HEADER SIGNALING PROTEIN 05-DEC-13 2MHY TITLE STRUCTURE DETERMINATION OF THE SALAMANDER COURTSHIP PHEROMONE TITLE 2 PLETHODONTID MODULATING FACTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLETHODONTID MODULATING FACTOR; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 20-76; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLETHODON SHERMANI; SOURCE 3 ORGANISM_COMMON: SHERMAN SALAMANDER; SOURCE 4 ORGANISM_TAXID: 263671; SOURCE 5 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: 4922; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: KM71H; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PPICZALPHAA KEYWDS PHEROMONE, SALAMANDER, PMF, THREE-FINGER PROTEIN, TFP, SIGNALING KEYWDS 2 PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR D.B.WILBURN,K.E.BOWEN,K.A.DOTY,S.ARUMUGAM,A.N.LANE,P.W.FELDHOFF, AUTHOR 2 R.C.FELDHOFF REVDAT 3 14-JUN-23 2MHY 1 REMARK REVDAT 2 09-JUL-14 2MHY 1 JRNL REVDAT 1 01-JAN-14 2MHY 0 JRNL AUTH D.B.WILBURN,K.E.BOWEN,K.A.DOTY,S.ARUMUGAM,A.N.LANE, JRNL AUTH 2 P.W.FELDHOFF,R.C.FELDHOFF JRNL TITL STRUCTURAL INSIGHTS INTO THE EVOLUTION OF A SEXY PROTEIN: JRNL TITL 2 NOVEL TOPOLOGY AND RESTRICTED BACKBONE FLEXIBILITY IN A JRNL TITL 3 HYPERVARIABLE PHEROMONE FROM THE RED-LEGGED SALAMANDER, JRNL TITL 4 PLETHODON SHERMANI. JRNL REF PLOS ONE V. 9 96975 2014 JRNL REFN ESSN 1932-6203 JRNL PMID 24849290 JRNL DOI 10.1371/JOURNAL.PONE.0096975 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1, CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MHY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-DEC-13. REMARK 100 THE DEPOSITION ID IS D_1000103635. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 20 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 0.1 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 2.2 MM [U-98% 15N] RPMF-G, 90% REMARK 210 H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-1H NOESY; REMARK 210 3D HNCO; 3D 1H-15N NOESY; 3D 1H- REMARK 210 15N TOCSY; 2D 1H-13C HSQC; 2D 1H- REMARK 210 1H TOCSY; 2D 1H-1H COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, TALOS, SPARKY REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS A 34 SG CYS A 40 1.37 REMARK 500 SG CYS A 51 SG CYS A 56 1.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ILE A 17 -68.10 -143.38 REMARK 500 1 CYS A 34 -169.15 179.30 REMARK 500 1 ALA A 43 87.20 -68.10 REMARK 500 2 PRO A 15 85.89 -69.73 REMARK 500 2 CYS A 34 -168.66 179.21 REMARK 500 2 ALA A 43 101.62 -53.54 REMARK 500 3 PRO A 15 87.77 -69.72 REMARK 500 3 CYS A 34 -168.47 179.10 REMARK 500 4 PRO A 15 78.40 -69.78 REMARK 500 4 CYS A 34 -168.98 179.09 REMARK 500 4 ALA A 43 85.54 -69.31 REMARK 500 5 PRO A 15 78.29 -69.76 REMARK 500 5 CYS A 34 -168.52 179.24 REMARK 500 5 ALA A 43 86.77 -68.15 REMARK 500 6 CYS A 34 -168.45 179.44 REMARK 500 6 ALA A 43 88.49 -67.07 REMARK 500 7 CYS A 34 -168.97 179.34 REMARK 500 8 ILE A 17 -69.36 -143.00 REMARK 500 8 CYS A 34 -168.69 179.39 REMARK 500 9 PRO A 15 79.60 -69.80 REMARK 500 9 CYS A 34 -169.44 179.28 REMARK 500 9 ALA A 43 85.41 -69.01 REMARK 500 10 ILE A 17 -56.12 -144.81 REMARK 500 10 CYS A 34 -169.13 179.46 REMARK 500 10 ALA A 43 87.32 -67.87 REMARK 500 11 PRO A 15 78.17 -69.75 REMARK 500 11 CYS A 34 -168.71 179.27 REMARK 500 11 ALA A 43 84.68 -69.60 REMARK 500 12 ILE A 17 -69.03 -143.62 REMARK 500 12 CYS A 34 -168.87 179.54 REMARK 500 12 LEU A 55 60.96 60.33 REMARK 500 13 CYS A 34 -168.33 179.41 REMARK 500 13 ALA A 43 92.68 -63.65 REMARK 500 14 PRO A 15 78.04 -69.75 REMARK 500 14 CYS A 34 -168.71 179.28 REMARK 500 14 ALA A 43 84.15 -69.90 REMARK 500 15 PRO A 15 78.11 -69.77 REMARK 500 15 CYS A 34 -169.23 179.68 REMARK 500 16 CYS A 34 -168.43 179.34 REMARK 500 17 CYS A 34 -169.49 179.71 REMARK 500 17 ALA A 43 86.87 -68.08 REMARK 500 18 PRO A 15 77.60 -69.69 REMARK 500 18 CYS A 34 -169.45 179.51 REMARK 500 18 LEU A 55 61.02 60.27 REMARK 500 19 ILE A 17 -66.18 -122.39 REMARK 500 19 CYS A 34 -169.17 179.43 REMARK 500 20 TYR A 18 109.01 64.97 REMARK 500 20 CYS A 34 -170.16 179.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 19660 RELATED DB: BMRB DBREF 2MHY A 1 57 UNP Q0GB44 Q0GB44_9SALA 20 76 SEQRES 1 A 57 LEU GLN CYS ASN THR LEU ASP GLY GLY THR GLU GLU CYS SEQRES 2 A 57 ILE PRO GLY ILE TYR ASN VAL CYS VAL HIS TYR LYS SER SEQRES 3 A 57 GLU ASP GLU GLU TYR LYS SER CYS GLY ILE GLN GLU GLU SEQRES 4 A 57 CYS GLU ASP ALA GLU GLY ALA THR VAL LEU CYS CYS PRO SEQRES 5 A 57 GLU ASP LEU CYS ASN HELIX 1 1 ILE A 36 GLU A 41 1 6 SHEET 1 A 2 GLN A 2 ASN A 4 0 SHEET 2 A 2 THR A 10 GLU A 12 -1 O GLU A 11 N CYS A 3 SHEET 1 B 2 HIS A 23 LYS A 25 0 SHEET 2 B 2 GLU A 30 LYS A 32 -1 O TYR A 31 N TYR A 24 SSBOND 1 CYS A 3 CYS A 13 1555 1555 2.11 SSBOND 2 CYS A 21 CYS A 50 1555 1555 1.85 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1