data_2MJ4 # _entry.id 2MJ4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2MJ4 RCSB RCSB103674 BMRB 19704 WWPDB D_1000103674 # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 1NOR PDB 'Old structure at pH=3.0' unspecified 5052 BMRB 'Old 1H chemical shifts at pH=3.0' unspecified 5690 BMRB 'Current data is the refinement of the old one' unspecified 19704 BMRB . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2MJ4 _pdbx_database_status.methods_development_category ? _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2013-12-26 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lesovoy, D.M.' 1 'Nolde, S.B.' 2 'Bocharov, E.V.' 3 'Lyukmanova, E.N.' 4 'Arseniev, A.S.' 5 # _citation.id primary _citation.title 'An NMR-based approach for validation of protein side-chains dynamics in silico' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Lesovoy, D.M.' 1 primary 'Nolde, S.B.' 2 primary 'Bocharov, E.V.' 3 primary 'Lyukmanova, E.N.' 4 primary 'Arseniev, A.S.' 5 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Short neurotoxin 1' _entity.formula_weight 6895.784 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Neurotoxin II, NTX II, Neurotoxin alpha' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code LECHNQQSSQPPTTKTCSGETNCYKKWWSDHRGTIIERGCGCPKVKPGVNLNCCRTDRCNN _entity_poly.pdbx_seq_one_letter_code_can LECHNQQSSQPPTTKTCSGETNCYKKWWSDHRGTIIERGCGCPKVKPGVNLNCCRTDRCNN _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 GLU n 1 3 CYS n 1 4 HIS n 1 5 ASN n 1 6 GLN n 1 7 GLN n 1 8 SER n 1 9 SER n 1 10 GLN n 1 11 PRO n 1 12 PRO n 1 13 THR n 1 14 THR n 1 15 LYS n 1 16 THR n 1 17 CYS n 1 18 SER n 1 19 GLY n 1 20 GLU n 1 21 THR n 1 22 ASN n 1 23 CYS n 1 24 TYR n 1 25 LYS n 1 26 LYS n 1 27 TRP n 1 28 TRP n 1 29 SER n 1 30 ASP n 1 31 HIS n 1 32 ARG n 1 33 GLY n 1 34 THR n 1 35 ILE n 1 36 ILE n 1 37 GLU n 1 38 ARG n 1 39 GLY n 1 40 CYS n 1 41 GLY n 1 42 CYS n 1 43 PRO n 1 44 LYS n 1 45 VAL n 1 46 LYS n 1 47 PRO n 1 48 GLY n 1 49 VAL n 1 50 ASN n 1 51 LEU n 1 52 ASN n 1 53 CYS n 1 54 CYS n 1 55 ARG n 1 56 THR n 1 57 ASP n 1 58 ARG n 1 59 CYS n 1 60 ASN n 1 61 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Oxus cobra' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Naja oxiana' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 8657 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type vector _entity_src_gen.pdbx_host_org_vector NTII _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NXS1_NAJOX _struct_ref.pdbx_db_accession P01427 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code LECHNQQSSQPPTTKTCSGETNCYKKWWSDHRGTIIERGCGCPKVKPGVNLNCCRTDRCNN _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2MJ4 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 61 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P01427 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 61 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 61 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 2 '2D 1H-15N HSQC' 1 2 1 '2D 1H-13C HSQC aliphatic' 1 3 1 '2D 1H-13C HSQC aromatic' 1 4 1 '2D 13C-15N HSQC carbon' 1 5 1 '2D 13C->13C carbon' 1 6 1 '2D 1H->(13C)->13C carbon' 1 7 1 '3D HNCO' 1 8 1 '3D HNCA' 1 9 1 '3D HN(CO)CA' 1 10 1 '3D HN(CA)CO' 1 11 1 '3D HCCH-TOCSY' 1 12 2 '3D HNHA' 1 13 2 '3D HNHB' 1 14 4 '2D DQF-COSY' 1 15 2 '3D 1H-15N NOESY' 1 16 1 '3D 1H-13C NOESY aliphatic' 1 17 1 '3D 1H-13C NOESY aromatic' 1 18 2 '2D 1H-15N CLEANEX' 1 19 1 '3D HNCO' 1 20 2 '2D 1H-15N HSQC H/D' 1 21 2 '2D 1H-15N 15N R1' 1 22 2 '2D 1H-15N NH-NH/15N R1' 1 23 2 '2D 1H-15N 15N R2' 1 24 2 '2D 1H-15N 15N-1H NOE' 1 25 1 '2D 1H-13C 13C R1' 1 26 1 '2D 1H-13C 13C-1H NOE' 1 27 1 '2D 1H-13C CH-CH/13C R1' 1 28 1 '2D 1H-13C CH-CH/13C R2' 1 29 3 '2D 1H-15N 15N R1' 1 30 3 '2D 1H-15N 15N R2' 1 31 3 '2D 1H-15N 15N-1H NOE' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 50 _pdbx_nmr_exptl_sample_conditions.pH 5.0 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 303 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '1 mM [U-99% 13C; U-99% 15N] Neurotoxin II-1, 0.3 mM sodium azide-2, 10 mM citric acid-3, 20 mM Na2HPO4-4, 95% H2O/5% D2O' 1 '95% H2O/5% D2O' '1 mM [U-99% 15N] Neurotoxin II-5, 0.3 mM sodium azide-6, 10 mM citric acid-7, 20 mM Na2HPO4-8, 100% D2O' 2 '100% D2O' '1 mM [U-99% 15N] Neurotoxin II-9, 0.3 mM sodium azide-10, 10 mM citric acid-11, 20 mM Na2HPO4-12, 50% H2O/50% D2O' 3 '50% H2O/50% D2O' '2 mM Neurotoxin II-13, 0.3 mM sodium azide-14, 100% D2O' 4 '100% D2O' # _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model Avance _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2MJ4 _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ;The 1H-1H NOE amplitudes should be treated only according to the flexibility of the corresponding backbone or side chain groups: derived from the heteronuclear NOE, R1, R2, 1chch(dipolar cross-correlation contribution to R1), 2chch(dipolar cross-correlation contribution to R2), and 3J scalar coupling constant values. ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2MJ4 _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.representative_conformer 1 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2MJ4 _pdbx_nmr_representative.selection_criteria 'fewest violations' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.ordinal _pdbx_nmr_software.version 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA 1 3.0 'Rochus Keller' 'chemical shift assignment' CARA 2 1.8.4 'Wolfram Research' 'data analysis' Mathematica 3 ? 'Delaglio, Zhengrong and Bax' processing 'NMRPipe(ACME)' 4 ? 'Delaglio, Zhengrong and Bax' 'data analysis' 'NMRPipe(ACME)' 5 ? ? refinement CYANA 6 ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ;Side chains dynamics from 13CH, 13CH2, 13CH3, 15NH, and 15NH2 NMR relaxation: R1, R2, NOE, dipole-dipole cross-correlation contribution to R1 and R2. Simulated NMR parameters from molecular dynamics trajectory. ; _exptl.entry_id 2MJ4 _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2MJ4 _struct.title 'Neurotoxin II from snake venom Naja Oxiana in solution' _struct.pdbx_descriptor 'Short neurotoxin 1' _struct.pdbx_model_details 'fewest violations, model1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2MJ4 _struct_keywords.pdbx_keywords TOXIN _struct_keywords.text '13C relaxation, side chain dynamics, molecular dynamics, molecular mechanics force fields, optimization, TOXIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 3 SG ? ? ? 1_555 A CYS 23 SG ? ? A CYS 3 A CYS 23 1_555 ? ? ? ? ? ? ? 2.103 ? disulf2 disulf ? ? A CYS 3 SG ? ? ? 1_555 A CYS 17 SG ? ? A CYS 3 A CYS 17 1_555 ? ? ? ? ? ? ? 2.456 ? disulf3 disulf ? ? A CYS 17 SG ? ? ? 1_555 A CYS 40 SG ? ? A CYS 17 A CYS 40 1_555 ? ? ? ? ? ? ? 2.114 ? disulf4 disulf ? ? A CYS 42 SG ? ? ? 1_555 A CYS 53 SG ? ? A CYS 42 A CYS 53 1_555 ? ? ? ? ? ? ? 2.099 ? disulf5 disulf ? ? A CYS 54 SG ? ? ? 1_555 A CYS 59 SG ? ? A CYS 54 A CYS 59 1_555 ? ? ? ? ? ? ? 1.984 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 2 ? CYS A 3 ? GLU A 2 CYS A 3 A 2 LYS A 15 ? THR A 16 ? LYS A 15 THR A 16 B 1 ILE A 35 ? CYS A 40 ? ILE A 35 CYS A 40 B 2 CYS A 23 ? TRP A 28 ? CYS A 23 TRP A 28 B 3 ASN A 50 ? CYS A 54 ? ASN A 50 CYS A 54 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N CYS A 3 ? N CYS A 3 O LYS A 15 ? O LYS A 15 B 1 2 O ILE A 35 ? O ILE A 35 N TRP A 28 ? N TRP A 28 B 2 3 N CYS A 23 ? N CYS A 23 O CYS A 54 ? O CYS A 54 # _atom_sites.entry_id 2MJ4 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 1 1 LEU LEU A . n A 1 2 GLU 2 2 2 GLU GLU A . n A 1 3 CYS 3 3 3 CYS CYS A . n A 1 4 HIS 4 4 4 HIS HIS A . n A 1 5 ASN 5 5 5 ASN ASN A . n A 1 6 GLN 6 6 6 GLN GLN A . n A 1 7 GLN 7 7 7 GLN GLN A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 SER 9 9 9 SER SER A . n A 1 10 GLN 10 10 10 GLN GLN A . n A 1 11 PRO 11 11 11 PRO PRO A . n A 1 12 PRO 12 12 12 PRO PRO A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 CYS 17 17 17 CYS CYS A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 THR 21 21 21 THR THR A . n A 1 22 ASN 22 22 22 ASN ASN A . n A 1 23 CYS 23 23 23 CYS CYS A . n A 1 24 TYR 24 24 24 TYR TYR A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 TRP 27 27 27 TRP TRP A . n A 1 28 TRP 28 28 28 TRP TRP A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 HIS 31 31 31 HIS HIS A . n A 1 32 ARG 32 32 32 ARG ARG A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 ILE 35 35 35 ILE ILE A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 ARG 38 38 38 ARG ARG A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 CYS 40 40 40 CYS CYS A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 CYS 42 42 42 CYS CYS A . n A 1 43 PRO 43 43 43 PRO PRO A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 ASN 50 50 50 ASN ASN A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 ASN 52 52 52 ASN ASN A . n A 1 53 CYS 53 53 53 CYS CYS A . n A 1 54 CYS 54 54 54 CYS CYS A . n A 1 55 ARG 55 55 55 ARG ARG A . n A 1 56 THR 56 56 56 THR THR A . n A 1 57 ASP 57 57 57 ASP ASP A . n A 1 58 ARG 58 58 58 ARG ARG A . n A 1 59 CYS 59 59 59 CYS CYS A . n A 1 60 ASN 60 60 60 ASN ASN A . n A 1 61 ASN 61 61 61 ASN ASN A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2015-01-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'Neurotoxin II-1' 1 ? mM '[U-99% 13C; U-99% 15N]' 1 'sodium azide-2' 0.3 ? mM ? 1 'citric acid-3' 10 ? mM ? 1 Na2HPO4-4 20 ? mM ? 1 'Neurotoxin II-5' 1 ? mM '[U-99% 15N]' 2 'sodium azide-6' 0.3 ? mM ? 2 'citric acid-7' 10 ? mM ? 2 Na2HPO4-8 20 ? mM ? 2 'Neurotoxin II-9' 1 ? mM '[U-99% 15N]' 3 'sodium azide-10' 0.3 ? mM ? 3 'citric acid-11' 10 ? mM ? 3 Na2HPO4-12 20 ? mM ? 3 'Neurotoxin II-13' 2 ? mM ? 4 'sodium azide-14' 0.3 ? mM ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 8 ? ? 35.49 -135.37 2 1 GLN A 10 ? ? -44.24 168.83 3 1 PRO A 43 ? ? -69.81 -179.49 4 1 ASN A 60 ? ? -95.10 46.79 5 2 SER A 8 ? ? 35.04 -132.40 6 2 GLN A 10 ? ? -44.70 168.86 7 2 THR A 21 ? ? -140.53 15.34 8 2 PRO A 43 ? ? -69.81 -179.14 9 2 ASN A 60 ? ? -95.18 47.26 10 3 SER A 8 ? ? 36.04 -133.41 11 3 GLN A 10 ? ? -44.47 168.71 12 3 PRO A 43 ? ? -69.79 -179.28 13 3 ASN A 60 ? ? -95.47 48.81 14 4 SER A 8 ? ? 34.81 -133.73 15 4 GLN A 10 ? ? -44.42 169.15 16 4 PRO A 43 ? ? -69.75 -179.44 17 4 ASN A 60 ? ? -95.49 49.11 18 5 SER A 8 ? ? 34.66 -133.06 19 5 GLN A 10 ? ? -44.44 169.14 20 5 ASN A 60 ? ? -95.44 48.70 21 6 SER A 8 ? ? 35.11 -135.21 22 6 GLN A 10 ? ? -44.28 169.13 23 6 PRO A 43 ? ? -69.78 -179.21 24 6 ASN A 60 ? ? -95.44 48.62 25 7 SER A 8 ? ? 34.97 -135.27 26 7 GLN A 10 ? ? -44.26 169.10 27 7 PRO A 43 ? ? -69.84 -179.09 28 7 ASN A 60 ? ? -95.55 49.48 29 8 SER A 8 ? ? 34.57 -133.71 30 8 GLN A 10 ? ? -44.15 169.23 31 8 ASN A 60 ? ? -95.41 48.65 32 9 SER A 8 ? ? 47.77 -135.18 33 9 GLN A 10 ? ? -58.98 170.14 34 9 PRO A 43 ? ? -69.82 -179.35 35 9 ASN A 60 ? ? -94.71 44.80 36 10 SER A 8 ? ? 54.54 -133.26 37 10 GLN A 10 ? ? -44.61 169.60 38 10 PRO A 43 ? ? -69.88 -179.48 39 10 ASN A 60 ? ? -95.45 48.55 40 11 SER A 8 ? ? 38.53 -136.62 41 11 PRO A 43 ? ? -69.82 -178.93 42 11 ASN A 60 ? ? -95.29 47.78 43 12 SER A 8 ? ? 36.62 -128.67 44 12 GLN A 10 ? ? -44.42 168.26 45 12 PRO A 43 ? ? -69.80 -179.52 46 12 ASN A 60 ? ? -94.31 42.97 47 13 SER A 8 ? ? 47.35 -135.48 48 13 ASN A 60 ? ? -94.37 43.23 49 14 SER A 8 ? ? 34.58 -135.19 50 14 GLN A 10 ? ? -44.26 169.20 51 14 THR A 21 ? ? -140.95 15.58 52 14 PRO A 43 ? ? -69.83 -179.19 53 14 ASN A 60 ? ? -95.26 47.96 54 15 SER A 8 ? ? 45.92 -134.94 55 15 PRO A 43 ? ? -69.82 -179.59 56 15 ASN A 60 ? ? -95.10 46.54 57 16 SER A 8 ? ? 44.79 -135.76 58 16 PRO A 43 ? ? -69.80 -179.56 59 16 ASN A 60 ? ? -94.00 41.85 60 17 SER A 8 ? ? 34.08 -131.50 61 17 GLN A 10 ? ? -44.33 169.31 62 17 PRO A 43 ? ? -69.82 -179.62 63 17 ASN A 60 ? ? -94.19 42.33 64 18 SER A 8 ? ? 35.34 -133.14 65 18 GLN A 10 ? ? -44.45 168.78 66 18 ASN A 60 ? ? -95.41 48.33 67 19 SER A 8 ? ? 34.74 -134.54 68 19 GLN A 10 ? ? -44.48 169.07 69 19 PRO A 43 ? ? -69.83 -179.69 70 19 ASN A 60 ? ? -95.60 49.49 71 20 SER A 8 ? ? 52.47 -129.69 72 20 GLN A 10 ? ? -46.21 169.12 73 20 PRO A 43 ? ? -69.80 -179.24 74 20 ASN A 60 ? ? -95.30 48.19 #