HEADER RNA BINDING PROTEIN 08-AUG-13 2MBY TITLE NMR STRUCTURE OF RRP7 C-TERMINAL DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBOSOMAL RNA-PROCESSING PROTEIN 7; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 256-297; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 STRAIN: ATCC 204508 / S288C; SOURCE 6 GENE: RRP7, YCL031C, YCL184, YCL31C; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETDUET KEYWDS 90S PRERIBOSOME, NUCLEOLUS, RNA BINDING PROTEIN EXPDTA SOLUTION NMR AUTHOR J.LIN,Y.FENG,K.YE REVDAT 4 15-MAY-24 2MBY 1 REMARK REVDAT 3 14-JUN-23 2MBY 1 SEQADV REVDAT 2 06-NOV-13 2MBY 1 JRNL REVDAT 1 25-SEP-13 2MBY 0 JRNL AUTH J.LIN,J.LU,Y.FENG,M.SUN,K.YE JRNL TITL AN RNA-BINDING COMPLEX INVOLVED IN RIBOSOME BIOGENESIS JRNL TITL 2 CONTAINS A PROTEIN WITH HOMOLOGY TO TRNA CCA-ADDING ENZYME. JRNL REF PLOS BIOL. V. 11 01669 2013 JRNL REFN ISSN 1544-9173 JRNL PMID 24130456 JRNL DOI 10.1371/JOURNAL.PBIO.1001669 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MBY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-AUG-13. REMARK 100 THE DEPOSITION ID IS D_1000103455. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6 REMARK 210 IONIC STRENGTH : 0.05 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM [U-100% 13C; U-100% 15N] REMARK 210 PROTEIN, 50 MM POTASSIUM REMARK 210 PHOSPHATE, 0.05 % SODIUM AZIDE, REMARK 210 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D 1H-15N TOCSY; REMARK 210 3D CBCA(CO)NH; 3D HNCACB; 3D REMARK 210 HNCO; 3D HN(CO)CA; 3D HBHA(CO)NH; REMARK 210 3D HCCH-TOCSY; 3D 1H-15N NOESY; REMARK 210 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA, NMRVIEW, FELIX REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 265 -80.62 -57.38 REMARK 500 LYS A 266 -177.35 177.26 REMARK 500 ALA A 289 -79.37 61.15 REMARK 500 LYS A 292 51.39 -92.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4M5D RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RRP7 N-TERMINAL DOMAIN REMARK 900 RELATED ID: 19416 RELATED DB: BMRB DBREF 2MBY A 256 297 UNP P25368 RRP7_YEAST 256 297 SEQADV 2MBY GLY A 252 UNP P25368 EXPRESSION TAG SEQADV 2MBY PRO A 253 UNP P25368 EXPRESSION TAG SEQADV 2MBY GLU A 254 UNP P25368 EXPRESSION TAG SEQADV 2MBY ALA A 255 UNP P25368 EXPRESSION TAG SEQRES 1 A 46 GLY PRO GLU ALA ASP PHE TYR ARG PHE GLN VAL ARG GLU SEQRES 2 A 46 ARG LYS LYS GLN GLU ILE ASN GLN LEU LEU SER LYS PHE SEQRES 3 A 46 LYS GLU ASP GLN GLU ARG ILE LYS VAL MET LYS ALA LYS SEQRES 4 A 46 ARG LYS PHE ASN PRO TYR THR HELIX 1 1 GLY A 252 LYS A 266 1 15 HELIX 2 2 GLN A 268 ALA A 289 1 22 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000