data_2MHC # _entry.id 2MHC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2MHC pdb_00002mhc 10.2210/pdb2mhc/pdb RCSB RCSB103616 ? ? BMRB 19625 ? ? WWPDB D_1000103616 ? ? # _pdbx_database_related.db_id 19625 _pdbx_database_related.db_name BMRB _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2MHC _pdbx_database_status.methods_development_category ? _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2013-11-20 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Headey, S.J.' 1 'Sivakumaran, A.' 2 'Adams, V.' 3 'Rodgers, A.J.W.' 4 'Rood, J.I.' 5 'Scanlon, M.J.' 6 'Wilce, M.C.J.' 7 # _citation.id primary _citation.title 'Solution Structure and DNA Binding of the Catalytic of the Large Serine Resolvase Tnpx' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Headey, S.J.' 1 ? primary 'Sivakumaran, A.' 2 ? primary 'Adams, V.' 3 ? primary 'Rodgers, A.J.W.' 4 ? primary 'Scanlon, J.I.' 5 ? primary 'Wilce, M.C.J.' 6 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description TnpX _entity.formula_weight 13793.226 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'UNP residues 2-120' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSRTSRITALYERLSRDDDLTGESNSITNQKKYLEDYARRNGFENIRHFTDDGFSGVNFNRPGFQSLIKEVEAGNVETLI VKDMSRLGRNYLQVGFYTEVLFPQKNVRFLAINNSIDSNN ; _entity_poly.pdbx_seq_one_letter_code_can ;GSRTSRITALYERLSRDDDLTGESNSITNQKKYLEDYARRNGFENIRHFTDDGFSGVNFNRPGFQSLIKEVEAGNVETLI VKDMSRLGRNYLQVGFYTEVLFPQKNVRFLAINNSIDSNN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 ARG n 1 4 THR n 1 5 SER n 1 6 ARG n 1 7 ILE n 1 8 THR n 1 9 ALA n 1 10 LEU n 1 11 TYR n 1 12 GLU n 1 13 ARG n 1 14 LEU n 1 15 SER n 1 16 ARG n 1 17 ASP n 1 18 ASP n 1 19 ASP n 1 20 LEU n 1 21 THR n 1 22 GLY n 1 23 GLU n 1 24 SER n 1 25 ASN n 1 26 SER n 1 27 ILE n 1 28 THR n 1 29 ASN n 1 30 GLN n 1 31 LYS n 1 32 LYS n 1 33 TYR n 1 34 LEU n 1 35 GLU n 1 36 ASP n 1 37 TYR n 1 38 ALA n 1 39 ARG n 1 40 ARG n 1 41 ASN n 1 42 GLY n 1 43 PHE n 1 44 GLU n 1 45 ASN n 1 46 ILE n 1 47 ARG n 1 48 HIS n 1 49 PHE n 1 50 THR n 1 51 ASP n 1 52 ASP n 1 53 GLY n 1 54 PHE n 1 55 SER n 1 56 GLY n 1 57 VAL n 1 58 ASN n 1 59 PHE n 1 60 ASN n 1 61 ARG n 1 62 PRO n 1 63 GLY n 1 64 PHE n 1 65 GLN n 1 66 SER n 1 67 LEU n 1 68 ILE n 1 69 LYS n 1 70 GLU n 1 71 VAL n 1 72 GLU n 1 73 ALA n 1 74 GLY n 1 75 ASN n 1 76 VAL n 1 77 GLU n 1 78 THR n 1 79 LEU n 1 80 ILE n 1 81 VAL n 1 82 LYS n 1 83 ASP n 1 84 MET n 1 85 SER n 1 86 ARG n 1 87 LEU n 1 88 GLY n 1 89 ARG n 1 90 ASN n 1 91 TYR n 1 92 LEU n 1 93 GLN n 1 94 VAL n 1 95 GLY n 1 96 PHE n 1 97 TYR n 1 98 THR n 1 99 GLU n 1 100 VAL n 1 101 LEU n 1 102 PHE n 1 103 PRO n 1 104 GLN n 1 105 LYS n 1 106 ASN n 1 107 VAL n 1 108 ARG n 1 109 PHE n 1 110 LEU n 1 111 ALA n 1 112 ILE n 1 113 ASN n 1 114 ASN n 1 115 SER n 1 116 ILE n 1 117 ASP n 1 118 SER n 1 119 ASN n 1 120 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'TN4451, tnpX' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Clostridium perfringens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1502 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant C43 _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type VECTOR _entity_src_gen.pdbx_host_org_vector PGEX4T2 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code O05415_CLOPF _struct_ref.pdbx_db_accession O05415 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SRTSRITALYERLSRDDDLTGESNSITNQKKYLEDYARRNGFENIRHFTDDGFSGVNFNRPGFQSLIKEVEAGNVETLIV KDMSRLGRNYLQVGFYTEVLFPQKNVRFLAINNSIDSNN ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2MHC _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 120 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O05415 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 120 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 120 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2MHC _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code O05415 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 1 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '2D 1H-13C HSQC' 1 3 1 '3D HNCACB' 1 4 1 '3D HNCO' 1 5 1 '3D HN(CA)CO 3D CBCA(CO)NH' 1 6 1 '3D H(CCO)NH' 1 7 1 '3D H(CCO)NH' 1 8 1 '3D HCCH-TOCSY' 1 9 1 '2D (HB)CB(CGCD)HD' 1 10 1 '3D (H)CCH-TOCSY 2D (HB)CB(CGCDCE)HE' 1 11 1 '3D 1H-15N NOESY' 1 12 1 '3D 1H-13C NOESY' 1 13 1 '2D 1H-1 NOESY' 1 14 1 '2D 1H-15N NOE' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 150 _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.pressure ? _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents '0.4mM [U-99% 13C; U-99% 15N] TNPX-1, 10% D2O-2, 150mM sodium chloride-3, 20mM sodium phosphate-4, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'VARIAN INOVA' # _pdbx_nmr_refine.entry_id 2MHC _pdbx_nmr_refine.method 'TORSION ANGLE DYNAMICS, SIMULATED ANNEALING, SIMULATED ANNEALING' _pdbx_nmr_refine.details 'FROM EXTENDED CONFORMER, FROM FOLDED CONFORMER, IN TIP3 WATER' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'STRUCTURES WITH THE LOWEST ENER' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2MHC _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.representative_conformer 1 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2MHC _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.ordinal _pdbx_nmr_software.version 'BRUNGER, ADAMS, CLORE, GROS, NILGES' refinement CNSSOLVE 1 1.2 'Bartels et al.' 'structure solution' XEASY 2 1.4 'Bruker Biospin' processing TopSpin 3 ? Varian collection VnmrJ 4 ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2MHC _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2MHC _struct.title 'NMR structure of the catalytic domain of the large serine resolvase TnpX' _struct.pdbx_model_details 'lowest energy, model1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2MHC _struct_keywords.pdbx_keywords RECOMBINATION _struct_keywords.text 'SERINE RESOLVASE, RECOMBINATION' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ILE A 27 ? GLY A 42 ? ILE A 27 GLY A 42 1 ? 16 HELX_P HELX_P2 2 ARG A 61 ? GLY A 74 ? ARG A 61 GLY A 74 1 ? 14 HELX_P HELX_P3 3 ASN A 90 ? VAL A 100 ? ASN A 90 VAL A 100 1 ? 11 HELX_P HELX_P4 4 LEU A 101 ? ASN A 106 ? LEU A 101 ASN A 106 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 46 ? PHE A 49 ? ILE A 46 PHE A 49 A 2 ILE A 7 ? TYR A 11 ? ILE A 7 TYR A 11 A 3 VAL A 76 ? VAL A 81 ? VAL A 76 VAL A 81 A 4 PHE A 109 ? ALA A 111 ? PHE A 109 ALA A 111 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE A 49 ? O PHE A 49 N LEU A 10 ? N LEU A 10 A 2 3 N ALA A 9 ? N ALA A 9 O ILE A 80 ? O ILE A 80 A 3 4 N LEU A 79 ? N LEU A 79 O LEU A 110 ? O LEU A 110 # _atom_sites.entry_id 2MHC _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 ARG 3 3 3 ARG ARG A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 ARG 6 6 6 ARG ARG A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 TYR 11 11 11 TYR TYR A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 ARG 13 13 13 ARG ARG A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 ARG 16 16 16 ARG ARG A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 ASP 18 18 18 ASP ASP A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 THR 21 21 21 THR THR A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 ASN 25 25 25 ASN ASN A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 ILE 27 27 27 ILE ILE A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 ASN 29 29 29 ASN ASN A . n A 1 30 GLN 30 30 30 GLN GLN A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 TYR 33 33 33 TYR TYR A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 TYR 37 37 37 TYR TYR A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 ASN 41 41 41 ASN ASN A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 PHE 43 43 43 PHE PHE A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 ASN 45 45 45 ASN ASN A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 ARG 47 47 47 ARG ARG A . n A 1 48 HIS 48 48 48 HIS HIS A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 PHE 54 54 54 PHE PHE A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 ASN 58 58 58 ASN ASN A . n A 1 59 PHE 59 59 59 PHE PHE A . n A 1 60 ASN 60 60 60 ASN ASN A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 PRO 62 62 62 PRO PRO A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 PHE 64 64 64 PHE PHE A . n A 1 65 GLN 65 65 65 GLN GLN A . n A 1 66 SER 66 66 66 SER SER A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 ILE 68 68 68 ILE ILE A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 GLU 70 70 70 GLU GLU A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 GLU 72 72 72 GLU GLU A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 ASN 75 75 75 ASN ASN A . n A 1 76 VAL 76 76 76 VAL VAL A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 THR 78 78 78 THR THR A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 ILE 80 80 80 ILE ILE A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 LYS 82 82 82 LYS LYS A . n A 1 83 ASP 83 83 83 ASP ASP A . n A 1 84 MET 84 84 84 MET MET A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 ARG 86 86 86 ARG ARG A . n A 1 87 LEU 87 87 87 LEU LEU A . n A 1 88 GLY 88 88 88 GLY GLY A . n A 1 89 ARG 89 89 89 ARG ARG A . n A 1 90 ASN 90 90 90 ASN ASN A . n A 1 91 TYR 91 91 91 TYR TYR A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 GLN 93 93 93 GLN GLN A . n A 1 94 VAL 94 94 94 VAL VAL A . n A 1 95 GLY 95 95 95 GLY GLY A . n A 1 96 PHE 96 96 96 PHE PHE A . n A 1 97 TYR 97 97 97 TYR TYR A . n A 1 98 THR 98 98 98 THR THR A . n A 1 99 GLU 99 99 99 GLU GLU A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 LEU 101 101 101 LEU LEU A . n A 1 102 PHE 102 102 102 PHE PHE A . n A 1 103 PRO 103 103 103 PRO PRO A . n A 1 104 GLN 104 104 104 GLN GLN A . n A 1 105 LYS 105 105 105 LYS LYS A . n A 1 106 ASN 106 106 106 ASN ASN A . n A 1 107 VAL 107 107 107 VAL VAL A . n A 1 108 ARG 108 108 108 ARG ARG A . n A 1 109 PHE 109 109 109 PHE PHE A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 ILE 112 112 112 ILE ILE A . n A 1 113 ASN 113 113 113 ASN ASN A . n A 1 114 ASN 114 114 114 ASN ASN A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 ILE 116 116 116 ILE ILE A . n A 1 117 ASP 117 117 117 ASP ASP A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 ASN 119 119 119 ASN ASN A . n A 1 120 ASN 120 120 120 ASN ASN A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-11-26 2 'Structure model' 1 1 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' database_2 2 2 'Structure model' pdbx_database_status 3 2 'Structure model' pdbx_nmr_software 4 2 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 2 'Structure model' '_pdbx_nmr_software.name' 5 2 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id TNPX-1 0.4 ? mM '[U-99% 13C; U-99% 15N]' 1 D2O-2 10 ? % ? 1 'sodium chloride-3' 150 ? mM ? 1 'sodium phosphate-4' 20 ? mM ? 1 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A TYR 97 ? ? H A PHE 102 ? ? 1.59 2 1 O A ALA 9 ? ? H A ILE 80 ? ? 1.60 3 2 O A ALA 9 ? ? H A ILE 80 ? ? 1.58 4 2 O A ARG 61 ? ? H A GLN 65 ? ? 1.58 5 2 O A ILE 7 ? ? H A GLU 77 ? ? 1.59 6 2 O A LEU 10 ? ? H A PHE 49 ? ? 1.59 7 3 O A ALA 9 ? ? H A ILE 80 ? ? 1.57 8 4 O A LEU 10 ? ? H A PHE 49 ? ? 1.57 9 4 O A TYR 97 ? ? H A PHE 102 ? ? 1.59 10 4 O A ARG 61 ? ? H A GLN 65 ? ? 1.60 11 5 O A TYR 97 ? ? H A PHE 102 ? ? 1.59 12 5 O A ARG 61 ? ? H A GLN 65 ? ? 1.60 13 5 O A ALA 9 ? ? H A ILE 80 ? ? 1.60 14 6 O A TYR 97 ? ? H A PHE 102 ? ? 1.59 15 6 O A ILE 7 ? ? H A GLU 77 ? ? 1.59 16 7 O A ARG 61 ? ? H A GLN 65 ? ? 1.59 17 8 O A LEU 10 ? ? H A PHE 49 ? ? 1.59 18 9 O A LEU 10 ? ? H A PHE 49 ? ? 1.59 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 2 ? ? -122.23 -61.27 2 1 ARG A 6 ? ? -81.50 -151.39 3 1 LEU A 20 ? ? -56.17 -70.76 4 1 THR A 21 ? ? 62.20 94.97 5 1 GLU A 23 ? ? -90.51 -62.35 6 1 SER A 24 ? ? -67.32 4.02 7 1 ASN A 25 ? ? -90.05 44.85 8 1 SER A 26 ? ? -156.59 -98.10 9 1 ILE A 27 ? ? -172.41 -69.45 10 1 ASN A 45 ? ? 48.68 29.78 11 1 ILE A 46 ? ? -52.86 100.66 12 1 ASP A 52 ? ? -163.83 108.87 13 1 ASN A 58 ? ? -179.59 -100.93 14 1 PHE A 59 ? ? -116.76 -162.59 15 1 ASN A 60 ? ? 68.94 76.13 16 1 PRO A 62 ? ? -56.15 -73.62 17 1 ASN A 75 ? ? -123.50 -52.39 18 1 VAL A 76 ? ? -57.53 89.81 19 1 ASN A 90 ? ? -63.45 79.88 20 1 ASN A 106 ? ? 59.36 87.73 21 1 ASN A 113 ? ? -94.96 35.89 22 1 ASN A 114 ? ? 175.14 146.14 23 1 ASP A 117 ? ? -169.47 30.14 24 2 SER A 2 ? ? -160.20 -80.02 25 2 THR A 4 ? ? 69.31 137.40 26 2 SER A 5 ? ? 67.01 142.97 27 2 ARG A 6 ? ? -108.56 -141.41 28 2 SER A 26 ? ? -164.06 23.26 29 2 ILE A 27 ? ? 61.23 -82.66 30 2 ILE A 46 ? ? -57.54 99.17 31 2 ASN A 58 ? ? 169.76 -112.25 32 2 ASN A 60 ? ? 83.31 78.11 33 2 PRO A 62 ? ? -55.61 -72.01 34 2 ASN A 90 ? ? -59.29 90.39 35 2 ASN A 106 ? ? 64.73 103.58 36 2 ASP A 117 ? ? -175.68 -41.07 37 2 ASN A 119 ? ? -165.92 -159.09 38 3 SER A 2 ? ? 70.82 110.71 39 3 ARG A 3 ? ? -171.13 -63.70 40 3 THR A 4 ? ? -127.06 -60.35 41 3 SER A 5 ? ? 65.39 95.33 42 3 ARG A 6 ? ? -71.23 -152.37 43 3 ASP A 18 ? ? 30.22 50.95 44 3 LEU A 20 ? ? -134.72 -44.98 45 3 THR A 21 ? ? 66.45 145.19 46 3 SER A 26 ? ? -173.21 126.03 47 3 ILE A 46 ? ? -50.98 96.71 48 3 ASP A 52 ? ? -160.73 109.28 49 3 ASN A 58 ? ? 153.36 125.64 50 3 PHE A 59 ? ? 39.76 -159.15 51 3 ASN A 60 ? ? 58.76 91.02 52 3 PRO A 62 ? ? -55.58 -71.76 53 3 VAL A 76 ? ? -62.06 91.25 54 3 ASN A 90 ? ? -54.15 89.62 55 3 ASN A 106 ? ? 67.88 105.32 56 3 ASN A 114 ? ? 168.79 163.16 57 3 ASP A 117 ? ? -172.48 -53.33 58 3 ASN A 119 ? ? -160.42 -62.43 59 4 ARG A 3 ? ? -125.73 -76.59 60 4 SER A 5 ? ? 70.85 109.44 61 4 ARG A 6 ? ? -68.61 -152.10 62 4 ASP A 18 ? ? 35.43 52.66 63 4 THR A 21 ? ? 51.37 84.27 64 4 ASN A 25 ? ? -91.56 50.32 65 4 SER A 26 ? ? -168.97 115.95 66 4 ILE A 46 ? ? -54.44 101.05 67 4 ASP A 52 ? ? -164.75 112.52 68 4 ASN A 58 ? ? 168.85 -98.00 69 4 PHE A 59 ? ? -114.46 -168.59 70 4 ASN A 60 ? ? 72.52 88.37 71 4 VAL A 76 ? ? -62.49 92.21 72 4 MET A 84 ? ? -65.93 1.88 73 4 ASN A 90 ? ? -67.72 80.95 74 4 ASN A 106 ? ? 53.49 74.65 75 4 ASN A 114 ? ? 168.26 161.82 76 4 ASP A 117 ? ? -163.20 -60.92 77 4 SER A 118 ? ? 73.32 -163.84 78 4 ASN A 119 ? ? -64.82 -174.62 79 5 ARG A 6 ? ? -70.81 -152.73 80 5 ASP A 18 ? ? 33.65 55.27 81 5 THR A 21 ? ? 54.08 115.13 82 5 SER A 26 ? ? 170.26 -86.41 83 5 ILE A 27 ? ? 160.39 -55.62 84 5 ASN A 45 ? ? 72.76 -39.66 85 5 ILE A 46 ? ? 18.72 88.78 86 5 ASN A 58 ? ? 174.45 -101.68 87 5 PHE A 59 ? ? -115.22 -162.48 88 5 ASN A 60 ? ? 67.89 75.55 89 5 VAL A 76 ? ? -64.82 84.07 90 5 ASN A 90 ? ? -57.64 90.37 91 5 PRO A 103 ? ? -39.66 -32.05 92 5 ASN A 106 ? ? 55.96 86.26 93 5 ASN A 113 ? ? -91.54 36.06 94 5 ASN A 114 ? ? 169.11 175.70 95 5 ASP A 117 ? ? -174.66 -37.44 96 6 SER A 2 ? ? -148.60 -85.72 97 6 ARG A 3 ? ? -148.07 -70.50 98 6 SER A 5 ? ? -156.77 88.93 99 6 ARG A 6 ? ? -73.46 -159.16 100 6 ASN A 25 ? ? -105.26 72.11 101 6 SER A 26 ? ? -160.41 13.83 102 6 ILE A 27 ? ? 62.39 -78.73 103 6 ILE A 46 ? ? -56.55 95.83 104 6 ASP A 52 ? ? -164.84 108.76 105 6 ASN A 58 ? ? 173.01 -138.01 106 6 PHE A 59 ? ? -78.97 -166.42 107 6 ASN A 60 ? ? 68.46 88.62 108 6 PRO A 62 ? ? -55.11 -78.09 109 6 ASN A 75 ? ? -126.98 -62.93 110 6 VAL A 76 ? ? -48.29 97.12 111 6 ASN A 90 ? ? -66.40 77.88 112 6 ASN A 106 ? ? 67.86 108.23 113 6 ASN A 113 ? ? -81.13 31.81 114 6 ASN A 114 ? ? 171.81 -174.95 115 6 ASP A 117 ? ? -176.44 34.36 116 7 SER A 2 ? ? -137.29 -60.14 117 7 THR A 4 ? ? -169.19 -165.02 118 7 ARG A 6 ? ? -76.94 -157.23 119 7 THR A 21 ? ? -161.91 113.07 120 7 SER A 26 ? ? -176.93 130.07 121 7 ILE A 46 ? ? -54.02 97.08 122 7 ASP A 52 ? ? -160.90 108.71 123 7 ASN A 58 ? ? 144.82 119.67 124 7 PHE A 59 ? ? 44.54 -165.95 125 7 ASN A 60 ? ? 59.99 90.48 126 7 PRO A 62 ? ? -55.01 -73.26 127 7 VAL A 76 ? ? -60.22 95.80 128 7 ASN A 90 ? ? -69.81 80.80 129 7 ASN A 106 ? ? 62.04 94.18 130 7 ASN A 113 ? ? -78.97 36.01 131 7 ASN A 114 ? ? 166.03 177.25 132 7 ASP A 117 ? ? -171.35 40.14 133 7 ASN A 119 ? ? -154.46 -71.06 134 8 SER A 2 ? ? 74.00 146.32 135 8 ARG A 6 ? ? -70.58 -155.67 136 8 THR A 21 ? ? 57.48 177.99 137 8 ASN A 25 ? ? -102.57 66.16 138 8 SER A 26 ? ? -172.64 131.35 139 8 ILE A 46 ? ? -54.14 97.37 140 8 ASN A 58 ? ? 61.85 119.30 141 8 PHE A 59 ? ? 58.36 -177.41 142 8 PRO A 62 ? ? -59.62 -76.09 143 8 VAL A 76 ? ? -61.57 80.71 144 8 ASN A 90 ? ? -64.01 89.02 145 8 PRO A 103 ? ? -39.79 -30.53 146 8 ASN A 106 ? ? 52.13 79.89 147 8 ASN A 113 ? ? -95.77 35.90 148 8 ASN A 114 ? ? 165.88 163.72 149 8 ASP A 117 ? ? -154.08 -64.27 150 8 SER A 118 ? ? 75.93 118.30 151 9 SER A 2 ? ? -136.39 -69.14 152 9 ARG A 3 ? ? -159.18 -78.29 153 9 THR A 4 ? ? -173.02 -175.39 154 9 SER A 5 ? ? 76.41 110.21 155 9 ARG A 6 ? ? -89.63 -147.54 156 9 ASP A 18 ? ? 39.56 59.48 157 9 THR A 21 ? ? 51.65 89.80 158 9 ASN A 25 ? ? -95.35 37.32 159 9 ILE A 46 ? ? -55.82 96.14 160 9 ASP A 52 ? ? -164.30 108.97 161 9 ASN A 58 ? ? 62.33 104.53 162 9 PHE A 59 ? ? 63.84 -177.79 163 9 PRO A 62 ? ? -57.09 -77.25 164 9 VAL A 76 ? ? -57.14 105.68 165 9 ASN A 90 ? ? -68.94 82.61 166 9 ASN A 106 ? ? 60.28 94.23 167 9 ASP A 117 ? ? -175.01 -36.33 168 9 ASN A 119 ? ? -75.46 -156.18 169 10 SER A 2 ? ? -136.84 -66.86 170 10 THR A 4 ? ? -162.40 -47.06 171 10 ARG A 6 ? ? -95.37 -136.26 172 10 LEU A 20 ? ? -80.12 -84.90 173 10 THR A 21 ? ? 66.54 129.65 174 10 SER A 26 ? ? -173.65 26.24 175 10 ILE A 27 ? ? 60.60 -83.87 176 10 ILE A 46 ? ? -51.65 98.24 177 10 ASP A 52 ? ? -161.97 109.02 178 10 ASN A 58 ? ? 81.71 -85.91 179 10 ASN A 60 ? ? 70.27 85.26 180 10 PRO A 62 ? ? -53.95 -70.15 181 10 VAL A 76 ? ? -59.77 104.60 182 10 ASN A 90 ? ? -55.41 96.02 183 10 ASN A 106 ? ? 63.45 95.47 184 10 ASP A 117 ? ? -167.21 -41.89 #