HEADER HYDROLASE 19-NOV-13 2MH9 TITLE RESONANCE ASSIGNMENT OF RQC DOMAIN OF HUMAN BLOOM SYNDROME PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: BLOOM SYNDROME PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1067-1210; COMPND 5 SYNONYM: DNA HELICASE, RECQ-LIKE TYPE 2, RECQ2, RECQ PROTEIN-LIKE 3; COMPND 6 EC: 3.6.4.12; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BLM, RECQ2, RECQL3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET15B KEYWDS WINGED HELIX, RQC, HYDROLASE EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR J.KO,K.S.RYU,B.S.CHOI REVDAT 3 15-MAY-24 2MH9 1 REMARK REVDAT 2 14-JUN-23 2MH9 1 REMARK REVDAT 1 29-OCT-14 2MH9 0 JRNL AUTH C.J.PARK,J.KO,K.S.RYU,B.S.CHOI JRNL TITL SOLUTION STRUCTURE OF THE RECQ C-TERMINAL DOMAIN OF HUMAN JRNL TITL 2 BLOOM SYNDROME PROTEIN. JRNL REF J.BIOMOL.NMR V. 58 141 2014 JRNL REFN ISSN 0925-2738 JRNL PMID 24435566 JRNL DOI 10.1007/S10858-014-9812-8 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SPARKY, CNS REMARK 3 AUTHORS : GODDARD (SPARKY), REMARK 3 BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-KUNSTLEVE,JIANG,KUSZEWSKI, REMARK 3 NILGES, PANNU,READ,RICE,SIMONSON,WARREN (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MH9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-DEC-13. REMARK 100 THE DEPOSITION ID IS D_1000103615. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 300 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 0.1 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.8 MM [U-99% 13C; U-99% 15N] REMARK 210 BLM RQC-1, 90 % H2O-2, 10 % D2O- REMARK 210 3, 1 MM DTT-4, 20 MM TRIS-5, 100 REMARK 210 MM SODIUM CHLORIDE-6, 90% H2O/10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D CBCA(CO)NH; 3D HNCACB; 3D REMARK 210 HNCO; 3D HBHA(CO)NH; 3D HCCH- REMARK 210 TOCSY; 3D 1H-15N NOESY; 3D 1H- REMARK 210 13C NOESY; 3D 1H-13C NOESY REMARK 210 AROMATIC; 3D C(CO)NH REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-10 REMARK 465 RES C SSSEQI REMARK 465 ASN A 128 REMARK 465 SER A 129 REMARK 465 SER A 130 REMARK 465 SER A 131 REMARK 465 VAL A 132 REMARK 465 LYS A 133 REMARK 465 LYS A 134 REMARK 465 GLN A 135 REMARK 465 LYS A 136 REMARK 465 ALA A 137 REMARK 465 LEU A 138 REMARK 465 VAL A 139 REMARK 465 ALA A 140 REMARK 465 LYS A 141 REMARK 465 VAL A 142 REMARK 465 SER A 143 REMARK 465 GLN A 144 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 2 95.10 -62.46 REMARK 500 1 THR A 3 -27.72 163.19 REMARK 500 1 HIS A 25 34.91 -78.73 REMARK 500 1 ASN A 33 -70.05 54.91 REMARK 500 1 ILE A 34 -78.27 -31.77 REMARK 500 1 ILE A 64 29.06 -70.95 REMARK 500 1 LYS A 87 18.73 84.89 REMARK 500 1 ALA A 97 21.72 -67.90 REMARK 500 1 GLU A 125 -146.25 -133.91 REMARK 500 2 THR A 3 85.58 67.87 REMARK 500 2 LYS A 4 -42.45 -135.04 REMARK 500 2 HIS A 25 35.93 -81.82 REMARK 500 2 GLN A 29 -43.23 70.40 REMARK 500 2 ASN A 33 97.78 59.76 REMARK 500 2 LYS A 35 80.10 40.66 REMARK 500 2 ILE A 64 31.02 -75.90 REMARK 500 2 LYS A 87 15.61 84.75 REMARK 500 2 ASN A 118 24.22 -79.17 REMARK 500 2 GLU A 125 -72.80 -43.56 REMARK 500 3 LYS A 7 -160.13 -175.43 REMARK 500 3 SER A 28 -166.76 -171.35 REMARK 500 3 MET A 31 18.47 -61.72 REMARK 500 3 PRO A 39 99.45 -19.53 REMARK 500 3 SER A 40 -178.08 57.94 REMARK 500 3 LYS A 87 23.52 85.51 REMARK 500 3 ALA A 97 18.21 -66.44 REMARK 500 3 ASN A 118 32.64 -95.98 REMARK 500 4 SER A 28 89.92 70.40 REMARK 500 4 ASN A 33 -168.25 49.07 REMARK 500 4 ILE A 34 -60.20 -131.12 REMARK 500 4 SER A 40 -179.86 -176.62 REMARK 500 4 ALA A 58 107.19 -51.59 REMARK 500 4 SER A 62 -80.13 -145.97 REMARK 500 4 ILE A 64 9.71 48.55 REMARK 500 4 LYS A 87 13.45 83.96 REMARK 500 4 ALA A 97 26.40 -67.80 REMARK 500 5 SER A 28 130.77 74.42 REMARK 500 5 GLN A 29 -70.15 -127.94 REMARK 500 5 ASN A 33 -159.44 -113.72 REMARK 500 5 ARG A 42 -108.34 62.06 REMARK 500 5 GLN A 61 -7.73 67.22 REMARK 500 5 ILE A 64 14.92 49.45 REMARK 500 5 LYS A 87 27.71 84.78 REMARK 500 5 GLU A 125 -150.17 -87.87 REMARK 500 6 THR A 3 146.00 -178.59 REMARK 500 6 TYR A 6 24.34 -145.81 REMARK 500 6 LYS A 7 -157.67 -110.87 REMARK 500 6 THR A 12 -50.41 -121.01 REMARK 500 6 MET A 31 -79.18 -42.65 REMARK 500 6 ARG A 32 -74.96 -91.72 REMARK 500 REMARK 500 THIS ENTRY HAS 102 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 7 ARG A 20 0.09 SIDE CHAIN REMARK 500 8 ARG A 9 0.11 SIDE CHAIN REMARK 500 10 ARG A 42 0.11 SIDE CHAIN REMARK 500 10 ARG A 78 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 19530 RELATED DB: BMRB DBREF 2MH9 A 1 144 UNP P54132 BLM_HUMAN 1067 1210 SEQRES 1 A 144 CYS LYS THR LYS ASP TYR LYS THR ARG ASP VAL THR ASP SEQRES 2 A 144 ASP VAL LYS SER ILE VAL ARG PHE VAL GLN GLU HIS SER SEQRES 3 A 144 SER SER GLN GLY MET ARG ASN ILE LYS HIS VAL GLY PRO SEQRES 4 A 144 SER GLY ARG PHE THR MET ASN MET LEU VAL ASP ILE PHE SEQRES 5 A 144 LEU GLY SER LYS SER ALA LYS ILE GLN SER GLY ILE PHE SEQRES 6 A 144 GLY LYS GLY SER ALA TYR SER ARG HIS ASN ALA GLU ARG SEQRES 7 A 144 LEU PHE LYS LYS LEU ILE LEU ASP LYS ILE LEU ASP GLU SEQRES 8 A 144 ASP LEU TYR ILE ASN ALA ASN ASP GLN ALA ILE ALA TYR SEQRES 9 A 144 VAL MET LEU GLY ASN LYS ALA GLN THR VAL LEU ASN GLY SEQRES 10 A 144 ASN LEU LYS VAL ASP PHE MET GLU THR GLU ASN SER SER SEQRES 11 A 144 SER VAL LYS LYS GLN LYS ALA LEU VAL ALA LYS VAL SER SEQRES 12 A 144 GLN HELIX 1 1 THR A 12 HIS A 25 1 14 HELIX 2 2 GLN A 29 ASN A 33 5 5 HELIX 3 3 THR A 44 GLY A 54 1 11 HELIX 4 4 SER A 72 ASP A 86 1 15 HELIX 5 5 LYS A 110 GLY A 117 1 8 SHEET 1 A 2 ARG A 9 ASP A 10 0 SHEET 2 A 2 ASP A 122 PHE A 123 -1 O PHE A 123 N ARG A 9 SHEET 1 B 2 ASP A 90 ILE A 95 0 SHEET 2 B 2 ALA A 101 MET A 106 -1 O ILE A 102 N TYR A 94 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1