HEADER BLOOD CLOTTING 02-DEC-13 2MHP TITLE SOLUTION STRUCTURE OF THE MAJOR FACTOR VIII BINDING REGION ON VON TITLE 2 WILLEBRAND FACTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: VON WILLEBRAND FACTOR; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: DOMAINS TIL' AND E', UNP RESIDUES 766-864; COMPND 5 SYNONYM: VWF, VON WILLEBRAND ANTIGEN 2, VON WILLEBRAND ANTIGEN II; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: VWF, F8VWF; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: K12; SOURCE 9 EXPRESSION_SYSTEM_VARIANT: SHUFFLE; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 11 EXPRESSION_SYSTEM_VECTOR: PET32B+ KEYWDS VON WILLEBRAND FACTOR, FACTOR VIII, BLOOD CLOTTING EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR N.SHILTAGH,J.KIRKPATRICK,L.D.CABRITA,T.A.J.MCKINNON,K.THALASSINOS, AUTHOR 2 E.G.D.TUDDENHAM,D.F.HANSEN REVDAT 3 14-JUN-23 2MHP 1 REMARK REVDAT 2 24-AUG-22 2MHP 1 JRNL REMARK SEQADV REVDAT 1 14-MAY-14 2MHP 0 JRNL AUTH N.SHILTAGH,J.KIRKPATRICK,L.D.CABRITA,T.A.MCKINNON, JRNL AUTH 2 K.THALASSINOS,E.G.TUDDENHAM,D.F.HANSEN JRNL TITL SOLUTION STRUCTURE OF THE MAJOR FACTOR VIII BINDING REGION JRNL TITL 2 ON VON WILLEBRAND FACTOR. JRNL REF BLOOD V. 123 4143 2014 JRNL REFN ESSN 1528-0020 JRNL PMID 24700780 JRNL DOI 10.1182/BLOOD-2013-07-517086 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMRJ 2.2D, XPLOR-NIH REMARK 3 AUTHORS : VARIAN (VNMRJ), REMARK 3 C.D.SCHWIETERS,J.J.KUSZEWSKI,N.TJANDRA,G.M.CLORE REMARK 3 (XPLOR-NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: EACH STRUCTURE IN THE ENSEMBLE WAS REMARK 3 CALCULATED INDIVIDUALLY. REMARK 4 REMARK 4 2MHP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-DEC-13. REMARK 100 THE DEPOSITION ID IS D_1000103629. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.4 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 300 MM [U-13C; U-15N] VWF TIL'E' REMARK 210 -1, 20 MM SODIUM PHOSPHATE-2, REMARK 210 100 MM SODIUM CHLORIDE-3, 90% REMARK 210 H2O/10% D2O; 300 MM [U-10% 13C] REMARK 210 VWF TIL'E'-4, 20 MM SODIUM REMARK 210 PHOSPHATE-5, 100 MM SODIUM REMARK 210 CHLORIDE-6, 90% H2O/10% D2O; 300 REMARK 210 MM [U-15N] VWF TIL'E'-7, 20 MM REMARK 210 SODIUM PHOSPHATE-8, 100 MM REMARK 210 SODIUM CHLORIDE-9, 90% H2O/10% REMARK 210 D2O; 300 MM [U-13C; U-15N] VWF REMARK 210 TIL'E'-10, 20 MM SODIUM REMARK 210 PHOSPHATE-11, 100 MM SODIUM REMARK 210 CHLORIDE-12, 90% H2O/10% D2O; REMARK 210 300 MM [U-15N] VWF TIL'E'-13, 20 REMARK 210 MM SODIUM PHOSPHATE-14, 100 MM REMARK 210 SODIUM CHLORIDE-15, 90% H2O/10% REMARK 210 D2O; 300 MM [U-13C; U-15N] VWF REMARK 210 TIL'E'-16, 20 MM SODIUM REMARK 210 PHOSPHATE-17, 100 MM SODIUM REMARK 210 CHLORIDE-18, 90% H2O/10% D2O; REMARK 210 300 MM [U-13C; U-15N] VWF TIL'E'- REMARK 210 19, 20 MM SODIUM PHOSPHATE-20, REMARK 210 100 MM SODIUM CHLORIDE-21, 5 MG/ REMARK 210 ML PF1 PHAGE-22, 90% H2O/10% D2O; REMARK 210 300 MM [U-13C; U-15N] VWF TIL'E' REMARK 210 -23, 20 MM SODIUM PHOSPHATE-24, REMARK 210 100 MM SODIUM CHLORIDE-25, 2 % W/ REMARK 210 V PENTAETHYLENE GLYCOL DODECYL REMARK 210 ETHER-26, 50 MM N-HEXANOL-27, 90% REMARK 210 H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCO; 3D HNCA; 3D HN(CO)CA; REMARK 210 3D HNCACB; 3D 15N HSQC-NOESY-15N REMARK 210 HSQC; 3D HN(CACO)NH; 3D (H)CC(CO) REMARK 210 NH; 3D H(CCCO)NH; 3D HCCH-TOCSY; REMARK 210 2D CONSTANT-TIME 1H-13C HSQC; 3D REMARK 210 1H-15N NOESY; 3D 1H-13C NOESY; { REMARK 210 1H}15N STEADY-STATE NOE; 15N REMARK 210 R1RHO RELAXATION; 15N R1 REMARK 210 RELAXATION; 15N R2-CPMG REMARK 210 RELAXATION DISPERSION; 2D IPAP- REMARK 210 15N HSQC; 2D IPAP-E.COSY-15N REMARK 210 HSQC; 3D IPAP-HNCO(J-CA); 3D REMARK 210 HN(CO)CA(J-CB); 3D IPAP-(HA) REMARK 210 CA(CO)NH; 2D 1H-15N HSQC; 2D 1H- REMARK 210 13C HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 500 MHZ; 700 MHZ REMARK 210 SPECTROMETER MODEL : INOVA; AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : VARIAN; BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN 2.1, NMRPIPE, SPARKY, REMARK 210 XPLOR-NIH REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O CYS A 68 H TYR A 75 1.48 REMARK 500 H ARG A 91 O LYS A 94 1.57 REMARK 500 O THR A 30 H TYR A 34 1.59 REMARK 500 H ILE A 83 O ASN A 86 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 5 8.01 53.12 REMARK 500 1 ARG A 7 178.05 49.42 REMARK 500 1 PRO A 8 105.43 -44.89 REMARK 500 1 PRO A 16 -179.30 -46.00 REMARK 500 1 GLU A 23 11.80 51.17 REMARK 500 1 CYS A 27 -48.56 -152.16 REMARK 500 1 CYS A 31 -17.05 -46.46 REMARK 500 1 GLU A 37 152.94 -48.70 REMARK 500 1 SER A 45 92.57 20.32 REMARK 500 1 PRO A 50 165.69 -38.47 REMARK 500 1 GLN A 71 36.10 87.81 REMARK 500 1 ARG A 93 12.24 54.23 REMARK 500 1 CYS A 102 69.46 -66.82 REMARK 500 2 CYS A 6 81.96 -60.24 REMARK 500 2 MET A 10 -58.79 -122.32 REMARK 500 2 PRO A 16 179.24 -46.32 REMARK 500 2 ARG A 21 52.29 -149.77 REMARK 500 2 CYS A 27 -124.90 -154.61 REMARK 500 2 CYS A 31 -4.89 -52.12 REMARK 500 2 MET A 39 -178.88 -66.06 REMARK 500 2 SER A 40 88.83 -47.31 REMARK 500 2 CYS A 43 100.31 52.99 REMARK 500 2 GLU A 57 26.64 45.72 REMARK 500 2 ASN A 58 10.27 88.56 REMARK 500 2 ARG A 93 12.22 54.47 REMARK 500 2 HIS A 100 171.27 -59.60 REMARK 500 2 CYS A 102 70.77 -63.09 REMARK 500 3 SER A 5 -173.82 -56.26 REMARK 500 3 CYS A 6 96.85 56.72 REMARK 500 3 MET A 10 -59.45 -128.96 REMARK 500 3 PRO A 16 177.79 -46.31 REMARK 500 3 ARG A 21 55.52 -142.26 REMARK 500 3 CYS A 27 -76.13 -40.32 REMARK 500 3 CYS A 31 -4.68 -50.42 REMARK 500 3 SER A 40 61.63 -68.30 REMARK 500 3 CYS A 43 96.30 65.47 REMARK 500 3 PRO A 50 158.58 -34.20 REMARK 500 3 CYS A 85 -29.36 63.35 REMARK 500 3 ARG A 93 11.93 55.99 REMARK 500 4 MET A 3 21.41 46.18 REMARK 500 4 ARG A 7 162.30 -38.83 REMARK 500 4 PRO A 8 104.94 -31.51 REMARK 500 4 PRO A 16 178.76 -47.27 REMARK 500 4 ASN A 19 61.63 65.42 REMARK 500 4 ARG A 21 56.07 -150.38 REMARK 500 4 GLU A 23 29.47 38.40 REMARK 500 4 GLU A 26 -78.68 57.16 REMARK 500 4 CYS A 27 -144.69 -78.43 REMARK 500 4 THR A 28 -157.16 -86.69 REMARK 500 4 CYS A 31 1.37 -59.15 REMARK 500 REMARK 500 THIS ENTRY HAS 138 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 19646 RELATED DB: BMRB REMARK 900 RELATED ID: 2MHQ RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 Q91R (UNP RESIDUE 852) IS NATURAL VARIANT ACCORDING TO DATABASE REMARK 999 P04275 (VWF_HUMAN), UNIPROTKB/SWISS-PROT. DBREF 2MHP A 5 103 UNP P04275 VWF_HUMAN 766 864 SEQADV 2MHP GLY A 1 UNP P04275 EXPRESSION TAG SEQADV 2MHP ALA A 2 UNP P04275 EXPRESSION TAG SEQADV 2MHP MET A 3 UNP P04275 EXPRESSION TAG SEQADV 2MHP GLY A 4 UNP P04275 EXPRESSION TAG SEQADV 2MHP ARG A 91 UNP P04275 GLN 852 SEE REMARK 999 SEQRES 1 A 103 GLY ALA MET GLY SER CYS ARG PRO PRO MET VAL LYS LEU SEQRES 2 A 103 VAL CYS PRO ALA ASP ASN LEU ARG ALA GLU GLY LEU GLU SEQRES 3 A 103 CYS THR LYS THR CYS GLN ASN TYR ASP LEU GLU CYS MET SEQRES 4 A 103 SER MET GLY CYS VAL SER GLY CYS LEU CYS PRO PRO GLY SEQRES 5 A 103 MET VAL ARG HIS GLU ASN ARG CYS VAL ALA LEU GLU ARG SEQRES 6 A 103 CYS PRO CYS PHE HIS GLN GLY LYS GLU TYR ALA PRO GLY SEQRES 7 A 103 GLU THR VAL LYS ILE GLY CYS ASN THR CYS VAL CYS ARG SEQRES 8 A 103 ASP ARG LYS TRP ASN CYS THR ASP HIS VAL CYS ASP HELIX 1 1 GLU A 64 CYS A 66 5 3 SHEET 1 A 2 VAL A 11 LEU A 13 0 SHEET 2 A 2 GLY A 46 LEU A 48 -1 O GLY A 46 N LEU A 13 SHEET 1 B 2 MET A 53 HIS A 56 0 SHEET 2 B 2 ARG A 59 ALA A 62 -1 O ARG A 59 N HIS A 56 SHEET 1 C 2 CYS A 68 PHE A 69 0 SHEET 2 C 2 GLU A 74 TYR A 75 -1 O TYR A 75 N CYS A 68 SHEET 1 D 3 THR A 80 ILE A 83 0 SHEET 2 D 3 ASN A 86 ARG A 91 -1 O ASN A 86 N ILE A 83 SHEET 3 D 3 LYS A 94 CYS A 97 -1 O LYS A 94 N ARG A 91 SSBOND 1 CYS A 6 CYS A 47 1555 1555 2.02 SSBOND 2 CYS A 15 CYS A 43 1555 1555 2.02 SSBOND 3 CYS A 27 CYS A 38 1555 1555 2.02 SSBOND 4 CYS A 31 CYS A 66 1555 1555 2.01 SSBOND 5 CYS A 49 CYS A 60 1555 1555 2.02 SSBOND 6 CYS A 68 CYS A 90 1555 1555 2.00 SSBOND 7 CYS A 85 CYS A 102 1555 1555 2.02 SSBOND 8 CYS A 88 CYS A 97 1555 1555 2.02 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1