HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 16-DEC-13 2MIO TITLE SOLUTION NMR STRUCTURE OF SH3 DOMAIN 1 OF RHO GTPASE-ACTIVATING TITLE 2 PROTEIN 10 FROM HOMO SAPIENS, NORTHEAST STRUCTURAL GENOMICS TITLE 3 CONSORTIUM (NESG) TARGET HR9129A COMPND MOL_ID: 1; COMPND 2 MOLECULE: RHO GTPASE-ACTIVATING PROTEIN 10; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SH3 DOMAIN 1 RESIDUES 728-786; COMPND 5 SYNONYM: GTPASE REGULATOR ASSOCIATED WITH FOCAL ADHESION KINASE 2, COMPND 6 GRAF-RELATED PROTEIN 2, RHO-TYPE GTPASE-ACTIVATING PROTEIN 10; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ARHGAP10, GRAF2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PMGK; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET15_NESG KEYWDS STRUCTURAL GENOMICS, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, NESG, KEYWDS 2 PSI-BIOLOGY, PROTEIN STRUCTURE INITIATIVE, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR X.XU,A.ELETSKY,S.V.S.R.K.PULAVARTI,H.WANG,H.JANJUA,R.XIAO, AUTHOR 2 J.K.EVERETT,D.K.SUKUMARAN,G.T.MONTELIONE,T.SZYPERSKI,NORTHEAST AUTHOR 3 STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 2 14-JUN-23 2MIO 1 REMARK SEQADV REVDAT 1 01-JAN-14 2MIO 0 JRNL AUTH X.XU,A.ELETSKY,S.V.S.R.K.PULAVARTI,H.WANG,P.T.O'CONNELL, JRNL AUTH 2 H.JANJUA,R.XIAO,J.K.EVERETT,D.SUKUMARAN,G.T.MONTELIONE, JRNL AUTH 3 T.SZYPERSKI JRNL TITL SOLUTION NMR STRUCTURE OF SH3 DOMAIN 1 OF RHO JRNL TITL 2 GTPASE-ACTIVATING PROTEIN 10 FROM HOMO SAPIENS, NORTHEAST JRNL TITL 3 STRUCTURAL GENOMICS CONSORTIUM (NESG) TARGET HR9129A JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS, CYANA 3.0, AUTOSTRUCTURE 2.1 REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 (CNS), GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 HUANG, TEJERO, POWERS AND MONTELIONE REMARK 3 (AUTOSTRUCTURE) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: STRUCTURE DETERMINATION WAS PERFORMED REMARK 3 BY RUNNING CYANA AND ASDP IN PARALLEL USING NOE-BASED REMARK 3 CONSTRAINTS AND PHI AND PSI DIHEDRAL ANGLE CONSTRAINTS FROM REMARK 3 TALOSN. CONSENSUS PEAK ASSIGNMENTS WERE SELECTED AND USED IN REMARK 3 ITERATIVE REFINEMENT WITH CYANA. THE 20 CONFORMERS OUT OF 100 REMARK 3 WITH THE LOWEST TARGET FUNCTION WERE FURTHER REFINED BY REMARK 3 SIMULATED ANNEALING IN EXPLICIT WATER BATH USING THE PROGRAM CNS REMARK 3 WITH PARAM19 FORCE FIELD NMR. REMARK 4 REMARK 4 2MIO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-DEC-13. REMARK 100 THE DEPOSITION ID IS D_1000103659. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.72 MM U-100% 13C-U-100%15N REMARK 210 LABELED PROTEIN, 90% H2O/10% D2O; REMARK 210 0.72 MM 10% 13C U-100% 15N REMARK 210 LABELED PROTEIN, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C CT REMARK 210 HSQC ALIPHATIC; 3D HNCO; 3D REMARK 210 CBCA(CO)NH; 3D HNCACB; 2D 1H-13C REMARK 210 CT HSQC AROMATIC; 3D SIMUTANEOUS REMARK 210 13C-AROMATIC,13C-ALIPHATIC,15N REMARK 210 EDITED 1H-1H NOESY; 2D 1H-13C REMARK 210 HSQC ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 3D HBHA(CO)NH; 3D(H) REMARK 210 CCH-TOCSY ALI; 3D (H)CCH-COSY REMARK 210 ALI; GFT-43D (H)CCH-COSY REMARK 210 AROMATIC; 3D HN(CA)CO; GNFHSQC_ REMARK 210 HIS; 2D 1H-13C CT-HSQC REMARK 210 METHYL(28MS); 2D 1H-13C CT HSQC- REMARK 210 METHYL (42MS); 2D 1H-13C CT HSQC- REMARK 210 METHYL (56MS); 2D J-MODULATION REMARK 210 1H-15N HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CNS, CYANA 3.0, AUTOSTRUCTURE REMARK 210 2.1, AUTOASSIGN 2.1, XEASY, REMARK 210 VNMRJ, TALOSN, PSVS, CSI, MOLMOL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ARG A 13 161.48 70.28 REMARK 500 2 HIS A 5 134.31 80.32 REMARK 500 2 HIS A 7 166.52 68.47 REMARK 500 2 SER A 14 82.12 59.73 REMARK 500 3 HIS A 3 148.95 71.34 REMARK 500 3 HIS A 4 101.85 -57.68 REMARK 500 3 HIS A 8 87.83 -55.70 REMARK 500 3 MET A 11 -90.60 66.86 REMARK 500 3 HIS A 27 -72.92 -119.95 REMARK 500 3 SER A 28 -59.43 -162.09 REMARK 500 4 SER A 45 -153.16 -92.01 REMARK 500 4 ASN A 56 -63.25 68.09 REMARK 500 5 HIS A 6 74.12 -109.76 REMARK 500 5 HIS A 10 42.69 -147.76 REMARK 500 5 ARG A 13 177.90 65.14 REMARK 500 5 ALA A 37 109.85 -57.31 REMARK 500 6 HIS A 6 -32.46 174.41 REMARK 500 6 HIS A 27 -80.77 -132.05 REMARK 500 6 SER A 28 -60.90 -152.59 REMARK 500 6 ASN A 56 -67.24 75.09 REMARK 500 7 HIS A 3 109.61 67.62 REMARK 500 7 HIS A 10 32.33 -88.78 REMARK 500 8 HIS A 3 94.90 64.36 REMARK 500 8 HIS A 10 47.53 -83.90 REMARK 500 8 ASN A 56 -69.59 68.83 REMARK 500 9 HIS A 6 -73.45 74.59 REMARK 500 9 SER A 9 -168.06 -167.48 REMARK 500 9 SER A 14 81.03 62.81 REMARK 500 10 HIS A 4 -49.42 171.40 REMARK 500 10 HIS A 5 -89.65 57.20 REMARK 500 10 HIS A 6 -80.08 58.32 REMARK 500 10 HIS A 8 -60.82 74.86 REMARK 500 10 SER A 14 90.66 57.95 REMARK 500 10 HIS A 27 -153.37 -179.06 REMARK 500 11 HIS A 5 82.87 -57.39 REMARK 500 11 MET A 11 36.17 -84.54 REMARK 500 11 SER A 14 85.40 66.46 REMARK 500 11 ASN A 56 18.50 58.94 REMARK 500 12 HIS A 7 116.77 69.20 REMARK 500 12 HIS A 10 91.77 -66.16 REMARK 500 12 PRO A 48 97.46 -65.89 REMARK 500 12 ASN A 56 -69.31 69.54 REMARK 500 13 HIS A 7 94.73 -64.91 REMARK 500 13 MET A 11 -5.40 -152.43 REMARK 500 14 HIS A 3 95.14 -62.00 REMARK 500 14 HIS A 6 100.76 -167.34 REMARK 500 14 SER A 9 -171.24 63.84 REMARK 500 14 ILE A 12 91.95 -65.77 REMARK 500 14 SER A 14 31.35 175.01 REMARK 500 15 SER A 9 46.08 -90.46 REMARK 500 REMARK 500 THIS ENTRY HAS 86 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 19684 RELATED DB: BMRB REMARK 900 RELATED ID: NESG-HR9129A RELATED DB: TARGETTRACK DBREF 2MIO A 12 70 UNP A1A4S6 RHG10_HUMAN 728 786 SEQADV 2MIO MET A 1 UNP A1A4S6 EXPRESSION TAG SEQADV 2MIO GLY A 2 UNP A1A4S6 EXPRESSION TAG SEQADV 2MIO HIS A 3 UNP A1A4S6 EXPRESSION TAG SEQADV 2MIO HIS A 4 UNP A1A4S6 EXPRESSION TAG SEQADV 2MIO HIS A 5 UNP A1A4S6 EXPRESSION TAG SEQADV 2MIO HIS A 6 UNP A1A4S6 EXPRESSION TAG SEQADV 2MIO HIS A 7 UNP A1A4S6 EXPRESSION TAG SEQADV 2MIO HIS A 8 UNP A1A4S6 EXPRESSION TAG SEQADV 2MIO SER A 9 UNP A1A4S6 EXPRESSION TAG SEQADV 2MIO HIS A 10 UNP A1A4S6 EXPRESSION TAG SEQADV 2MIO MET A 11 UNP A1A4S6 EXPRESSION TAG SEQRES 1 A 70 MET GLY HIS HIS HIS HIS HIS HIS SER HIS MET ILE ARG SEQRES 2 A 70 SER ARG LYS ALA ARG ALA VAL TYR PRO CYS GLU ALA GLU SEQRES 3 A 70 HIS SER SER GLU LEU SER PHE GLU ILE GLY ALA ILE PHE SEQRES 4 A 70 GLU ASP VAL GLN THR SER ARG GLU PRO GLY TRP LEU GLU SEQRES 5 A 70 GLY THR LEU ASN GLY LYS ARG GLY LEU ILE PRO GLN ASN SEQRES 6 A 70 TYR VAL LYS LEU LEU SHEET 1 A 5 LYS A 58 PRO A 63 0 SHEET 2 A 5 TRP A 50 LEU A 55 -1 N LEU A 51 O ILE A 62 SHEET 3 A 5 ILE A 38 THR A 44 -1 N GLU A 40 O THR A 54 SHEET 4 A 5 LYS A 16 ALA A 19 -1 N ALA A 17 O PHE A 39 SHEET 5 A 5 VAL A 67 LEU A 69 -1 O LYS A 68 N ARG A 18 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1