HEADER UNKNOWN FUNCTION 21-AUG-13 2MC8 TITLE NMR STRUCTURE OF PROTEIN RUMGNA_01855 FROM RUMINOCOCCUS GNAVUS ATCC TITLE 2 29149 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 36-149; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RUMINOCOCCUS GNAVUS; SOURCE 3 ORGANISM_TAXID: 411470; SOURCE 4 ATCC: 29149; SOURCE 5 GENE: RUMGNA_01855; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: SPEEDET KEYWDS HUMAN GUT MICROBIOME SECRETED PROTEIN, UNKNOWN FUNCTION, STRUCTURAL KEYWDS 2 GENOMICS, PSI-BIOLOGY, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.K.DUTTA,P.SERRANO,M.GERALT,K.WUTHRICH,JOINT CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (JCSG) REVDAT 3 14-JUN-23 2MC8 1 REMARK REVDAT 2 04-MAR-15 2MC8 1 JRNL TITLE REVDAT 1 23-OCT-13 2MC8 0 JRNL AUTH S.K.DUTTA,P.SERRANO,M.GERALT,K.WUTHRICH JRNL TITL NMR STRUCTURE OF A PROTEIN RUMGNA_01855 FROM RUMINOCOCCUS JRNL TITL 2 GNAVUS ATCC 29149 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER A. T. ET.AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MC8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-AUG-13. REMARK 100 THE DEPOSITION ID IS D_1000103465. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 0.0798 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.2 MM [U-99% 13C; U-99% 15N] REMARK 210 PROTEIN, 20 MM SODIUM PHOSPHATE, REMARK 210 50 MM SODIUM CHLORIDE, 5 MM REMARK 210 SODIUM AZIDE, 95% [U-99% 2H] D2O, REMARK 210 5% H2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 3D 1H-13C NOESY REMARK 210 AROMATIC; 3D 1H-15N NOESY; 4D REMARK 210 APSY HACANH; 5D APSY HACACONH; REMARK 210 5D APSY CBCACONH REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : J-UNIO, CYANA 3.0, CARA, TOPSPIN REMARK 210 3.1 REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 80 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 8 -160.95 -77.34 REMARK 500 1 GLN A 19 47.21 -82.43 REMARK 500 1 ALA A 20 -45.14 -166.27 REMARK 500 1 TYR A 32 -73.80 -101.38 REMARK 500 1 ASP A 53 -55.36 -135.08 REMARK 500 1 LYS A 78 -70.49 -87.76 REMARK 500 1 ASP A 79 -62.97 -134.63 REMARK 500 1 MET A 107 53.84 78.06 REMARK 500 1 SER A 111 83.05 -162.30 REMARK 500 2 PRO A 8 -158.76 -73.29 REMARK 500 2 TYR A 32 -76.32 -109.73 REMARK 500 2 LYS A 78 -75.69 -85.16 REMARK 500 2 ASP A 79 -60.25 -122.36 REMARK 500 2 VAL A 86 112.24 -160.04 REMARK 500 2 GLU A 94 -48.37 -131.47 REMARK 500 2 ASP A 106 -78.81 -69.53 REMARK 500 2 MET A 107 -14.92 174.62 REMARK 500 3 GLU A 6 -167.73 -173.08 REMARK 500 3 PRO A 8 -144.57 -76.18 REMARK 500 3 ASP A 12 117.15 -163.46 REMARK 500 3 ALA A 20 -47.81 -175.11 REMARK 500 3 TYR A 32 -62.10 -100.55 REMARK 500 3 LEU A 47 108.05 -59.50 REMARK 500 3 LYS A 78 -144.57 -84.50 REMARK 500 3 ASN A 80 -28.08 -146.08 REMARK 500 3 ASP A 106 -75.40 -70.53 REMARK 500 3 MET A 107 -4.69 176.40 REMARK 500 3 SER A 111 70.65 -156.05 REMARK 500 4 PRO A 8 -152.15 -77.35 REMARK 500 4 ALA A 20 -45.49 -177.58 REMARK 500 4 LYS A 30 60.18 38.95 REMARK 500 4 TYR A 32 -64.34 -107.77 REMARK 500 4 ASP A 79 -60.20 -161.04 REMARK 500 4 MET A 107 60.03 73.39 REMARK 500 4 SER A 111 85.84 -162.25 REMARK 500 5 TYR A 32 -73.27 -90.46 REMARK 500 5 ASP A 79 -59.74 -133.21 REMARK 500 5 VAL A 86 118.37 -170.02 REMARK 500 5 TYR A 99 106.35 -59.73 REMARK 500 5 MET A 107 11.83 85.25 REMARK 500 6 PRO A 8 -162.28 -74.62 REMARK 500 6 ALA A 20 -49.00 -160.56 REMARK 500 6 LYS A 30 66.60 65.38 REMARK 500 6 TYR A 32 -73.04 -103.57 REMARK 500 6 GLN A 76 120.03 -170.52 REMARK 500 6 ASP A 79 -60.62 -126.61 REMARK 500 6 VAL A 86 102.04 -161.51 REMARK 500 6 MET A 107 31.95 72.41 REMARK 500 7 PRO A 8 -170.18 -64.49 REMARK 500 7 TYR A 32 -67.42 -108.97 REMARK 500 REMARK 500 THIS ENTRY HAS 152 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4HYZ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE PROTEIN AT 2.25 A RESOLUTION REMARK 900 RELATED ID: 19431 RELATED DB: BMRB REMARK 900 RELATED ID: JCSG-417405 RELATED DB: TARGETTRACK DBREF 2MC8 A 1 114 UNP A7B2S7 A7B2S7_RUMGN 36 149 SEQRES 1 A 114 GLY GLU ILE LEU LYS GLU LEU PRO GLU GLY PHE ASP LYS SEQRES 2 A 114 GLU THR VAL ARG LYS GLN ALA MET GLU ASP ILE GLU ILE SEQRES 3 A 114 ALA GLN SER LYS ASP TYR GLU SER TRP LYS SER ARG PHE SEQRES 4 A 114 THR LYS ASP LEU GLN SER SER LEU THR GLU GLU SER TYR SEQRES 5 A 114 ASP SER TYR LEU LYS ILE LEU GLU LYS GLN GLY GLU PHE SEQRES 6 A 114 LYS GLU PHE GLY LYS CYS THR TYR LEU GLY GLN ILE LYS SEQRES 7 A 114 ASP ASN LYS LYS TYR GLY GLY VAL ILE ILE VAL VAL LYS SEQRES 8 A 114 TYR GLU GLU GLY ASN VAL ASN TYR SER LEU ALA TYR ASP SEQRES 9 A 114 GLU ASP MET ASN LEU VAL SER PHE THR MET HELIX 1 1 ASP A 12 SER A 29 1 18 HELIX 2 2 TYR A 32 SER A 37 1 6 HELIX 3 3 THR A 40 SER A 45 1 6 HELIX 4 4 GLU A 49 TYR A 52 5 4 HELIX 5 5 ASP A 53 GLU A 60 1 8 SHEET 1 A 4 PHE A 65 ILE A 77 0 SHEET 2 A 4 LYS A 82 TYR A 92 -1 O VAL A 89 N LYS A 70 SHEET 3 A 4 TYR A 99 ASP A 104 -1 O TYR A 99 N ILE A 88 SHEET 4 A 4 LEU A 109 THR A 113 -1 O VAL A 110 N ALA A 102 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1