: 1AFH RELATED DB: PDB REMARK 900 RELATED ID: 1SIY RELATED DB: PDB REMARK 900 RELATED ID: 1RZL RELATED DB: PDB REMARK 900 RELATED ID: 1BV2 RELATED DB: PDB REMARK 900 RELATED ID: 1UVA RELATED DB: PDB REMARK 900 RELATED ID: 1UVB RELATED DB: PDB REMARK 900 RELATED ID: 1UVC RELATED DB: PDB REMARK 900 RELATED ID: 1T12 RELATED DB: PDB REMARK 900 RELATED ID: 1GH1 RELATED DB: PDB REMARK 900 RELATED ID: 1CZ2 RELATED DB: PDB REMARK 900 RELATED ID: 1BWO RELATED DB: PDB REMARK 900 RELATED ID: 19365 RELATED DB: BMRB DBREF 2MAL A 1 93 UNP A0AT29 NLTP2_LENCU 26 118 SEQRES 1 A 93 ALA ILE SER CYS GLY ALA VAL THR SER ASP LEU SER PRO SEQRES 2 A 93 CYS LEU THR TYR LEU THR GLY GLY PRO GLY PRO SER PRO SEQRES 3 A 93 GLN CYS CYS GLY GLY VAL LYS LYS LEU LEU ALA ALA ALA SEQRES 4 A 93 ASN THR THR PRO ASP ARG GLN ALA ALA CYS ASN CYS LEU SEQRES 5 A 93 LYS SER ALA ALA GLY SER ILE THR LYS LEU ASN THR ASN SEQRES 6 A 93 ASN ALA ALA ALA LEU PRO GLY LYS CYS GLY VAL ASN ILE SEQRES 7 A 93 PRO TYR LYS ILE SER THR THR THR ASN CYS ASN THR VAL SEQRES 8 A 93 LYS PHE HELIX 1 1 THR A 8 LEU A 18 1 11 HELIX 2 2 PRO A 26 ALA A 37 1 12 HELIX 3 3 THR A 42 ALA A 55 1 14 HELIX 4 4 ALA A 56 SER A 58 5 3 HELIX 5 5 THR A 64 LYS A 73 1 10 SSBOND 1 CYS A 4 CYS A 51 1555 1555 2.01 SSBOND 2 CYS A 14 CYS A 28 1555 1555 1.95 SSBOND 3 CYS A 29 CYS A 74 1555 1555 1.96 SSBOND 4 CYS A 49 CYS A 88 1555 1555 2.10 CISPEP 1 GLY A 23 PRO A 24 1 0.12 CISPEP 2 GLY A 23 PRO A 24 2 0.15 CISPEP 3 GLY A 23 PRO A 24 3 0.03 CISPEP 4 GLY A 23 PRO A 24 4 0.05 CISPEP 5 GLY A 23 PRO A 24 5 0.07 CISPEP 6 GLY A 23 PRO A 24 6 0.06 CISPEP 7 GLY A 23 PRO A 24 7 0.10 CISPEP 8 GLY A 23 PRO A 24 8 0.07 CISPEP 9 GLY A 23 PRO A 24 9 0.01 CISPEP 10 GLY A 23 PRO A 24 10 0.05 CISPEP 11 GLY A 23 PRO A 24 11 0.08 CISPEP 12 GLY A 23 PRO A 24 12 0.03 CISPEP 13 GLY A 23 PRO A 24 13 0.07 CISPEP 14 GLY A 23 PRO A 24 14 0.11 CISPEP 15 GLY A 23 PRO A 24 15 -0.02 CISPEP 16 GLY A 23 PRO A 24 16 0.05 CISPEP 17 GLY A 23 PRO A 24 17 0.06 CISPEP 18 GLY A 23 PRO A 24 18 0.04 CISPEP 19 GLY A 23 PRO A 24 19 0.17 CISPEP 20 GLY A 23 PRO A 24 20 0.07 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1