data_2MJY # _entry.id 2MJY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2MJY pdb_00002mjy 10.2210/pdb2mjy/pdb RCSB RCSB103703 ? ? BMRB 19746 ? ? WWPDB D_1000103703 ? ? # _pdbx_database_related.db_id 19746 _pdbx_database_related.db_name BMRB _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2MJY _pdbx_database_status.methods_development_category ? _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2014-01-21 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'He, Y.' 1 'Wu, F.' 2 'Tian, C.' 3 # _citation.id primary _citation.title 'One-pot hydrazide-based native chemical ligation for efficient chemical synthesis and structure determination of toxin Mambalgin-1' _citation.journal_abbrev 'Chem.Commun.(Camb.)' _citation.journal_volume 50 _citation.page_first 5837 _citation.page_last 5839 _citation.year 2014 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1359-7345 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24619065 _citation.pdbx_database_id_DOI 10.1039/c4cc00779d # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pan, M.' 1 ? primary 'He, Y.' 2 ? primary 'Wen, M.' 3 ? primary 'Wu, F.' 4 ? primary 'Sun, D.' 5 ? primary 'Li, S.' 6 ? primary 'Zhang, L.' 7 ? primary 'Li, Y.' 8 ? primary 'Tian, C.' 9 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description Mambalgin-1 _entity.formula_weight 6574.644 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Mamb-1, Pi-Dp1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code LKCYQHGKVVTCHRDMKFCYHNTGMPFRNLKLILQGCSSSCSETENNKCCSTDRCNK _entity_poly.pdbx_seq_one_letter_code_can LKCYQHGKVVTCHRDMKFCYHNTGMPFRNLKLILQGCSSSCSETENNKCCSTDRCNK _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 LYS n 1 3 CYS n 1 4 TYR n 1 5 GLN n 1 6 HIS n 1 7 GLY n 1 8 LYS n 1 9 VAL n 1 10 VAL n 1 11 THR n 1 12 CYS n 1 13 HIS n 1 14 ARG n 1 15 ASP n 1 16 MET n 1 17 LYS n 1 18 PHE n 1 19 CYS n 1 20 TYR n 1 21 HIS n 1 22 ASN n 1 23 THR n 1 24 GLY n 1 25 MET n 1 26 PRO n 1 27 PHE n 1 28 ARG n 1 29 ASN n 1 30 LEU n 1 31 LYS n 1 32 LEU n 1 33 ILE n 1 34 LEU n 1 35 GLN n 1 36 GLY n 1 37 CYS n 1 38 SER n 1 39 SER n 1 40 SER n 1 41 CYS n 1 42 SER n 1 43 GLU n 1 44 THR n 1 45 GLU n 1 46 ASN n 1 47 ASN n 1 48 LYS n 1 49 CYS n 1 50 CYS n 1 51 SER n 1 52 THR n 1 53 ASP n 1 54 ARG n 1 55 CYS n 1 56 ASN n 1 57 LYS n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Dendroaspis polylepis polylepis' _pdbx_entity_src_syn.organism_common_name 'Black mamba' _pdbx_entity_src_syn.ncbi_taxonomy_id 8620 _pdbx_entity_src_syn.details 'Chemically synthesized' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NXSM1_DENPO _struct_ref.pdbx_db_accession P0DKR6 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code LKCYQHGKVVTCHRDMKFCYHNTGMPFRNLKLILQGCSSSCSETENNKCCSTDRCNK _struct_ref.pdbx_align_begin 22 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2MJY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 57 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0DKR6 _struct_ref_seq.db_align_beg 22 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 78 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 57 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D DQF-COSY' 1 2 1 '2D 1H-1H TOCSY' 1 3 1 '2D 1H-1H NOESY' 2 4 1 '2D DQF-COSY' 2 5 1 '2D 1H-1H TOCSY' 2 6 1 '2D 1H-1H NOESY' 2 7 2 '2D 1H-1H TOCSY' 2 8 3 '2D 1H-1H TOCSY' # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.temperature_units 1 160.8 6.5 ambient atm 298 K 2 160.8 6.5 ambient atm 310 K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '50 mM sodium phosphate-1, 90% H2O/10% D2O' 1 '90% H2O/10% D2O' '50 mM sodium phosphate-2, 5 % [U-2H] ethanol-3, 90% H2O/10% D2O' 2 '90% H2O/10% D2O' '50 mM sodium phosphate-4, 5 % [U-2H] TFE-5, 90% H2O/10% D2O' 3 '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 700 Varian INOVA 1 'Varian INOVA' 500 Varian INOVA 2 'Varian INOVA' # _pdbx_nmr_refine.entry_id 2MJY _pdbx_nmr_refine.method 'distance geometry' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2MJY _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.representative_conformer 1 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2MJY _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.ordinal _pdbx_nmr_software.version Varian collection VnmrJ 1 ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe 2 ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 'data analysis' NMRDraw 3 ? Goddard 'chemical shift assignment' Sparky 4 ? Goddard 'data analysis' Sparky 5 ? 'Schwieters, Kuszewski, Tjandra and Clore' 'structure solution' 'X-PLOR NIH' 6 ? 'Koradi, Billeter and Wuthrich' 'geometry optimization' MOLMOL 7 ? 'Laskowski and MacArthur' 'data analysis' ProcheckNMR 8 ? ? refinement 'X-PLOR NIH' 9 ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2MJY _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2MJY _struct.title 'Solution structure of synthetic Mamba-1 peptide' _struct.pdbx_model_details 'lowest energy, model1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2MJY _struct_keywords.pdbx_keywords TOXIN _struct_keywords.text 'toxin, Manba' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 3 SG ? ? ? 1_555 A CYS 19 SG ? ? A CYS 3 A CYS 19 1_555 ? ? ? ? ? ? ? 2.021 ? ? disulf2 disulf ? ? A CYS 12 SG ? ? ? 1_555 A CYS 37 SG ? ? A CYS 12 A CYS 37 1_555 ? ? ? ? ? ? ? 2.020 ? ? disulf3 disulf ? ? A CYS 41 SG ? ? ? 1_555 A CYS 49 SG ? ? A CYS 41 A CYS 49 1_555 ? ? ? ? ? ? ? 2.020 ? ? disulf4 disulf ? ? A CYS 50 SG ? ? ? 1_555 A CYS 55 SG ? ? A CYS 50 A CYS 55 1_555 ? ? ? ? ? ? ? 2.023 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 CYS A 3 ? TYR A 4 ? CYS A 3 TYR A 4 A 2 VAL A 9 ? VAL A 10 ? VAL A 9 VAL A 10 B 1 PHE A 18 ? ASN A 22 ? PHE A 18 ASN A 22 B 2 LEU A 34 ? SER A 38 ? LEU A 34 SER A 38 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N CYS A 3 ? N CYS A 3 O VAL A 10 ? O VAL A 10 B 1 2 N ASN A 22 ? N ASN A 22 O LEU A 34 ? O LEU A 34 # _atom_sites.entry_id 2MJY _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 1 1 LEU LEU A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 CYS 3 3 3 CYS CYS A . n A 1 4 TYR 4 4 4 TYR TYR A . n A 1 5 GLN 5 5 5 GLN GLN A . n A 1 6 HIS 6 6 6 HIS HIS A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 CYS 12 12 12 CYS CYS A . n A 1 13 HIS 13 13 13 HIS HIS A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 ASP 15 15 15 ASP ASP A . n A 1 16 MET 16 16 16 MET MET A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 PHE 18 18 18 PHE PHE A . n A 1 19 CYS 19 19 19 CYS CYS A . n A 1 20 TYR 20 20 20 TYR TYR A . n A 1 21 HIS 21 21 21 HIS HIS A . n A 1 22 ASN 22 22 22 ASN ASN A . n A 1 23 THR 23 23 23 THR THR A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 MET 25 25 25 MET MET A . n A 1 26 PRO 26 26 26 PRO PRO A . n A 1 27 PHE 27 27 27 PHE PHE A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 ASN 29 29 29 ASN ASN A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 GLN 35 35 35 GLN GLN A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 CYS 37 37 37 CYS CYS A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 CYS 41 41 41 CYS CYS A . n A 1 42 SER 42 42 42 SER SER A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 ASN 46 46 46 ASN ASN A . n A 1 47 ASN 47 47 47 ASN ASN A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 CYS 49 49 49 CYS CYS A . n A 1 50 CYS 50 50 50 CYS CYS A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 THR 52 52 52 THR THR A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 CYS 55 55 55 CYS CYS A . n A 1 56 ASN 56 56 56 ASN ASN A . n A 1 57 LYS 57 57 57 LYS LYS A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-01-28 2 'Structure model' 1 1 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' database_2 2 2 'Structure model' pdbx_database_status 3 2 'Structure model' pdbx_nmr_software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 2 'Structure model' '_pdbx_nmr_software.name' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'sodium phosphate-1' 50 ? mM ? 1 'sodium phosphate-2' 50 ? mM ? 2 ethanol-3 5 ? % '[U-2H]' 2 'sodium phosphate-4' 50 ? mM ? 3 TFE-5 5 ? % '[U-2H]' 3 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A CYS 19 ? ? H A CYS 50 ? ? 1.55 2 2 H A TYR 4 ? ? HD22 A ASN 56 ? ? 1.18 3 2 H A THR 44 ? ? O A ASN 47 ? ? 1.55 4 3 H A THR 44 ? ? O A ASN 47 ? ? 1.56 5 3 O A CYS 19 ? ? H A CYS 50 ? ? 1.59 6 5 O A CYS 19 ? ? H A CYS 50 ? ? 1.57 7 5 H A PHE 27 ? ? OD1 A ASN 29 ? ? 1.59 8 6 O A CYS 19 ? ? H A CYS 50 ? ? 1.55 9 6 H A THR 44 ? ? O A ASN 47 ? ? 1.59 10 8 O A CYS 19 ? ? H A CYS 50 ? ? 1.53 11 9 O A CYS 19 ? ? H A CYS 50 ? ? 1.52 12 10 O A CYS 19 ? ? H A CYS 50 ? ? 1.57 13 11 H A THR 44 ? ? O A ASN 47 ? ? 1.59 14 13 O A CYS 19 ? ? H A CYS 50 ? ? 1.52 15 14 H A TYR 4 ? ? HD22 A ASN 56 ? ? 1.26 16 14 O A CYS 19 ? ? H A CYS 50 ? ? 1.52 17 15 O A CYS 19 ? ? H A CYS 50 ? ? 1.56 18 16 H A GLY 24 ? ? HD22 A ASN 46 ? ? 1.28 19 16 H A THR 44 ? ? O A ASN 47 ? ? 1.58 20 16 H A CYS 19 ? ? O A CYS 50 ? ? 1.60 21 17 HG A SER 38 ? ? H A SER 39 ? ? 1.22 22 17 O A CYS 19 ? ? H A CYS 50 ? ? 1.50 23 18 H A TYR 4 ? ? HD22 A ASN 56 ? ? 1.17 24 18 O A CYS 19 ? ? H A CYS 50 ? ? 1.53 25 19 H A THR 44 ? ? O A ASN 47 ? ? 1.58 26 20 H A GLY 24 ? ? OD1 A ASN 46 ? ? 1.59 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 3 ? ? -165.75 -167.07 2 1 VAL A 9 ? ? -43.20 95.37 3 1 CYS A 12 ? ? -58.00 -156.60 4 1 HIS A 13 ? ? -143.51 -145.08 5 1 ARG A 14 ? ? 41.13 21.89 6 1 HIS A 21 ? ? -114.14 74.76 7 1 MET A 25 ? ? 39.28 93.13 8 1 ASN A 29 ? ? 84.75 -2.07 9 1 LYS A 31 ? ? -88.93 45.67 10 1 LEU A 34 ? ? -115.36 67.35 11 1 SER A 51 ? ? -152.33 29.40 12 1 ARG A 54 ? ? 70.35 30.67 13 2 HIS A 13 ? ? -43.01 164.60 14 2 PRO A 26 ? ? -39.87 168.33 15 2 PHE A 27 ? ? -29.78 112.66 16 2 ASN A 29 ? ? -142.44 -96.81 17 2 LEU A 30 ? ? -92.13 -152.10 18 2 LYS A 31 ? ? -75.34 29.93 19 2 LEU A 32 ? ? 42.31 72.14 20 2 SER A 40 ? ? -143.59 56.98 21 2 GLU A 43 ? ? -34.28 121.63 22 2 ASP A 53 ? ? 52.13 156.19 23 2 ARG A 54 ? ? 34.08 25.45 24 3 CYS A 3 ? ? -162.34 -169.47 25 3 VAL A 9 ? ? -56.71 100.68 26 3 CYS A 12 ? ? -66.85 -158.67 27 3 HIS A 13 ? ? -134.94 -144.53 28 3 ARG A 14 ? ? 41.28 23.47 29 3 MET A 25 ? ? 27.29 61.66 30 3 PRO A 26 ? ? -69.79 -92.89 31 3 LEU A 30 ? ? 65.40 107.16 32 3 LYS A 31 ? ? -95.84 40.81 33 3 GLU A 43 ? ? -51.76 106.41 34 3 SER A 51 ? ? -145.53 42.54 35 3 ASP A 53 ? ? 54.60 154.42 36 3 ARG A 54 ? ? 30.79 30.89 37 4 VAL A 9 ? ? -57.28 92.17 38 4 CYS A 12 ? ? -61.41 -174.25 39 4 MET A 25 ? ? -152.80 75.93 40 4 PHE A 27 ? ? -88.83 39.14 41 4 ASN A 29 ? ? -161.59 78.17 42 4 LYS A 31 ? ? -108.86 77.56 43 4 ILE A 33 ? ? 27.55 99.48 44 4 LEU A 34 ? ? -100.19 52.99 45 4 SER A 40 ? ? 33.90 52.00 46 4 CYS A 41 ? ? -49.68 173.95 47 4 GLU A 43 ? ? -31.27 120.34 48 4 SER A 51 ? ? -140.95 31.34 49 4 ARG A 54 ? ? 33.40 39.14 50 5 HIS A 13 ? ? -51.32 174.85 51 5 SER A 39 ? ? -85.22 -72.74 52 6 TYR A 4 ? ? -68.32 86.66 53 6 HIS A 6 ? ? -114.77 50.49 54 6 VAL A 9 ? ? -50.57 93.90 55 6 HIS A 13 ? ? -51.09 -162.69 56 6 MET A 16 ? ? -49.47 104.76 57 6 THR A 23 ? ? -140.03 15.80 58 6 MET A 25 ? ? -149.27 59.01 59 6 PRO A 26 ? ? -56.91 -178.11 60 6 LEU A 30 ? ? -151.65 83.98 61 6 ILE A 33 ? ? -39.17 123.62 62 6 SER A 40 ? ? -107.86 58.82 63 6 GLU A 43 ? ? -36.03 131.11 64 6 SER A 51 ? ? -154.82 33.76 65 6 ASP A 53 ? ? 49.79 164.24 66 6 ARG A 54 ? ? 37.27 20.67 67 6 ASN A 56 ? ? -55.00 95.08 68 7 HIS A 13 ? ? -152.58 -159.01 69 7 ARG A 14 ? ? 60.84 -3.48 70 7 ASP A 15 ? ? 173.34 -51.54 71 7 MET A 25 ? ? -25.55 92.71 72 7 PRO A 26 ? ? -50.18 -168.30 73 7 ARG A 28 ? ? 48.31 111.37 74 7 ASN A 29 ? ? -167.71 -53.96 75 7 LEU A 30 ? ? -153.27 -11.01 76 7 LYS A 31 ? ? 72.78 59.76 77 7 LEU A 34 ? ? -116.07 77.38 78 7 GLU A 43 ? ? -38.36 128.09 79 7 THR A 52 ? ? -124.39 -153.45 80 7 ARG A 54 ? ? 37.04 30.02 81 8 VAL A 9 ? ? -40.88 91.53 82 8 THR A 11 ? ? -67.38 93.03 83 8 CYS A 12 ? ? -40.60 160.26 84 8 HIS A 13 ? ? -43.14 166.76 85 8 PHE A 27 ? ? -66.10 -128.30 86 8 ARG A 28 ? ? -48.81 87.18 87 8 LEU A 30 ? ? -149.00 -15.62 88 8 LEU A 32 ? ? -61.51 -153.90 89 8 ILE A 33 ? ? -33.56 140.29 90 8 SER A 38 ? ? -170.17 128.68 91 8 SER A 51 ? ? -149.53 24.29 92 8 ARG A 54 ? ? 90.40 20.84 93 9 CYS A 12 ? ? -64.61 -176.98 94 9 MET A 25 ? ? 38.77 65.81 95 9 PRO A 26 ? ? -68.59 3.52 96 9 PHE A 27 ? ? 42.42 98.98 97 9 ARG A 28 ? ? 50.45 -79.95 98 9 LEU A 30 ? ? 78.60 159.77 99 9 LYS A 31 ? ? -98.27 53.78 100 9 LEU A 34 ? ? -117.35 55.13 101 9 SER A 40 ? ? -104.43 45.58 102 9 THR A 44 ? ? -160.67 -162.96 103 9 SER A 51 ? ? -166.44 25.80 104 9 ASP A 53 ? ? 54.57 153.95 105 9 ARG A 54 ? ? 27.71 34.47 106 10 VAL A 9 ? ? -38.02 94.17 107 10 THR A 11 ? ? -93.42 54.17 108 10 HIS A 13 ? ? -163.44 -166.45 109 10 ARG A 14 ? ? 62.45 -13.15 110 10 ASP A 15 ? ? -166.58 -54.27 111 10 ASN A 29 ? ? -68.63 33.00 112 10 LEU A 34 ? ? -145.09 51.03 113 10 SER A 40 ? ? -117.74 72.31 114 10 THR A 44 ? ? -177.46 139.25 115 10 GLU A 45 ? ? -37.11 -23.50 116 10 SER A 51 ? ? -158.10 23.33 117 10 THR A 52 ? ? -129.27 -162.71 118 10 ARG A 54 ? ? 34.41 46.86 119 10 ASN A 56 ? ? -82.82 43.79 120 11 THR A 11 ? ? -103.18 66.17 121 11 HIS A 13 ? ? -155.62 -155.70 122 11 ARG A 14 ? ? 63.02 -5.27 123 11 ASP A 15 ? ? 164.98 -42.26 124 11 PHE A 27 ? ? 52.39 156.73 125 11 ASN A 29 ? ? -137.17 -90.38 126 11 LEU A 30 ? ? -143.51 -67.21 127 11 LEU A 32 ? ? -91.22 35.39 128 11 CYS A 41 ? ? -36.56 129.46 129 11 ASP A 53 ? ? 53.88 127.07 130 12 VAL A 9 ? ? -55.27 99.30 131 12 CYS A 12 ? ? -49.71 152.00 132 12 HIS A 13 ? ? -35.71 163.84 133 12 ASN A 29 ? ? -144.44 -21.72 134 12 LEU A 30 ? ? 68.36 -37.45 135 12 SER A 40 ? ? -109.89 52.16 136 12 CYS A 41 ? ? -37.28 170.18 137 12 SER A 42 ? ? -143.42 58.48 138 12 GLU A 43 ? ? -28.94 145.54 139 13 VAL A 9 ? ? -44.31 98.06 140 13 CYS A 12 ? ? -58.74 -166.17 141 13 HIS A 13 ? ? -53.04 174.91 142 13 LYS A 31 ? ? -151.41 56.03 143 13 CYS A 41 ? ? -30.64 125.43 144 13 GLU A 43 ? ? -32.44 140.96 145 13 THR A 52 ? ? -123.70 -169.52 146 13 ARG A 54 ? ? 35.20 25.60 147 13 ASN A 56 ? ? -30.89 -32.97 148 14 LYS A 2 ? ? -171.45 -177.37 149 14 VAL A 9 ? ? -51.85 95.76 150 14 CYS A 12 ? ? -42.91 170.98 151 14 MET A 25 ? ? -158.38 54.01 152 14 PRO A 26 ? ? -72.17 -83.14 153 14 PHE A 27 ? ? -60.94 -93.14 154 14 LEU A 30 ? ? 43.98 -168.70 155 14 SER A 40 ? ? -152.12 56.46 156 14 THR A 44 ? ? -151.25 -146.65 157 14 SER A 51 ? ? -156.45 26.67 158 15 CYS A 3 ? ? -166.63 -163.53 159 15 VAL A 9 ? ? -44.06 100.75 160 15 CYS A 12 ? ? -58.55 -163.31 161 15 HIS A 13 ? ? -132.15 -147.75 162 15 ARG A 14 ? ? 37.45 20.02 163 15 PRO A 26 ? ? -72.37 -157.70 164 15 ARG A 28 ? ? 54.17 146.49 165 15 ASN A 29 ? ? 71.87 161.31 166 15 LYS A 31 ? ? 54.50 80.23 167 15 SER A 40 ? ? -176.64 87.99 168 15 GLU A 43 ? ? -55.97 95.12 169 15 SER A 51 ? ? -150.02 31.38 170 15 ARG A 54 ? ? 72.17 30.04 171 16 CYS A 3 ? ? -168.54 -168.32 172 16 HIS A 6 ? ? -142.09 47.79 173 16 HIS A 13 ? ? -174.46 -147.31 174 16 ARG A 14 ? ? 61.55 -6.24 175 16 ASP A 15 ? ? 156.56 -36.56 176 16 MET A 25 ? ? -175.01 58.97 177 16 LYS A 31 ? ? 44.96 106.79 178 16 ILE A 33 ? ? 45.92 116.97 179 16 GLN A 35 ? ? -35.95 129.49 180 16 SER A 39 ? ? -80.74 -85.07 181 16 SER A 40 ? ? -74.41 45.77 182 16 SER A 51 ? ? -155.09 25.50 183 16 ASP A 53 ? ? 66.26 144.76 184 16 ARG A 54 ? ? 34.22 25.31 185 16 ASN A 56 ? ? -62.97 10.81 186 17 HIS A 6 ? ? -150.62 35.32 187 17 VAL A 9 ? ? -52.77 98.64 188 17 CYS A 12 ? ? -65.98 -149.86 189 17 PHE A 27 ? ? -32.16 98.59 190 17 ASN A 29 ? ? -164.40 22.96 191 17 LEU A 32 ? ? -68.53 32.06 192 17 SER A 40 ? ? -145.49 44.44 193 17 CYS A 41 ? ? -33.72 139.89 194 17 SER A 42 ? ? -107.04 76.26 195 17 GLU A 43 ? ? -37.18 126.35 196 17 CYS A 50 ? ? -118.67 -167.58 197 17 THR A 52 ? ? 77.69 164.96 198 17 ASP A 53 ? ? 81.33 63.78 199 17 ARG A 54 ? ? 37.23 21.35 200 17 ASN A 56 ? ? -65.59 10.54 201 18 CYS A 12 ? ? -56.39 -174.08 202 18 HIS A 13 ? ? -57.83 170.20 203 18 PRO A 26 ? ? -47.11 78.95 204 18 PHE A 27 ? ? -129.47 -86.25 205 18 ASN A 29 ? ? 48.69 179.40 206 18 LYS A 31 ? ? -84.74 44.09 207 18 LEU A 32 ? ? 42.42 -171.57 208 18 SER A 38 ? ? -170.83 127.42 209 18 SER A 40 ? ? 37.98 47.54 210 19 CYS A 3 ? ? -165.65 -162.24 211 19 VAL A 9 ? ? -56.09 101.14 212 19 CYS A 12 ? ? -59.57 -159.49 213 19 HIS A 13 ? ? -43.05 154.74 214 19 ARG A 14 ? ? -82.66 41.83 215 19 ASP A 15 ? ? -158.47 -3.14 216 19 PHE A 27 ? ? 67.87 179.04 217 19 ARG A 28 ? ? -104.09 -63.98 218 19 ASN A 29 ? ? 38.98 30.15 219 19 LEU A 30 ? ? 76.12 -162.99 220 19 LYS A 31 ? ? -109.04 57.56 221 19 SER A 51 ? ? -108.18 40.50 222 19 ASP A 53 ? ? 56.20 152.88 223 19 ARG A 54 ? ? 30.48 29.01 224 19 ASN A 56 ? ? -69.34 53.29 225 20 MET A 25 ? ? 35.64 65.06 226 20 PRO A 26 ? ? -66.84 61.65 227 20 LYS A 31 ? ? 35.82 51.76 228 20 LEU A 32 ? ? -40.92 84.70 229 20 GLU A 43 ? ? -51.88 108.78 230 20 SER A 51 ? ? -146.23 27.50 231 20 ASN A 56 ? ? -29.63 -37.68 #