data_2MCN # _entry.id 2MCN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2MCN pdb_00002mcn 10.2210/pdb2mcn/pdb RCSB RCSB103478 ? ? BMRB 19447 ? ? WWPDB D_1000103478 ? ? # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.content_type _pdbx_database_related.details 19447 BMRB unspecified . 2LZ6 PDB unspecified . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2MCN _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-08-22 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ortega-Roldan, J.' 1 'Salmon, L.' 2 'Azuaga, A.' 3 'Blackledge, M.' 4 'Van Nuland, N.' 5 # _citation.id primary _citation.title 'Distinct ubiquitin binding modes exhibited by SH3 domains: molecular determinants and functional implications.' _citation.journal_abbrev 'Plos One' _citation.journal_volume 8 _citation.page_first e73018 _citation.page_last e73018 _citation.year 2013 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1932-6203 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24039852 _citation.pdbx_database_id_DOI 10.1371/journal.pone.0073018 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ortega Roldan, J.L.' 1 ? primary 'Casares, S.' 2 ? primary 'Ringkjbing Jensen, M.' 3 ? primary 'Cardenes, N.' 4 ? primary 'Bravo, J.' 5 ? primary 'Blackledge, M.' 6 ? primary 'Azuaga, A.I.' 7 ? primary 'van Nuland, N.A.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CD2-associated protein' 7281.089 1 ? ? 'SH3A domain (UNP residues 2-58)' ? 2 polymer man Ubiquitin 8576.831 1 ? ? 'UNP residues 1-76' ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Mesenchyme-to-epithelium transition protein with SH3 domains 1, METS-1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no VDYIVEYDYDAVHDDELTIRVGEIIRNVKKLQEEGWLEGELNGRRGMFPDNFVKEIKRETE VDYIVEYDYDAVHDDELTIRVGEIIRNVKKLQEEGWLEGELNGRRGMFPDNFVKEIKRETE A ? 2 'polypeptide(L)' no no MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 ASP n 1 3 TYR n 1 4 ILE n 1 5 VAL n 1 6 GLU n 1 7 TYR n 1 8 ASP n 1 9 TYR n 1 10 ASP n 1 11 ALA n 1 12 VAL n 1 13 HIS n 1 14 ASP n 1 15 ASP n 1 16 GLU n 1 17 LEU n 1 18 THR n 1 19 ILE n 1 20 ARG n 1 21 VAL n 1 22 GLY n 1 23 GLU n 1 24 ILE n 1 25 ILE n 1 26 ARG n 1 27 ASN n 1 28 VAL n 1 29 LYS n 1 30 LYS n 1 31 LEU n 1 32 GLN n 1 33 GLU n 1 34 GLU n 1 35 GLY n 1 36 TRP n 1 37 LEU n 1 38 GLU n 1 39 GLY n 1 40 GLU n 1 41 LEU n 1 42 ASN n 1 43 GLY n 1 44 ARG n 1 45 ARG n 1 46 GLY n 1 47 MET n 1 48 PHE n 1 49 PRO n 1 50 ASP n 1 51 ASN n 1 52 PHE n 1 53 VAL n 1 54 LYS n 1 55 GLU n 1 56 ILE n 1 57 LYS n 1 58 ARG n 1 59 GLU n 1 60 THR n 1 61 GLU n 2 1 MET n 2 2 GLN n 2 3 ILE n 2 4 PHE n 2 5 VAL n 2 6 LYS n 2 7 THR n 2 8 LEU n 2 9 THR n 2 10 GLY n 2 11 LYS n 2 12 THR n 2 13 ILE n 2 14 THR n 2 15 LEU n 2 16 GLU n 2 17 VAL n 2 18 GLU n 2 19 PRO n 2 20 SER n 2 21 ASP n 2 22 THR n 2 23 ILE n 2 24 GLU n 2 25 ASN n 2 26 VAL n 2 27 LYS n 2 28 ALA n 2 29 LYS n 2 30 ILE n 2 31 GLN n 2 32 ASP n 2 33 LYS n 2 34 GLU n 2 35 GLY n 2 36 ILE n 2 37 PRO n 2 38 PRO n 2 39 ASP n 2 40 GLN n 2 41 GLN n 2 42 ARG n 2 43 LEU n 2 44 ILE n 2 45 PHE n 2 46 ALA n 2 47 GLY n 2 48 LYS n 2 49 GLN n 2 50 LEU n 2 51 GLU n 2 52 ASP n 2 53 GLY n 2 54 ARG n 2 55 THR n 2 56 LEU n 2 57 SER n 2 58 ASP n 2 59 TYR n 2 60 ASN n 2 61 ILE n 2 62 GLN n 2 63 LYS n 2 64 GLU n 2 65 SER n 2 66 THR n 2 67 LEU n 2 68 HIS n 2 69 LEU n 2 70 VAL n 2 71 LEU n 2 72 ARG n 2 73 LEU n 2 74 ARG n 2 75 GLY n 2 76 GLY n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? mouse ? 'Cd2ap, Mets1' ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? plasmid ? ? ? pET21a ? ? 2 1 sample ? ? ? human ? UBC ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? plasmid ? ? ? pET29b ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP CD2AP_MOUSE Q9JLQ0 1 VDYIVEYDYDAVHDDELTIRVGEIIRNVKKLQEEGWLEGELNGRRGMFPDNFVKEIKRETE 2 ? 2 UNP UBC_HUMAN P0CG48 2 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2MCN A 1 ? 61 ? Q9JLQ0 2 ? 62 ? 2 62 2 2 2MCN B 1 ? 76 ? P0CG48 1 ? 76 ? 1 76 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 3 '3D HNCO JNH, JCC, JCH, JCAHA' 1 3 4 '3D HNCO JNH, JCC, JCH, JCAHA' 1 4 5 '3D HNCO JNH, JCC, JCH, JCAHA' 1 5 6 '2D 1H-15N HSQC FILTERED DIPSAP' 1 6 2 '2D 1H-15N HSQC' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0 _pdbx_nmr_exptl_sample_conditions.pH 6.0 _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '0.2 mM [U-99% 15N] CD2AP SH3-A, 1 mM ubiquitin, 90% H2O/10% D2O' 1 '90% H2O/10% D2O' '0.25 mM [U-99% 15N] ubiquitin, mM CD2AP SH3-A, 90% H2O/10% D2O' 2 '90% H2O/10% D2O' '0.9 mM [U-99% 13CU-99% 15N] CD2AP SH3-A, 0.46 mM [U-99% 15N ubiquitin' 3 '90% H2O/10% D2O' '0.8 mM [U-99% 13CU-99% 15N] CD2AP SH3-A, 1.37 mM [U-99% 15N] ubiquitin' 4 '90% H2O/10% D2O' '0.7 mM [U-99% 13CU-99% 15N] CD2AP SH3-A, 1.75 mM [U-99% 15N] ubiquitin' 5 '90% H2O/10% D2O' '0.25 mM [U-99% 13C; U-99% 15N] CD2AP SH3-A, 1.75 MM [U-99% 15N] ubiquitin' 6 '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 600 Varian 'Uniform NMR System' 1 'Varian Uniform NMR System' 800 Varian 'Uniform NMR System' 2 'Varian Uniform NMR System' # _pdbx_nmr_refine.entry_id 2MCN _pdbx_nmr_refine.method 'simulated annealing, molecular dynamics, docking, simulated annealing, molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2MCN _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2MCN _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Dominguez, Boelens' refinement HADDOCK ? 1 'Brunger, Adams, Clore, Gros, Nilges and Read' 'structure solution' CNS/SCULPTOR ? 2 'Johnson, One Moon Scientific' 'structure solution' NMRView ? 3 'Brunger, Adams, Clore, Gros, Nilges and Read' 'structure solution' HADDOCK ? 4 ? refinement CNS/SCULPTOR ? 5 'Brunger, Adams, Clore, Gros, Nilges and Read' refinement HADDOCK ? 6 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2MCN _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2MCN _struct.title 'Distinct ubiquitin binding modes exhibited by SH3 domains: molecular determinants and functional implications' _struct.pdbx_model_details 'lowest energy, model1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2MCN _struct_keywords.pdbx_keywords 'CELL CYCLE/SIGNALING PROTEIN' _struct_keywords.text 'CELL CYCLE-SIGNALING PROTEIN complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 49 ? VAL A 53 ? PRO A 50 VAL A 54 5 ? 5 HELX_P HELX_P2 2 THR B 22 ? ASP B 32 ? THR B 22 ASP B 32 1 ? 11 HELX_P HELX_P3 3 PRO B 37 ? GLN B 41 ? PRO B 37 GLN B 41 5 ? 5 HELX_P HELX_P4 4 THR B 55 ? ASN B 60 ? THR B 55 ASN B 60 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? C ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 44 ? PHE A 48 ? ARG A 45 PHE A 49 A 2 LEU A 37 ? LEU A 41 ? LEU A 38 LEU A 42 A 3 GLU A 23 ? LYS A 30 ? GLU A 24 LYS A 31 A 4 TYR A 3 ? VAL A 5 ? TYR A 4 VAL A 6 A 5 LYS A 54 ? GLU A 55 ? LYS A 55 GLU A 56 B 1 ASP A 8 ? TYR A 9 ? ASP A 9 TYR A 10 B 2 ILE A 19 ? ARG A 20 ? ILE A 20 ARG A 21 C 1 LEU B 15 ? GLU B 16 ? LEU B 15 GLU B 16 C 2 GLN B 2 ? THR B 7 ? GLN B 2 THR B 7 C 3 THR B 66 ? VAL B 70 ? THR B 66 VAL B 70 C 4 ARG B 42 ? PHE B 45 ? ARG B 42 PHE B 45 C 5 LYS B 48 ? GLN B 49 ? LYS B 48 GLN B 49 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ARG A 44 ? O ARG A 45 N LEU A 41 ? N LEU A 42 A 2 3 O GLU A 38 ? O GLU A 39 N LYS A 29 ? N LYS A 30 A 3 4 O GLU A 23 ? O GLU A 24 N VAL A 5 ? N VAL A 6 A 4 5 N ILE A 4 ? N ILE A 5 O LYS A 54 ? O LYS A 55 B 1 2 N TYR A 9 ? N TYR A 10 O ILE A 19 ? O ILE A 20 C 1 2 O LEU B 15 ? O LEU B 15 N ILE B 3 ? N ILE B 3 C 2 3 N LYS B 6 ? N LYS B 6 O LEU B 67 ? O LEU B 67 C 3 4 O HIS B 68 ? O HIS B 68 N ILE B 44 ? N ILE B 44 C 4 5 N PHE B 45 ? N PHE B 45 O LYS B 48 ? O LYS B 48 # _atom_sites.entry_id 2MCN _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 2 2 VAL VAL A . n A 1 2 ASP 2 3 3 ASP ASP A . n A 1 3 TYR 3 4 4 TYR TYR A . n A 1 4 ILE 4 5 5 ILE ILE A . n A 1 5 VAL 5 6 6 VAL VAL A . n A 1 6 GLU 6 7 7 GLU GLU A . n A 1 7 TYR 7 8 8 TYR TYR A . n A 1 8 ASP 8 9 9 ASP ASP A . n A 1 9 TYR 9 10 10 TYR TYR A . n A 1 10 ASP 10 11 11 ASP ASP A . n A 1 11 ALA 11 12 12 ALA ALA A . n A 1 12 VAL 12 13 13 VAL VAL A . n A 1 13 HIS 13 14 14 HIS HIS A . n A 1 14 ASP 14 15 15 ASP ASP A . n A 1 15 ASP 15 16 16 ASP ASP A . n A 1 16 GLU 16 17 17 GLU GLU A . n A 1 17 LEU 17 18 18 LEU LEU A . n A 1 18 THR 18 19 19 THR THR A . n A 1 19 ILE 19 20 20 ILE ILE A . n A 1 20 ARG 20 21 21 ARG ARG A . n A 1 21 VAL 21 22 22 VAL VAL A . n A 1 22 GLY 22 23 23 GLY GLY A . n A 1 23 GLU 23 24 24 GLU GLU A . n A 1 24 ILE 24 25 25 ILE ILE A . n A 1 25 ILE 25 26 26 ILE ILE A . n A 1 26 ARG 26 27 27 ARG ARG A . n A 1 27 ASN 27 28 28 ASN ASN A . n A 1 28 VAL 28 29 29 VAL VAL A . n A 1 29 LYS 29 30 30 LYS LYS A . n A 1 30 LYS 30 31 31 LYS LYS A . n A 1 31 LEU 31 32 32 LEU LEU A . n A 1 32 GLN 32 33 33 GLN GLN A . n A 1 33 GLU 33 34 34 GLU GLU A . n A 1 34 GLU 34 35 35 GLU GLU A . n A 1 35 GLY 35 36 36 GLY GLY A . n A 1 36 TRP 36 37 37 TRP TRP A . n A 1 37 LEU 37 38 38 LEU LEU A . n A 1 38 GLU 38 39 39 GLU GLU A . n A 1 39 GLY 39 40 40 GLY GLY A . n A 1 40 GLU 40 41 41 GLU GLU A . n A 1 41 LEU 41 42 42 LEU LEU A . n A 1 42 ASN 42 43 43 ASN ASN A . n A 1 43 GLY 43 44 44 GLY GLY A . n A 1 44 ARG 44 45 45 ARG ARG A . n A 1 45 ARG 45 46 46 ARG ARG A . n A 1 46 GLY 46 47 47 GLY GLY A . n A 1 47 MET 47 48 48 MET MET A . n A 1 48 PHE 48 49 49 PHE PHE A . n A 1 49 PRO 49 50 50 PRO PRO A . n A 1 50 ASP 50 51 51 ASP ASP A . n A 1 51 ASN 51 52 52 ASN ASN A . n A 1 52 PHE 52 53 53 PHE PHE A . n A 1 53 VAL 53 54 54 VAL VAL A . n A 1 54 LYS 54 55 55 LYS LYS A . n A 1 55 GLU 55 56 56 GLU GLU A . n A 1 56 ILE 56 57 57 ILE ILE A . n A 1 57 LYS 57 58 58 LYS LYS A . n A 1 58 ARG 58 59 ? ? ? A . n A 1 59 GLU 59 60 ? ? ? A . n A 1 60 THR 60 61 ? ? ? A . n A 1 61 GLU 61 62 ? ? ? A . n B 2 1 MET 1 1 1 MET MET B . n B 2 2 GLN 2 2 2 GLN GLN B . n B 2 3 ILE 3 3 3 ILE ILE B . n B 2 4 PHE 4 4 4 PHE PHE B . n B 2 5 VAL 5 5 5 VAL VAL B . n B 2 6 LYS 6 6 6 LYS LYS B . n B 2 7 THR 7 7 7 THR THR B . n B 2 8 LEU 8 8 8 LEU LEU B . n B 2 9 THR 9 9 9 THR THR B . n B 2 10 GLY 10 10 10 GLY GLY B . n B 2 11 LYS 11 11 11 LYS LYS B . n B 2 12 THR 12 12 12 THR THR B . n B 2 13 ILE 13 13 13 ILE ILE B . n B 2 14 THR 14 14 14 THR THR B . n B 2 15 LEU 15 15 15 LEU LEU B . n B 2 16 GLU 16 16 16 GLU GLU B . n B 2 17 VAL 17 17 17 VAL VAL B . n B 2 18 GLU 18 18 18 GLU GLU B . n B 2 19 PRO 19 19 19 PRO PRO B . n B 2 20 SER 20 20 20 SER SER B . n B 2 21 ASP 21 21 21 ASP ASP B . n B 2 22 THR 22 22 22 THR THR B . n B 2 23 ILE 23 23 23 ILE ILE B . n B 2 24 GLU 24 24 24 GLU GLU B . n B 2 25 ASN 25 25 25 ASN ASN B . n B 2 26 VAL 26 26 26 VAL VAL B . n B 2 27 LYS 27 27 27 LYS LYS B . n B 2 28 ALA 28 28 28 ALA ALA B . n B 2 29 LYS 29 29 29 LYS LYS B . n B 2 30 ILE 30 30 30 ILE ILE B . n B 2 31 GLN 31 31 31 GLN GLN B . n B 2 32 ASP 32 32 32 ASP ASP B . n B 2 33 LYS 33 33 33 LYS LYS B . n B 2 34 GLU 34 34 34 GLU GLU B . n B 2 35 GLY 35 35 35 GLY GLY B . n B 2 36 ILE 36 36 36 ILE ILE B . n B 2 37 PRO 37 37 37 PRO PRO B . n B 2 38 PRO 38 38 38 PRO PRO B . n B 2 39 ASP 39 39 39 ASP ASP B . n B 2 40 GLN 40 40 40 GLN GLN B . n B 2 41 GLN 41 41 41 GLN GLN B . n B 2 42 ARG 42 42 42 ARG ARG B . n B 2 43 LEU 43 43 43 LEU LEU B . n B 2 44 ILE 44 44 44 ILE ILE B . n B 2 45 PHE 45 45 45 PHE PHE B . n B 2 46 ALA 46 46 46 ALA ALA B . n B 2 47 GLY 47 47 47 GLY GLY B . n B 2 48 LYS 48 48 48 LYS LYS B . n B 2 49 GLN 49 49 49 GLN GLN B . n B 2 50 LEU 50 50 50 LEU LEU B . n B 2 51 GLU 51 51 51 GLU GLU B . n B 2 52 ASP 52 52 52 ASP ASP B . n B 2 53 GLY 53 53 53 GLY GLY B . n B 2 54 ARG 54 54 54 ARG ARG B . n B 2 55 THR 55 55 55 THR THR B . n B 2 56 LEU 56 56 56 LEU LEU B . n B 2 57 SER 57 57 57 SER SER B . n B 2 58 ASP 58 58 58 ASP ASP B . n B 2 59 TYR 59 59 59 TYR TYR B . n B 2 60 ASN 60 60 60 ASN ASN B . n B 2 61 ILE 61 61 61 ILE ILE B . n B 2 62 GLN 62 62 62 GLN GLN B . n B 2 63 LYS 63 63 63 LYS LYS B . n B 2 64 GLU 64 64 64 GLU GLU B . n B 2 65 SER 65 65 65 SER SER B . n B 2 66 THR 66 66 66 THR THR B . n B 2 67 LEU 67 67 67 LEU LEU B . n B 2 68 HIS 68 68 68 HIS HIS B . n B 2 69 LEU 69 69 69 LEU LEU B . n B 2 70 VAL 70 70 70 VAL VAL B . n B 2 71 LEU 71 71 71 LEU LEU B . n B 2 72 ARG 72 72 72 ARG ARG B . n B 2 73 LEU 73 73 73 LEU LEU B . n B 2 74 ARG 74 74 74 ARG ARG B . n B 2 75 GLY 75 75 75 GLY GLY B . n B 2 76 GLY 76 76 76 GLY GLY B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-02-05 2 'Structure model' 1 1 2016-04-27 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' pdbx_nmr_software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 3 'Structure model' '_pdbx_nmr_software.name' # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 6 _pdbx_validate_close_contact.auth_atom_id_1 H _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 GLU _pdbx_validate_close_contact.auth_seq_id_1 51 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 HH _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 TYR _pdbx_validate_close_contact.auth_seq_id_2 59 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.31 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 8 ? ? -178.14 -171.45 2 1 ASN A 28 ? ? 35.71 70.66 3 1 ASP B 52 ? ? -57.35 -6.62 4 1 SER B 65 ? ? -70.91 -161.41 5 1 ARG B 72 ? ? -57.60 107.40 6 1 LEU B 73 ? ? 62.77 91.24 7 2 ASN A 52 ? ? -68.24 4.84 8 2 LEU B 56 ? ? -66.40 8.07 9 2 ARG B 74 ? ? 55.76 91.02 10 3 ASP B 52 ? ? -58.34 -5.28 11 3 ARG B 72 ? ? -142.93 -0.54 12 3 LEU B 73 ? ? 63.41 92.85 13 4 TYR A 8 ? ? -178.03 -177.87 14 4 ASN A 28 ? ? 39.31 69.18 15 4 LEU B 71 ? ? -93.78 -82.14 16 4 ARG B 72 ? ? -168.81 -63.90 17 5 PHE B 45 ? ? 176.25 116.71 18 5 ASP B 52 ? ? -58.49 -5.81 19 5 ARG B 74 ? ? 62.00 -83.75 20 6 ASP B 52 ? ? -57.65 -7.67 21 6 SER B 65 ? ? -70.59 -159.58 22 6 THR B 66 ? ? -160.04 88.17 23 6 ARG B 72 ? ? -56.09 -76.84 24 7 ARG A 27 ? ? -47.98 157.32 25 7 ASN A 28 ? ? -20.61 104.20 26 7 ILE B 13 ? ? 38.61 87.61 27 7 ASP B 52 ? ? -57.91 -5.39 28 7 LEU B 56 ? ? -67.11 12.58 29 7 LEU B 71 ? ? -116.47 -132.61 30 7 LEU B 73 ? ? -162.75 4.45 31 8 ILE B 3 ? ? -120.02 -160.15 32 8 ASP B 52 ? ? -46.09 -19.63 33 8 ASN B 60 ? ? 39.60 35.07 34 8 LEU B 71 ? ? -128.97 -69.93 35 8 ARG B 72 ? ? -158.59 -73.31 36 8 LEU B 73 ? ? -162.86 86.43 37 9 LEU B 71 ? ? -121.56 -168.70 38 9 ARG B 72 ? ? -72.01 -161.35 39 10 SER B 65 ? ? -71.94 -161.35 40 10 ARG B 72 ? ? -51.01 106.48 41 10 LEU B 73 ? ? 54.85 91.84 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ARG 59 ? A ARG 58 2 1 Y 1 A GLU 60 ? A GLU 59 3 1 Y 1 A THR 61 ? A THR 60 4 1 Y 1 A GLU 62 ? A GLU 61 5 2 Y 1 A ARG 59 ? A ARG 58 6 2 Y 1 A GLU 60 ? A GLU 59 7 2 Y 1 A THR 61 ? A THR 60 8 2 Y 1 A GLU 62 ? A GLU 61 9 3 Y 1 A ARG 59 ? A ARG 58 10 3 Y 1 A GLU 60 ? A GLU 59 11 3 Y 1 A THR 61 ? A THR 60 12 3 Y 1 A GLU 62 ? A GLU 61 13 4 Y 1 A ARG 59 ? A ARG 58 14 4 Y 1 A GLU 60 ? A GLU 59 15 4 Y 1 A THR 61 ? A THR 60 16 4 Y 1 A GLU 62 ? A GLU 61 17 5 Y 1 A ARG 59 ? A ARG 58 18 5 Y 1 A GLU 60 ? A GLU 59 19 5 Y 1 A THR 61 ? A THR 60 20 5 Y 1 A GLU 62 ? A GLU 61 21 6 Y 1 A ARG 59 ? A ARG 58 22 6 Y 1 A GLU 60 ? A GLU 59 23 6 Y 1 A THR 61 ? A THR 60 24 6 Y 1 A GLU 62 ? A GLU 61 25 7 Y 1 A ARG 59 ? A ARG 58 26 7 Y 1 A GLU 60 ? A GLU 59 27 7 Y 1 A THR 61 ? A THR 60 28 7 Y 1 A GLU 62 ? A GLU 61 29 8 Y 1 A ARG 59 ? A ARG 58 30 8 Y 1 A GLU 60 ? A GLU 59 31 8 Y 1 A THR 61 ? A THR 60 32 8 Y 1 A GLU 62 ? A GLU 61 33 9 Y 1 A ARG 59 ? A ARG 58 34 9 Y 1 A GLU 60 ? A GLU 59 35 9 Y 1 A THR 61 ? A THR 60 36 9 Y 1 A GLU 62 ? A GLU 61 37 10 Y 1 A ARG 59 ? A ARG 58 38 10 Y 1 A GLU 60 ? A GLU 59 39 10 Y 1 A THR 61 ? A THR 60 40 10 Y 1 A GLU 62 ? A GLU 61 #