data_2MCM # _entry.id 2MCM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2MCM WWPDB D_1000178338 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2MCM _pdbx_database_status.recvd_initial_deposition_date 1991-05-08 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # _audit_author.name 'Van Roey, P.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Crystal structure analysis of auromomycin apoprotein (macromomycin) shows importance of protein side chains to chromophore binding selectivity. ; _citation.journal_abbrev Proc.Natl.Acad.Sci.Usa _citation.journal_volume 86 _citation.page_first 6587 _citation.page_last 6591 _citation.year 1989 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 2771945 _citation.pdbx_database_id_DOI 10.1073/pnas.86.17.6587 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Van Roey, P.' 1 primary 'Beerman, T.A.' 2 # _cell.entry_id 2MCM _cell.length_a 36.290 _cell.length_b 35.580 _cell.length_c 38.040 _cell.angle_alpha 90.00 _cell.angle_beta 99.59 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2MCM _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man MACROMOMYCIN 10755.872 1 ? ? ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 3 non-polymer syn '(4R)-2-METHYLPENTANE-2,4-DIOL' 118.174 2 ? ? ? ? 4 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 1 ? ? ? ? 5 water nat water 18.015 109 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;APGVTVTPATGLSNGQTVTVSATGLTPGTVYHVGQCAVVEPGVIGCDATTSTDVTADAAGKITAQLKVHSSFQAVVGADG TPWGTVNCKVVSCSAGLGSDSGEGAAQAITFA ; _entity_poly.pdbx_seq_one_letter_code_can ;APGVTVTPATGLSNGQTVTVSATGLTPGTVYHVGQCAVVEPGVIGCDATTSTDVTADAAGKITAQLKVHSSFQAVVGADG TPWGTVNCKVVSCSAGLGSDSGEGAAQAITFA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 PRO n 1 3 GLY n 1 4 VAL n 1 5 THR n 1 6 VAL n 1 7 THR n 1 8 PRO n 1 9 ALA n 1 10 THR n 1 11 GLY n 1 12 LEU n 1 13 SER n 1 14 ASN n 1 15 GLY n 1 16 GLN n 1 17 THR n 1 18 VAL n 1 19 THR n 1 20 VAL n 1 21 SER n 1 22 ALA n 1 23 THR n 1 24 GLY n 1 25 LEU n 1 26 THR n 1 27 PRO n 1 28 GLY n 1 29 THR n 1 30 VAL n 1 31 TYR n 1 32 HIS n 1 33 VAL n 1 34 GLY n 1 35 GLN n 1 36 CYS n 1 37 ALA n 1 38 VAL n 1 39 VAL n 1 40 GLU n 1 41 PRO n 1 42 GLY n 1 43 VAL n 1 44 ILE n 1 45 GLY n 1 46 CYS n 1 47 ASP n 1 48 ALA n 1 49 THR n 1 50 THR n 1 51 SER n 1 52 THR n 1 53 ASP n 1 54 VAL n 1 55 THR n 1 56 ALA n 1 57 ASP n 1 58 ALA n 1 59 ALA n 1 60 GLY n 1 61 LYS n 1 62 ILE n 1 63 THR n 1 64 ALA n 1 65 GLN n 1 66 LEU n 1 67 LYS n 1 68 VAL n 1 69 HIS n 1 70 SER n 1 71 SER n 1 72 PHE n 1 73 GLN n 1 74 ALA n 1 75 VAL n 1 76 VAL n 1 77 GLY n 1 78 ALA n 1 79 ASP n 1 80 GLY n 1 81 THR n 1 82 PRO n 1 83 TRP n 1 84 GLY n 1 85 THR n 1 86 VAL n 1 87 ASN n 1 88 CYS n 1 89 LYS n 1 90 VAL n 1 91 VAL n 1 92 SER n 1 93 CYS n 1 94 SER n 1 95 ALA n 1 96 GLY n 1 97 LEU n 1 98 GLY n 1 99 SER n 1 100 ASP n 1 101 SER n 1 102 GLY n 1 103 GLU n 1 104 GLY n 1 105 ALA n 1 106 ALA n 1 107 GLN n 1 108 ALA n 1 109 ILE n 1 110 THR n 1 111 PHE n 1 112 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Streptomyces _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptomyces macromomyceticus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1917 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MACM_STRMA _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P01549 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MLQNTSRFLARAGATVGVAAGLAFSLPADRDGAPGVTVTPATGLSNGQTVTVSATGLTPGTVYHVGQCAVVEPGVIGCDA TTSTDVTADAAGKITAQLKVHSSFQAVVGANGTPWGTVNCKVVSCSAGLGSDSGEGAAQAITFA ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2MCM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 112 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P01549 _struct_ref_seq.db_align_beg 33 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 144 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 112 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2MCM _struct_ref_seq_dif.mon_id ASP _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 79 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P01549 _struct_ref_seq_dif.db_mon_id ASN _struct_ref_seq_dif.pdbx_seq_db_seq_num 111 _struct_ref_seq_dif.details CONFLICT _struct_ref_seq_dif.pdbx_auth_seq_num 79 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174 MRD non-polymer . '(4R)-2-METHYLPENTANE-2,4-DIOL' ? 'C6 H14 O2' 118.174 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2MCM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.25 _exptl_crystal.density_percent_sol 45.34 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.entry_id 2MCM _refine.ls_number_reflns_obs 13119 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.0 _refine.ls_d_res_high 1.5 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.153 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ;A NUMBER OF WATERS ARE DISORDERED AND ARE PRESENTED IN TWO OR MORE ALTERNATE CONFORMATIONS. BECAUSE OF THE REFINEMENT PROCEDURE USED, THE OCCUPANCIES DO NOT ADD UP TO 1.0 FOR WATERS IN ALTERNATE CONFORMATIONS. ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_phase_error ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 752 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 25 _refine_hist.number_atoms_solvent 109 _refine_hist.number_atoms_total 886 _refine_hist.d_res_high 1.5 _refine_hist.d_res_low 10.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function p_bond_d 0.022 0.020 ? ? 'X-RAY DIFFRACTION' ? p_angle_d 0.036 0.030 ? ? 'X-RAY DIFFRACTION' ? p_angle_deg ? ? ? ? 'X-RAY DIFFRACTION' ? p_planar_d 0.058 0.050 ? ? 'X-RAY DIFFRACTION' ? p_hb_or_metal_coord ? ? ? ? 'X-RAY DIFFRACTION' ? p_mcbond_it 1.46 1.500 ? ? 'X-RAY DIFFRACTION' ? p_mcangle_it 2.19 1.500 ? ? 'X-RAY DIFFRACTION' ? p_scbond_it 1.76 1.500 ? ? 'X-RAY DIFFRACTION' ? p_scangle_it 2.76 2.000 ? ? 'X-RAY DIFFRACTION' ? p_plane_restr 0.017 0.020 ? ? 'X-RAY DIFFRACTION' ? p_chiral_restr 0.220 0.150 ? ? 'X-RAY DIFFRACTION' ? p_singtor_nbd 0.177 0.500 ? ? 'X-RAY DIFFRACTION' ? p_multtor_nbd 0.214 0.500 ? ? 'X-RAY DIFFRACTION' ? p_xhyhbond_nbd 0.221 0.500 ? ? 'X-RAY DIFFRACTION' ? p_xyhbond_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? p_planar_tor 3.0 2.5 ? ? 'X-RAY DIFFRACTION' ? p_staggered_tor 11.6 15.0 ? ? 'X-RAY DIFFRACTION' ? p_orthonormal_tor 12.2 15.0 ? ? 'X-RAY DIFFRACTION' ? p_transverse_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_special_tor ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 2MCM _struct.title MACROMOMYCIN _struct.pdbx_descriptor MACROMOMYCIN _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2MCM _struct_keywords.pdbx_keywords APOPROTEIN _struct_keywords.text APOPROTEIN # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 36 SG ? ? ? 1_555 A CYS 46 SG ? ? A CYS 36 A CYS 46 1_555 ? ? ? ? ? ? ? 2.047 ? disulf2 disulf ? ? A CYS 88 SG ? ? ? 1_555 A CYS 93 SG ? ? A CYS 88 A CYS 93 1_555 ? ? ? ? ? ? ? 2.043 ? metalc1 metalc ? ? B CA . CA ? ? ? 1_555 F HOH . O ? ? A CA 163 A HOH 198 1_555 ? ? ? ? ? ? ? 2.510 ? metalc2 metalc ? ? B CA . CA ? ? ? 1_555 F HOH . O ? ? A CA 163 A HOH 209 1_555 ? ? ? ? ? ? ? 3.322 ? metalc3 metalc ? ? B CA . CA ? ? ? 1_555 A GLU 40 OE1 ? ? A CA 163 A GLU 40 1_555 ? ? ? ? ? ? ? 2.530 ? metalc4 metalc ? ? B CA . CA ? ? ? 1_555 A GLU 40 OE2 ? ? A CA 163 A GLU 40 1_555 ? ? ? ? ? ? ? 2.360 ? metalc5 metalc ? ? B CA . CA ? ? ? 1_555 F HOH . O B ? A CA 163 A HOH 197 1_555 ? ? ? ? ? ? ? 2.274 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id THR _struct_mon_prot_cis.label_seq_id 7 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id THR _struct_mon_prot_cis.auth_seq_id 7 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 8 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 8 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -3.46 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details BRL ? 8 ? RB1 ? 2 ? RB2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense BRL 1 2 ? anti-parallel BRL 2 3 ? anti-parallel BRL 3 4 ? anti-parallel BRL 4 5 ? parallel BRL 5 6 ? anti-parallel BRL 6 7 ? anti-parallel BRL 7 8 ? anti-parallel RB1 1 2 ? anti-parallel RB2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id BRL 1 SER A 51 ? ALA A 56 ? SER A 51 ALA A 56 BRL 2 THR A 29 ? CYS A 36 ? THR A 29 CYS A 36 BRL 3 LYS A 89 ? SER A 99 ? LYS A 89 SER A 99 BRL 4 GLY A 102 ? ALA A 112 ? GLY A 102 ALA A 112 BRL 5 ALA A 1 ? LEU A 12 ? ALA A 1 LEU A 12 BRL 6 GLN A 16 ? GLY A 24 ? GLN A 16 GLY A 24 BRL 7 GLY A 60 ? VAL A 68 ? GLY A 60 VAL A 68 BRL 8 SER A 51 ? ALA A 56 ? SER A 51 ALA A 56 RB1 1 CYS A 36 ? GLU A 40 ? CYS A 36 GLU A 40 RB1 2 GLY A 42 ? CYS A 46 ? GLY A 42 CYS A 46 RB2 1 SER A 70 ? ALA A 78 ? SER A 70 ALA A 78 RB2 2 GLY A 80 ? CYS A 88 ? GLY A 80 CYS A 88 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id BRL 1 2 O THR A 52 ? O THR A 52 N VAL A 33 ? N VAL A 33 BRL 2 3 O GLY A 34 ? O GLY A 34 N GLY A 96 ? N GLY A 96 BRL 3 4 O ALA A 95 ? O ALA A 95 N GLN A 107 ? N GLN A 107 BRL 4 5 O THR A 110 ? O THR A 110 N GLY A 11 ? N GLY A 11 BRL 5 6 O THR A 5 ? O THR A 5 N SER A 21 ? N SER A 21 BRL 6 7 O VAL A 20 ? O VAL A 20 N ALA A 64 ? N ALA A 64 RB1 1 2 N ALA A 37 ? N ALA A 37 O GLY A 45 ? O GLY A 45 RB2 1 2 O PHE A 72 ? O PHE A 72 N VAL A 86 ? N VAL A 86 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details CHR Unknown ? ? ? ? 8 ? AC1 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE CA A 163' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE MRD A 113' AC3 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE MRD A 115' AC4 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE MPD A 114' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 CHR 8 HIS A 32 ? HIS A 32 . ? 1_555 ? 2 CHR 8 CYS A 36 ? CYS A 36 . ? 1_555 ? 3 CHR 8 ILE A 44 ? ILE A 44 . ? 1_555 ? 4 CHR 8 CYS A 46 ? CYS A 46 . ? 1_555 ? 5 CHR 8 SER A 51 ? SER A 51 . ? 1_555 ? 6 CHR 8 ASP A 53 ? ASP A 53 . ? 1_555 ? 7 CHR 8 SER A 94 ? SER A 94 . ? 1_555 ? 8 CHR 8 ASP A 100 ? ASP A 100 . ? 1_555 ? 9 AC1 3 GLU A 40 ? GLU A 40 . ? 1_555 ? 10 AC1 3 HOH F . ? HOH A 197 . ? 1_555 ? 11 AC1 3 HOH F . ? HOH A 198 . ? 1_555 ? 12 AC2 6 HIS A 32 ? HIS A 32 . ? 1_555 ? 13 AC2 6 CYS A 36 ? CYS A 36 . ? 1_555 ? 14 AC2 6 GLY A 96 ? GLY A 96 . ? 1_555 ? 15 AC2 6 LEU A 97 ? LEU A 97 . ? 1_555 ? 16 AC2 6 HOH F . ? HOH A 116 . ? 1_555 ? 17 AC2 6 HOH F . ? HOH A 186 . ? 1_555 ? 18 AC3 4 THR A 50 ? THR A 50 . ? 1_555 ? 19 AC3 4 THR A 52 ? THR A 52 . ? 1_555 ? 20 AC3 4 GLN A 65 ? GLN A 65 . ? 1_555 ? 21 AC3 4 LYS A 67 ? LYS A 67 . ? 1_555 ? 22 AC4 3 ILE A 44 ? ILE A 44 . ? 1_555 ? 23 AC4 3 SER A 92 ? SER A 92 . ? 1_555 ? 24 AC4 3 SER A 94 ? SER A 94 . ? 1_555 ? # _database_PDB_matrix.entry_id 2MCM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2MCM _atom_sites.fract_transf_matrix[1][1] 0.027556 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004656 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.028106 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.026661 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # _atom_sites_footnote.id 1 _atom_sites_footnote.text 'RESIDUE PRO 8 IS A CIS PROLINE.' # loop_ _atom_type.symbol C CA N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 VAL 4 4 4 VAL VAL A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 SER 13 13 13 SER SER A . n A 1 14 ASN 14 14 14 ASN ASN A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 GLN 16 16 16 GLN GLN A . n A 1 17 THR 17 17 17 THR THR A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 THR 19 19 19 THR THR A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 THR 23 23 23 THR THR A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 PRO 27 27 27 PRO PRO A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 THR 29 29 29 THR THR A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 TYR 31 31 31 TYR TYR A . n A 1 32 HIS 32 32 32 HIS HIS A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 GLN 35 35 35 GLN GLN A . n A 1 36 CYS 36 36 36 CYS CYS A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 PRO 41 41 41 PRO PRO A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 CYS 46 46 46 CYS CYS A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 ALA 48 48 48 ALA ALA A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 THR 52 52 52 THR THR A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 ASP 57 57 57 ASP ASP A . n A 1 58 ALA 58 58 58 ALA ALA A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 THR 63 63 63 THR THR A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 GLN 65 65 65 GLN GLN A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 LYS 67 67 67 LYS LYS A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 HIS 69 69 69 HIS HIS A . n A 1 70 SER 70 70 70 SER SER A . n A 1 71 SER 71 71 71 SER SER A . n A 1 72 PHE 72 72 72 PHE PHE A . n A 1 73 GLN 73 73 73 GLN GLN A . n A 1 74 ALA 74 74 74 ALA ALA A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 VAL 76 76 76 VAL VAL A . n A 1 77 GLY 77 77 77 GLY GLY A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 ASP 79 79 79 ASP ASP A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 THR 81 81 81 THR THR A . n A 1 82 PRO 82 82 82 PRO PRO A . n A 1 83 TRP 83 83 83 TRP TRP A . n A 1 84 GLY 84 84 84 GLY GLY A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 ASN 87 87 87 ASN ASN A . n A 1 88 CYS 88 88 88 CYS CYS A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 SER 92 92 92 SER SER A . n A 1 93 CYS 93 93 93 CYS CYS A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 ALA 95 95 95 ALA ALA A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 SER 99 99 99 SER SER A . n A 1 100 ASP 100 100 100 ASP ASP A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 GLU 103 103 103 GLU GLU A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 ALA 105 105 105 ALA ALA A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 GLN 107 107 107 GLN GLN A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 ILE 109 109 109 ILE ILE A . n A 1 110 THR 110 110 110 THR THR A . n A 1 111 PHE 111 111 111 PHE PHE A . n A 1 112 ALA 112 112 112 ALA ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 163 163 CA CA A . C 3 MRD 1 113 113 MRD MPD A . D 3 MRD 1 115 115 MRD MPD A . E 4 MPD 1 114 114 MPD MPD A . F 5 HOH 1 116 116 HOH HOH A . F 5 HOH 2 117 117 HOH HOH A . F 5 HOH 3 118 118 HOH HOH A . F 5 HOH 4 119 119 HOH HOH A . F 5 HOH 5 120 120 HOH HOH A . F 5 HOH 6 121 121 HOH HOH A . F 5 HOH 7 122 122 HOH HOH A . F 5 HOH 8 123 123 HOH HOH A . F 5 HOH 9 124 124 HOH HOH A . F 5 HOH 10 125 125 HOH HOH A . F 5 HOH 11 126 126 HOH HOH A . F 5 HOH 12 127 127 HOH HOH A . F 5 HOH 13 128 128 HOH HOH A . F 5 HOH 14 129 129 HOH HOH A . F 5 HOH 15 130 130 HOH HOH A . F 5 HOH 16 131 131 HOH HOH A . F 5 HOH 17 132 132 HOH HOH A . F 5 HOH 18 133 133 HOH HOH A . F 5 HOH 19 134 134 HOH HOH A . F 5 HOH 20 135 135 HOH HOH A . F 5 HOH 21 136 136 HOH HOH A . F 5 HOH 22 137 137 HOH HOH A . F 5 HOH 23 138 138 HOH HOH A . F 5 HOH 24 139 139 HOH HOH A . F 5 HOH 25 140 140 HOH HOH A . F 5 HOH 26 141 141 HOH HOH A . F 5 HOH 27 142 142 HOH HOH A . F 5 HOH 28 143 143 HOH HOH A . F 5 HOH 29 144 144 HOH HOH A . F 5 HOH 30 145 145 HOH HOH A . F 5 HOH 31 146 146 HOH HOH A . F 5 HOH 32 147 147 HOH HOH A . F 5 HOH 33 148 148 HOH HOH A . F 5 HOH 34 149 149 HOH HOH A . F 5 HOH 35 150 150 HOH HOH A . F 5 HOH 36 151 151 HOH HOH A . F 5 HOH 37 152 152 HOH HOH A . F 5 HOH 38 153 153 HOH HOH A . F 5 HOH 39 154 154 HOH HOH A . F 5 HOH 40 155 155 HOH HOH A . F 5 HOH 41 156 156 HOH HOH A . F 5 HOH 42 157 157 HOH HOH A . F 5 HOH 43 158 158 HOH HOH A . F 5 HOH 44 159 159 HOH HOH A . F 5 HOH 45 160 160 HOH HOH A . F 5 HOH 46 161 161 HOH HOH A . F 5 HOH 47 162 162 HOH HOH A . F 5 HOH 48 164 164 HOH HOH A . F 5 HOH 49 165 165 HOH HOH A . F 5 HOH 50 166 166 HOH HOH A . F 5 HOH 51 167 167 HOH HOH A . F 5 HOH 52 168 168 HOH HOH A . F 5 HOH 53 169 169 HOH HOH A . F 5 HOH 54 170 170 HOH HOH A . F 5 HOH 55 171 171 HOH HOH A . F 5 HOH 56 172 172 HOH HOH A . F 5 HOH 57 173 173 HOH HOH A . F 5 HOH 58 174 174 HOH HOH A . F 5 HOH 59 175 175 HOH HOH A . F 5 HOH 60 176 176 HOH HOH A . F 5 HOH 61 177 177 HOH HOH A . F 5 HOH 62 178 178 HOH HOH A . F 5 HOH 63 179 179 HOH HOH A . F 5 HOH 64 180 180 HOH HOH A . F 5 HOH 65 181 181 HOH HOH A . F 5 HOH 66 182 182 HOH HOH A . F 5 HOH 67 183 183 HOH HOH A . F 5 HOH 68 184 184 HOH HOH A . F 5 HOH 69 185 185 HOH HOH A . F 5 HOH 70 186 186 HOH HOH A . F 5 HOH 71 187 187 HOH HOH A . F 5 HOH 72 188 188 HOH HOH A . F 5 HOH 73 189 189 HOH HOH A . F 5 HOH 74 190 190 HOH HOH A . F 5 HOH 75 191 191 HOH HOH A . F 5 HOH 76 192 192 HOH HOH A . F 5 HOH 77 193 193 HOH HOH A . F 5 HOH 78 194 194 HOH HOH A . F 5 HOH 79 195 195 HOH HOH A . F 5 HOH 80 196 196 HOH HOH A . F 5 HOH 81 197 197 HOH HOH A . F 5 HOH 82 198 198 HOH HOH A . F 5 HOH 83 199 199 HOH HOH A . F 5 HOH 84 200 200 HOH HOH A . F 5 HOH 85 201 201 HOH HOH A . F 5 HOH 86 202 202 HOH HOH A . F 5 HOH 87 203 203 HOH HOH A . F 5 HOH 88 204 204 HOH HOH A . F 5 HOH 89 205 205 HOH HOH A . F 5 HOH 90 206 206 HOH HOH A . F 5 HOH 91 207 207 HOH HOH A . F 5 HOH 92 208 208 HOH HOH A . F 5 HOH 93 209 209 HOH HOH A . F 5 HOH 94 210 210 HOH HOH A . F 5 HOH 95 211 211 HOH HOH A . F 5 HOH 96 212 212 HOH HOH A . F 5 HOH 97 213 213 HOH HOH A . F 5 HOH 98 214 214 HOH HOH A . F 5 HOH 99 215 215 HOH HOH A . F 5 HOH 100 216 216 HOH HOH A . F 5 HOH 101 217 217 HOH HOH A . F 5 HOH 102 218 218 HOH HOH A . F 5 HOH 103 219 219 HOH HOH A . F 5 HOH 104 220 220 HOH HOH A . F 5 HOH 105 221 221 HOH HOH A . F 5 HOH 106 222 222 HOH HOH A . F 5 HOH 107 223 223 HOH HOH A . F 5 HOH 108 224 224 HOH HOH A . F 5 HOH 109 225 225 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? F HOH . ? A HOH 198 ? 1_555 CA ? B CA . ? A CA 163 ? 1_555 O ? F HOH . ? A HOH 209 ? 1_555 178.0 ? 2 O ? F HOH . ? A HOH 198 ? 1_555 CA ? B CA . ? A CA 163 ? 1_555 OE1 ? A GLU 40 ? A GLU 40 ? 1_555 58.3 ? 3 O ? F HOH . ? A HOH 209 ? 1_555 CA ? B CA . ? A CA 163 ? 1_555 OE1 ? A GLU 40 ? A GLU 40 ? 1_555 122.4 ? 4 O ? F HOH . ? A HOH 198 ? 1_555 CA ? B CA . ? A CA 163 ? 1_555 OE2 ? A GLU 40 ? A GLU 40 ? 1_555 111.9 ? 5 O ? F HOH . ? A HOH 209 ? 1_555 CA ? B CA . ? A CA 163 ? 1_555 OE2 ? A GLU 40 ? A GLU 40 ? 1_555 68.9 ? 6 OE1 ? A GLU 40 ? A GLU 40 ? 1_555 CA ? B CA . ? A CA 163 ? 1_555 OE2 ? A GLU 40 ? A GLU 40 ? 1_555 53.6 ? 7 O ? F HOH . ? A HOH 198 ? 1_555 CA ? B CA . ? A CA 163 ? 1_555 O B F HOH . ? A HOH 197 ? 1_555 83.4 ? 8 O ? F HOH . ? A HOH 209 ? 1_555 CA ? B CA . ? A CA 163 ? 1_555 O B F HOH . ? A HOH 197 ? 1_555 95.1 ? 9 OE1 ? A GLU 40 ? A GLU 40 ? 1_555 CA ? B CA . ? A CA 163 ? 1_555 O B F HOH . ? A HOH 197 ? 1_555 136.4 ? 10 OE2 ? A GLU 40 ? A GLU 40 ? 1_555 CA ? B CA . ? A CA 163 ? 1_555 O B F HOH . ? A HOH 197 ? 1_555 151.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1993-01-15 2 'Structure model' 1 1 2008-03-03 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-11-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Derived calculations' 4 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_database_status 2 4 'Structure model' struct_conf # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 4 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_pdbx_database_status.process_site' # _software.name PROFFT _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _pdbx_database_remark.id 700 _pdbx_database_remark.text ;SHEET THE STRUCTURE CONSISTS OF A SEVEN-STRANDED ANTIPARALLEL BETA-BARREL (FLATTENED) AND TWO ANTIPARALLEL BETA-RIBBONS. THE FOLDING OF THE BETA-BARREL HAS SIMILAR GREEK KEY MOTIF AS THE C DOMAIN OF IMMUNOGLOBULIN. THE STRUCTURE IS COMPOSED OF A FLATTENED SEVEN-STRANDED ANTIPARALLEL BETA-BARREL AND TWO ANTIPARALLEL BETA-SHEET RIBBONS. THE BARREL AND RIBBONS DEFINE A DEEP CLEFT THAT IS THE CHROMOPHORE BINDING SITE. RESIDUES LISTED UNDER SITE REFER TO RESIDUES THAT HAVE SIDE CHAINS EXTENDING INTO THIS AREA. THE SHEET PRESENTED AS *BRL* ON SHEET RECORDS BELOW IS ACTUALLY A SEVEN-STRANDED BETA-BARREL. THIS IS REPRESENTED BY A EIGHT-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS ARE IDENTICAL. ; # _pdbx_entry_details.entry_id 2MCM _pdbx_entry_details.compound_details ;THE CHROMOPHORE BINDING SITE IS LOCATED BETWEEN THE BARREL AND THE RIBBONS. RESIDUES LISTED ON SITE CHR RECORDS ARE THOSE THAT HAVE SIDE CHAINS EXTENDING INTO THIS AREA. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;THE CALCIUM COORDINATION IS A DISTORTED PENTAGONAL BIPYRAMID. LIGANDS COME FROM THREE DIFFERENT PROTEIN MOLECULES AN TWO WATER MOLECULES. O LEU 89 AND OD1 ASP 79 ARE THE TOP AND BOTTOM OF THE BIPYRAMID. ONE LIGAND IN THE PENTAGON IS MISSING. THIS AREA IS EXPOSED TO THE LESS ORDERED SOLVENT. A WATER MOLECULE (HOH 209) IS PRESENT IN APPROXIMATELY THE RIGHT ORIENTATION BUT 3.23 ANGSTROMS FROM THE CALCIUM. BECAUSE OF PDB FORMAT DEFINITIONS THE LIGANDS THE CALCIUM THAT ARE IN DIFFERENT PROTEIN MOLECULES CANNOT BE PRESENTED ON CONECT RECORDS BELOW. THEY ARE: O LEU 89 (-X, Y + 1/2, -Z) OD1 ASP 79 (-X, Y - 1/2, -Z) ; _pdbx_entry_details.sequence_details ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 143 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 156 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CD1 A TYR 31 ? ? CE1 A TYR 31 ? ? CZ A TYR 31 ? ? 113.01 119.80 -6.79 0.90 N 2 1 CB A ASP 57 ? ? CG A ASP 57 ? ? OD1 A ASP 57 ? ? 126.89 118.30 8.59 0.90 N 3 1 CB A ASP 79 ? A CG A ASP 79 ? A OD1 A ASP 79 ? A 124.16 118.30 5.86 0.90 N # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 '(4R)-2-METHYLPENTANE-2,4-DIOL' MRD 4 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD 5 water HOH #