data_2MEX # _entry.id 2MEX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2MEX RCSB RCSB103545 BMRB 18276 WWPDB D_1000103545 # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 18276 BMRB . unspecified 2lpz PDB . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2MEX _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-10-01 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Loquet, A.' 1 'Habenstein, B.' 2 'Chevelkov, V.' 3 'Giller, K.' 4 'Becker, S.' 5 'Lange, A.' 6 # _citation.id primary _citation.title 'Atomic structure and handedness of the building block of a biological assembly.' _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 135 _citation.page_first 19135 _citation.page_last 19138 _citation.year 2013 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24328247 _citation.pdbx_database_id_DOI 10.1021/ja411362q # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Loquet, A.' 1 primary 'Habenstein, B.' 2 primary 'Chevelkov, V.' 3 primary 'Vasa, S.K.' 4 primary 'Giller, K.' 5 primary 'Becker, S.' 6 primary 'Lange, A.' 7 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Protein PrgI' _entity.formula_weight 8864.868 _entity.pdbx_number_of_molecules 4 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MATPWSGYLDDVSAKFDTGVDNLQTQVTEALDKLAAKPSDPALLAAYQSKLSEYNLYRNAQSNTVKVFKDIDAAIIQNFR _entity_poly.pdbx_seq_one_letter_code_can MATPWSGYLDDVSAKFDTGVDNLQTQVTEALDKLAAKPSDPALLAAYQSKLSEYNLYRNAQSNTVKVFKDIDAAIIQNFR _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 THR n 1 4 PRO n 1 5 TRP n 1 6 SER n 1 7 GLY n 1 8 TYR n 1 9 LEU n 1 10 ASP n 1 11 ASP n 1 12 VAL n 1 13 SER n 1 14 ALA n 1 15 LYS n 1 16 PHE n 1 17 ASP n 1 18 THR n 1 19 GLY n 1 20 VAL n 1 21 ASP n 1 22 ASN n 1 23 LEU n 1 24 GLN n 1 25 THR n 1 26 GLN n 1 27 VAL n 1 28 THR n 1 29 GLU n 1 30 ALA n 1 31 LEU n 1 32 ASP n 1 33 LYS n 1 34 LEU n 1 35 ALA n 1 36 ALA n 1 37 LYS n 1 38 PRO n 1 39 SER n 1 40 ASP n 1 41 PRO n 1 42 ALA n 1 43 LEU n 1 44 LEU n 1 45 ALA n 1 46 ALA n 1 47 TYR n 1 48 GLN n 1 49 SER n 1 50 LYS n 1 51 LEU n 1 52 SER n 1 53 GLU n 1 54 TYR n 1 55 ASN n 1 56 LEU n 1 57 TYR n 1 58 ARG n 1 59 ASN n 1 60 ALA n 1 61 GLN n 1 62 SER n 1 63 ASN n 1 64 THR n 1 65 VAL n 1 66 LYS n 1 67 VAL n 1 68 PHE n 1 69 LYS n 1 70 ASP n 1 71 ILE n 1 72 ASP n 1 73 ALA n 1 74 ALA n 1 75 ILE n 1 76 ILE n 1 77 GLN n 1 78 ASN n 1 79 PHE n 1 80 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'prgI, STM2873' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'LT2 / SGSC1412 / ATCC 700720' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Salmonella enterica subsp. enterica serovar Typhimurium' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 99287 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector 'BL21 (DE3)' _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PRGI_SALTY _struct_ref.pdbx_db_accession P41784 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MATPWSGYLDDVSAKFDTGVDNLQTQVTEALDKLAAKPSDPALLAAYQSKLSEYNLYRNAQSNTVKVFKDIDAAIIQNFR ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2MEX A 1 ? 80 ? P41784 1 ? 80 ? 1 80 2 1 2MEX B 1 ? 80 ? P41784 1 ? 80 ? 1 80 3 1 2MEX C 1 ? 80 ? P41784 1 ? 80 ? 1 80 4 1 2MEX D 1 ? 80 ? P41784 1 ? 80 ? 1 80 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _pdbx_nmr_exptl.conditions_id 1 _pdbx_nmr_exptl.experiment_id 1 _pdbx_nmr_exptl.solution_id 1 _pdbx_nmr_exptl.type '13C-13C (PDSD)' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pH 5.5 _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.temperature 278 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents ;10 mg [U-100% 13C; U-100% 15N] PrgI, 10 mg [1;3-13C]glycerol [U-100% 15N] PrgI, 10 mg [2-13C]glycerol [U-100% 15N] PrgI, 10 mg [1-13C]glucose [U-100% 15N] PrgI, 10 mg [2-13C]glucose [U-100% 15N] PrgI, wet ; _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system wet # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 850 Bruker Avance 1 'Bruker Avance' 600 Bruker Avance 2 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2MEX _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 640 _pdbx_nmr_ensemble.conformers_submitted_total_number 15 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2MEX _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2MEX _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_software.authors ? _pdbx_nmr_software.classification refinement _pdbx_nmr_software.name CNS _pdbx_nmr_software.version ? _pdbx_nmr_software.ordinal 1 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2MEX _exptl.method 'SOLID-STATE NMR' _exptl.method_details ? # _struct.entry_id 2MEX _struct.title 'Structure of the tetrameric building block of the Salmonella Typhimurium PrgI Type three secretion system needle' _struct.pdbx_descriptor 'Protein PrgI' _struct.pdbx_model_details 'lowest energy, model1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2MEX _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT' _struct_keywords.text 'Secretion, Needle, Filament, PROTEIN TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 7 ? VAL A 20 ? GLY A 7 VAL A 20 1 ? 14 HELX_P HELX_P2 2 ASN A 22 ? ALA A 36 ? ASN A 22 ALA A 36 1 ? 15 HELX_P HELX_P3 3 ASP A 40 ? PHE A 79 ? ASP A 40 PHE A 79 1 ? 40 HELX_P HELX_P4 4 GLY B 7 ? VAL B 20 ? GLY B 7 VAL B 20 1 ? 14 HELX_P HELX_P5 5 ASN B 22 ? ALA B 36 ? ASN B 22 ALA B 36 1 ? 15 HELX_P HELX_P6 6 ASP B 40 ? PHE B 79 ? ASP B 40 PHE B 79 1 ? 40 HELX_P HELX_P7 7 GLY C 7 ? VAL C 20 ? GLY C 7 VAL C 20 1 ? 14 HELX_P HELX_P8 8 ASN C 22 ? ALA C 36 ? ASN C 22 ALA C 36 1 ? 15 HELX_P HELX_P9 9 ASP C 40 ? PHE C 79 ? ASP C 40 PHE C 79 1 ? 40 HELX_P HELX_P10 10 GLY D 7 ? VAL D 20 ? GLY D 7 VAL D 20 1 ? 14 HELX_P HELX_P11 11 ASN D 22 ? ALA D 36 ? ASN D 22 ALA D 36 1 ? 15 HELX_P HELX_P12 12 ASP D 40 ? PHE D 79 ? ASP D 40 PHE D 79 1 ? 40 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 2MEX _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 THR 3 3 3 THR THR A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 TRP 5 5 5 TRP TRP A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 TYR 8 8 8 TYR TYR A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 ASP 10 10 10 ASP ASP A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 SER 13 13 13 SER SER A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 PHE 16 16 16 PHE PHE A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 THR 18 18 18 THR THR A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 ASN 22 22 22 ASN ASN A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 GLN 24 24 24 GLN GLN A . n A 1 25 THR 25 25 25 THR THR A . n A 1 26 GLN 26 26 26 GLN GLN A . n A 1 27 VAL 27 27 27 VAL VAL A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 GLU 29 29 29 GLU GLU A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 ALA 36 36 36 ALA ALA A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 PRO 38 38 38 PRO PRO A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 PRO 41 41 41 PRO PRO A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 TYR 47 47 47 TYR TYR A . n A 1 48 GLN 48 48 48 GLN GLN A . n A 1 49 SER 49 49 49 SER SER A . n A 1 50 LYS 50 50 50 LYS LYS A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 GLU 53 53 53 GLU GLU A . n A 1 54 TYR 54 54 54 TYR TYR A . n A 1 55 ASN 55 55 55 ASN ASN A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 TYR 57 57 57 TYR TYR A . n A 1 58 ARG 58 58 58 ARG ARG A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 GLN 61 61 61 GLN GLN A . n A 1 62 SER 62 62 62 SER SER A . n A 1 63 ASN 63 63 63 ASN ASN A . n A 1 64 THR 64 64 64 THR THR A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 PHE 68 68 68 PHE PHE A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 ASP 70 70 70 ASP ASP A . n A 1 71 ILE 71 71 71 ILE ILE A . n A 1 72 ASP 72 72 72 ASP ASP A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 ALA 74 74 74 ALA ALA A . n A 1 75 ILE 75 75 75 ILE ILE A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 GLN 77 77 77 GLN GLN A . n A 1 78 ASN 78 78 78 ASN ASN A . n A 1 79 PHE 79 79 79 PHE PHE A . n A 1 80 ARG 80 80 80 ARG ARG A . n B 1 1 MET 1 1 1 MET MET B . n B 1 2 ALA 2 2 2 ALA ALA B . n B 1 3 THR 3 3 3 THR THR B . n B 1 4 PRO 4 4 4 PRO PRO B . n B 1 5 TRP 5 5 5 TRP TRP B . n B 1 6 SER 6 6 6 SER SER B . n B 1 7 GLY 7 7 7 GLY GLY B . n B 1 8 TYR 8 8 8 TYR TYR B . n B 1 9 LEU 9 9 9 LEU LEU B . n B 1 10 ASP 10 10 10 ASP ASP B . n B 1 11 ASP 11 11 11 ASP ASP B . n B 1 12 VAL 12 12 12 VAL VAL B . n B 1 13 SER 13 13 13 SER SER B . n B 1 14 ALA 14 14 14 ALA ALA B . n B 1 15 LYS 15 15 15 LYS LYS B . n B 1 16 PHE 16 16 16 PHE PHE B . n B 1 17 ASP 17 17 17 ASP ASP B . n B 1 18 THR 18 18 18 THR THR B . n B 1 19 GLY 19 19 19 GLY GLY B . n B 1 20 VAL 20 20 20 VAL VAL B . n B 1 21 ASP 21 21 21 ASP ASP B . n B 1 22 ASN 22 22 22 ASN ASN B . n B 1 23 LEU 23 23 23 LEU LEU B . n B 1 24 GLN 24 24 24 GLN GLN B . n B 1 25 THR 25 25 25 THR THR B . n B 1 26 GLN 26 26 26 GLN GLN B . n B 1 27 VAL 27 27 27 VAL VAL B . n B 1 28 THR 28 28 28 THR THR B . n B 1 29 GLU 29 29 29 GLU GLU B . n B 1 30 ALA 30 30 30 ALA ALA B . n B 1 31 LEU 31 31 31 LEU LEU B . n B 1 32 ASP 32 32 32 ASP ASP B . n B 1 33 LYS 33 33 33 LYS LYS B . n B 1 34 LEU 34 34 34 LEU LEU B . n B 1 35 ALA 35 35 35 ALA ALA B . n B 1 36 ALA 36 36 36 ALA ALA B . n B 1 37 LYS 37 37 37 LYS LYS B . n B 1 38 PRO 38 38 38 PRO PRO B . n B 1 39 SER 39 39 39 SER SER B . n B 1 40 ASP 40 40 40 ASP ASP B . n B 1 41 PRO 41 41 41 PRO PRO B . n B 1 42 ALA 42 42 42 ALA ALA B . n B 1 43 LEU 43 43 43 LEU LEU B . n B 1 44 LEU 44 44 44 LEU LEU B . n B 1 45 ALA 45 45 45 ALA ALA B . n B 1 46 ALA 46 46 46 ALA ALA B . n B 1 47 TYR 47 47 47 TYR TYR B . n B 1 48 GLN 48 48 48 GLN GLN B . n B 1 49 SER 49 49 49 SER SER B . n B 1 50 LYS 50 50 50 LYS LYS B . n B 1 51 LEU 51 51 51 LEU LEU B . n B 1 52 SER 52 52 52 SER SER B . n B 1 53 GLU 53 53 53 GLU GLU B . n B 1 54 TYR 54 54 54 TYR TYR B . n B 1 55 ASN 55 55 55 ASN ASN B . n B 1 56 LEU 56 56 56 LEU LEU B . n B 1 57 TYR 57 57 57 TYR TYR B . n B 1 58 ARG 58 58 58 ARG ARG B . n B 1 59 ASN 59 59 59 ASN ASN B . n B 1 60 ALA 60 60 60 ALA ALA B . n B 1 61 GLN 61 61 61 GLN GLN B . n B 1 62 SER 62 62 62 SER SER B . n B 1 63 ASN 63 63 63 ASN ASN B . n B 1 64 THR 64 64 64 THR THR B . n B 1 65 VAL 65 65 65 VAL VAL B . n B 1 66 LYS 66 66 66 LYS LYS B . n B 1 67 VAL 67 67 67 VAL VAL B . n B 1 68 PHE 68 68 68 PHE PHE B . n B 1 69 LYS 69 69 69 LYS LYS B . n B 1 70 ASP 70 70 70 ASP ASP B . n B 1 71 ILE 71 71 71 ILE ILE B . n B 1 72 ASP 72 72 72 ASP ASP B . n B 1 73 ALA 73 73 73 ALA ALA B . n B 1 74 ALA 74 74 74 ALA ALA B . n B 1 75 ILE 75 75 75 ILE ILE B . n B 1 76 ILE 76 76 76 ILE ILE B . n B 1 77 GLN 77 77 77 GLN GLN B . n B 1 78 ASN 78 78 78 ASN ASN B . n B 1 79 PHE 79 79 79 PHE PHE B . n B 1 80 ARG 80 80 80 ARG ARG B . n C 1 1 MET 1 1 1 MET MET C . n C 1 2 ALA 2 2 2 ALA ALA C . n C 1 3 THR 3 3 3 THR THR C . n C 1 4 PRO 4 4 4 PRO PRO C . n C 1 5 TRP 5 5 5 TRP TRP C . n C 1 6 SER 6 6 6 SER SER C . n C 1 7 GLY 7 7 7 GLY GLY C . n C 1 8 TYR 8 8 8 TYR TYR C . n C 1 9 LEU 9 9 9 LEU LEU C . n C 1 10 ASP 10 10 10 ASP ASP C . n C 1 11 ASP 11 11 11 ASP ASP C . n C 1 12 VAL 12 12 12 VAL VAL C . n C 1 13 SER 13 13 13 SER SER C . n C 1 14 ALA 14 14 14 ALA ALA C . n C 1 15 LYS 15 15 15 LYS LYS C . n C 1 16 PHE 16 16 16 PHE PHE C . n C 1 17 ASP 17 17 17 ASP ASP C . n C 1 18 THR 18 18 18 THR THR C . n C 1 19 GLY 19 19 19 GLY GLY C . n C 1 20 VAL 20 20 20 VAL VAL C . n C 1 21 ASP 21 21 21 ASP ASP C . n C 1 22 ASN 22 22 22 ASN ASN C . n C 1 23 LEU 23 23 23 LEU LEU C . n C 1 24 GLN 24 24 24 GLN GLN C . n C 1 25 THR 25 25 25 THR THR C . n C 1 26 GLN 26 26 26 GLN GLN C . n C 1 27 VAL 27 27 27 VAL VAL C . n C 1 28 THR 28 28 28 THR THR C . n C 1 29 GLU 29 29 29 GLU GLU C . n C 1 30 ALA 30 30 30 ALA ALA C . n C 1 31 LEU 31 31 31 LEU LEU C . n C 1 32 ASP 32 32 32 ASP ASP C . n C 1 33 LYS 33 33 33 LYS LYS C . n C 1 34 LEU 34 34 34 LEU LEU C . n C 1 35 ALA 35 35 35 ALA ALA C . n C 1 36 ALA 36 36 36 ALA ALA C . n C 1 37 LYS 37 37 37 LYS LYS C . n C 1 38 PRO 38 38 38 PRO PRO C . n C 1 39 SER 39 39 39 SER SER C . n C 1 40 ASP 40 40 40 ASP ASP C . n C 1 41 PRO 41 41 41 PRO PRO C . n C 1 42 ALA 42 42 42 ALA ALA C . n C 1 43 LEU 43 43 43 LEU LEU C . n C 1 44 LEU 44 44 44 LEU LEU C . n C 1 45 ALA 45 45 45 ALA ALA C . n C 1 46 ALA 46 46 46 ALA ALA C . n C 1 47 TYR 47 47 47 TYR TYR C . n C 1 48 GLN 48 48 48 GLN GLN C . n C 1 49 SER 49 49 49 SER SER C . n C 1 50 LYS 50 50 50 LYS LYS C . n C 1 51 LEU 51 51 51 LEU LEU C . n C 1 52 SER 52 52 52 SER SER C . n C 1 53 GLU 53 53 53 GLU GLU C . n C 1 54 TYR 54 54 54 TYR TYR C . n C 1 55 ASN 55 55 55 ASN ASN C . n C 1 56 LEU 56 56 56 LEU LEU C . n C 1 57 TYR 57 57 57 TYR TYR C . n C 1 58 ARG 58 58 58 ARG ARG C . n C 1 59 ASN 59 59 59 ASN ASN C . n C 1 60 ALA 60 60 60 ALA ALA C . n C 1 61 GLN 61 61 61 GLN GLN C . n C 1 62 SER 62 62 62 SER SER C . n C 1 63 ASN 63 63 63 ASN ASN C . n C 1 64 THR 64 64 64 THR THR C . n C 1 65 VAL 65 65 65 VAL VAL C . n C 1 66 LYS 66 66 66 LYS LYS C . n C 1 67 VAL 67 67 67 VAL VAL C . n C 1 68 PHE 68 68 68 PHE PHE C . n C 1 69 LYS 69 69 69 LYS LYS C . n C 1 70 ASP 70 70 70 ASP ASP C . n C 1 71 ILE 71 71 71 ILE ILE C . n C 1 72 ASP 72 72 72 ASP ASP C . n C 1 73 ALA 73 73 73 ALA ALA C . n C 1 74 ALA 74 74 74 ALA ALA C . n C 1 75 ILE 75 75 75 ILE ILE C . n C 1 76 ILE 76 76 76 ILE ILE C . n C 1 77 GLN 77 77 77 GLN GLN C . n C 1 78 ASN 78 78 78 ASN ASN C . n C 1 79 PHE 79 79 79 PHE PHE C . n C 1 80 ARG 80 80 80 ARG ARG C . n D 1 1 MET 1 1 1 MET MET D . n D 1 2 ALA 2 2 2 ALA ALA D . n D 1 3 THR 3 3 3 THR THR D . n D 1 4 PRO 4 4 4 PRO PRO D . n D 1 5 TRP 5 5 5 TRP TRP D . n D 1 6 SER 6 6 6 SER SER D . n D 1 7 GLY 7 7 7 GLY GLY D . n D 1 8 TYR 8 8 8 TYR TYR D . n D 1 9 LEU 9 9 9 LEU LEU D . n D 1 10 ASP 10 10 10 ASP ASP D . n D 1 11 ASP 11 11 11 ASP ASP D . n D 1 12 VAL 12 12 12 VAL VAL D . n D 1 13 SER 13 13 13 SER SER D . n D 1 14 ALA 14 14 14 ALA ALA D . n D 1 15 LYS 15 15 15 LYS LYS D . n D 1 16 PHE 16 16 16 PHE PHE D . n D 1 17 ASP 17 17 17 ASP ASP D . n D 1 18 THR 18 18 18 THR THR D . n D 1 19 GLY 19 19 19 GLY GLY D . n D 1 20 VAL 20 20 20 VAL VAL D . n D 1 21 ASP 21 21 21 ASP ASP D . n D 1 22 ASN 22 22 22 ASN ASN D . n D 1 23 LEU 23 23 23 LEU LEU D . n D 1 24 GLN 24 24 24 GLN GLN D . n D 1 25 THR 25 25 25 THR THR D . n D 1 26 GLN 26 26 26 GLN GLN D . n D 1 27 VAL 27 27 27 VAL VAL D . n D 1 28 THR 28 28 28 THR THR D . n D 1 29 GLU 29 29 29 GLU GLU D . n D 1 30 ALA 30 30 30 ALA ALA D . n D 1 31 LEU 31 31 31 LEU LEU D . n D 1 32 ASP 32 32 32 ASP ASP D . n D 1 33 LYS 33 33 33 LYS LYS D . n D 1 34 LEU 34 34 34 LEU LEU D . n D 1 35 ALA 35 35 35 ALA ALA D . n D 1 36 ALA 36 36 36 ALA ALA D . n D 1 37 LYS 37 37 37 LYS LYS D . n D 1 38 PRO 38 38 38 PRO PRO D . n D 1 39 SER 39 39 39 SER SER D . n D 1 40 ASP 40 40 40 ASP ASP D . n D 1 41 PRO 41 41 41 PRO PRO D . n D 1 42 ALA 42 42 42 ALA ALA D . n D 1 43 LEU 43 43 43 LEU LEU D . n D 1 44 LEU 44 44 44 LEU LEU D . n D 1 45 ALA 45 45 45 ALA ALA D . n D 1 46 ALA 46 46 46 ALA ALA D . n D 1 47 TYR 47 47 47 TYR TYR D . n D 1 48 GLN 48 48 48 GLN GLN D . n D 1 49 SER 49 49 49 SER SER D . n D 1 50 LYS 50 50 50 LYS LYS D . n D 1 51 LEU 51 51 51 LEU LEU D . n D 1 52 SER 52 52 52 SER SER D . n D 1 53 GLU 53 53 53 GLU GLU D . n D 1 54 TYR 54 54 54 TYR TYR D . n D 1 55 ASN 55 55 55 ASN ASN D . n D 1 56 LEU 56 56 56 LEU LEU D . n D 1 57 TYR 57 57 57 TYR TYR D . n D 1 58 ARG 58 58 58 ARG ARG D . n D 1 59 ASN 59 59 59 ASN ASN D . n D 1 60 ALA 60 60 60 ALA ALA D . n D 1 61 GLN 61 61 61 GLN GLN D . n D 1 62 SER 62 62 62 SER SER D . n D 1 63 ASN 63 63 63 ASN ASN D . n D 1 64 THR 64 64 64 THR THR D . n D 1 65 VAL 65 65 65 VAL VAL D . n D 1 66 LYS 66 66 66 LYS LYS D . n D 1 67 VAL 67 67 67 VAL VAL D . n D 1 68 PHE 68 68 68 PHE PHE D . n D 1 69 LYS 69 69 69 LYS LYS D . n D 1 70 ASP 70 70 70 ASP ASP D . n D 1 71 ILE 71 71 71 ILE ILE D . n D 1 72 ASP 72 72 72 ASP ASP D . n D 1 73 ALA 73 73 73 ALA ALA D . n D 1 74 ALA 74 74 74 ALA ALA D . n D 1 75 ILE 75 75 75 ILE ILE D . n D 1 76 ILE 76 76 76 ILE ILE D . n D 1 77 GLN 77 77 77 GLN GLN D . n D 1 78 ASN 78 78 78 ASN ASN D . n D 1 79 PHE 79 79 79 PHE PHE D . n D 1 80 ARG 80 80 80 ARG ARG D . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-12-25 2 'Structure model' 1 1 2014-01-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' 'Experimental preparation' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id PrgI-1 10 ? mg/mL '[U-100% 13C; U-100% 15N]' 1 PrgI-2 10 ? mg/mL '[1;3-13C]glycerol [U-100% 15N]' 1 PrgI-3 10 ? mg/mL '[2-13C]glycerol [U-100% 15N]' 1 PrgI-4 10 ? mg/mL '[1-13C]glucose [U-100% 15N]' 1 PrgI-5 10 ? mg/mL '[2-13C]glucose [U-100% 15N]' 1 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 79 ? ? -68.60 91.39 2 1 VAL D 20 ? ? -99.47 32.28 3 1 PRO D 38 ? ? -52.58 -76.92 4 2 PRO C 38 ? ? -53.21 -74.29 5 2 PRO D 38 ? ? -62.06 -74.26 6 3 PRO D 38 ? ? -73.79 -72.77 7 4 PHE A 79 ? ? -56.65 -83.75 8 4 PHE B 79 ? ? -62.48 -85.49 9 4 ASP C 21 ? ? -84.12 30.44 10 4 ASN C 22 ? ? -145.57 -49.22 11 4 PHE C 79 ? ? -53.26 -83.11 12 4 PRO D 38 ? ? -67.97 -73.40 13 4 PHE D 79 ? ? -59.90 -85.82 14 5 VAL A 20 ? ? -99.03 31.19 15 5 PHE A 79 ? ? -66.18 -82.50 16 5 PRO C 38 ? ? -53.46 -72.96 17 5 PHE C 79 ? ? -84.56 -85.39 18 5 PRO D 38 ? ? -67.49 -75.01 19 6 PHE A 79 ? ? -66.95 28.67 20 6 PRO C 38 ? ? -59.63 -73.06 21 6 PHE C 79 ? ? -72.00 28.91 22 6 PRO D 38 ? ? -63.51 -74.83 23 6 PHE D 79 ? ? -77.80 29.82 24 7 PRO C 38 ? ? -46.73 -72.59 25 7 PRO D 38 ? ? -48.11 -74.43 26 8 VAL B 20 ? ? -97.17 31.34 27 8 PRO D 38 ? ? -61.06 -73.99 28 9 PRO A 38 ? ? -62.48 -72.63 29 9 PRO D 38 ? ? -69.00 -74.54 30 10 PHE A 79 ? ? -54.03 -84.52 31 10 PHE B 79 ? ? -54.15 -85.56 32 10 PRO C 38 ? ? -59.41 -73.83 33 10 PHE C 79 ? ? -53.61 -85.63 34 10 PRO D 38 ? ? -58.47 -73.63 35 10 PHE D 79 ? ? -58.40 -86.45 36 11 PRO C 38 ? ? -42.72 -72.66 37 11 PRO D 38 ? ? -55.09 -73.51 38 12 PHE A 79 ? ? -55.24 -84.54 39 12 PHE B 79 ? ? -62.32 -84.77 40 12 PRO C 38 ? ? -48.67 -71.51 41 12 PHE C 79 ? ? -52.80 -83.01 42 12 PRO D 38 ? ? -65.35 -77.91 43 12 PHE D 79 ? ? -61.54 -85.38 44 13 PRO C 38 ? ? -40.77 -73.50 45 14 PHE A 79 ? ? -69.41 87.76 46 14 PRO C 38 ? ? -54.39 -70.99 47 14 PHE C 79 ? ? -67.78 97.30 48 14 PRO D 38 ? ? -57.32 -74.64 49 15 PRO C 38 ? ? -47.83 -72.99 50 15 PRO D 38 ? ? -65.96 -73.01 #