data_2MK7 # _entry.id 2MK7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2MK7 pdb_00002mk7 10.2210/pdb2mk7/pdb RCSB RCSB103712 ? ? BMRB 19759 ? ? WWPDB D_1000103712 ? ? # _pdbx_database_related.db_id 19759 _pdbx_database_related.db_name BMRB _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2MK7 _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2014-02-02 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Live, D.' 1 'Borgert, A.' 2 # _citation.id primary _citation.title ;Contrasting the conformational effects of alpha-O-GalNAc and alpha-O-Man glycan protein modifications and their impact on the mucin-like region of alpha-dystroglycan. ; _citation.journal_abbrev Glycobiology _citation.journal_volume 31 _citation.page_first 649 _citation.page_last 661 _citation.year 2021 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1460-2423 _citation.journal_id_CSD 9999 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 33295623 _citation.pdbx_database_id_DOI 10.1093/glycob/cwaa112 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Borgert, A.' 1 ? primary 'Foley, B.L.' 2 ? primary 'Live, D.' 3 0000-0003-2187-6872 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn Alpha-dystroglycan 996.180 1 ? ? 'mucin domain peptide (UNP residues 419-427)' ? 2 non-polymer syn 2-acetamido-2-deoxy-alpha-D-galactopyranose 221.208 4 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Alpha-DG, aDG' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(ACE)PPTTTTKKP(NH2)' _entity_poly.pdbx_seq_one_letter_code_can XPPTTTTKKPX _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 PRO n 1 3 PRO n 1 4 THR n 1 5 THR n 1 6 THR n 1 7 THR n 1 8 LYS n 1 9 LYS n 1 10 PRO n 1 11 NH2 n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DAG1_HUMAN _struct_ref.pdbx_db_accession Q14118 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code PPTTTTKKP _struct_ref.pdbx_align_begin 419 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2MK7 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 10 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q14118 _struct_ref_seq.db_align_beg 419 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 427 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 10 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2MK7 ACE A 1 ? UNP Q14118 ? ? acetylation 1 1 1 2MK7 NH2 A 11 ? UNP Q14118 ? ? amidation 11 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A2G 'D-saccharide, alpha linking' . 2-acetamido-2-deoxy-alpha-D-galactopyranose ;N-acetyl-alpha-D-galactosamine; 2-acetamido-2-deoxy-alpha-D-galactose; 2-acetamido-2-deoxy-D-galactose; 2-acetamido-2-deoxy-galactose; N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE ; 'C8 H15 N O6' 221.208 ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-1H NOESY' 1 2 2 '3D TOCSY-NOESY' 1 3 2 '2D 1H-15N HSQC' 1 4 2 '2D 1H-13C HSQC' 1 5 2 '2D 1H-1H TOCSY' 1 6 1 '2D 1H-1H COSY' 1 7 2 '2D 1H-13C HMBC' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pH 4.5 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 288 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '2-10 mM aDG mucin domain peptide, 100% D2O' 1 '100% D2O' '2-10 mM aDG mucin domain peptide, 95% H2O/5% D2O' 2 '95% H2O/5% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 600 Varian INOVA 1 'Varian INOVA' 800 Varian INOVA 2 'Varian INOVA' 900 Varian INOVA 3 'Varian INOVA' # _pdbx_nmr_refine.entry_id 2MK7 _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 16 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2MK7 _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2MK7 _pdbx_nmr_representative.selection_criteria 'closest to the average' # _pdbx_nmr_software.authors 'Brunger A. T. et.al.' _pdbx_nmr_software.classification refinement _pdbx_nmr_software.name XPLOR-NIH _pdbx_nmr_software.version ? _pdbx_nmr_software.ordinal 1 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details 'Effects of O-GalNAc glycosylation on structure' _exptl.entry_id 2MK7 _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2MK7 _struct.title 'Tetra-O-GalNAc glycosylated mucin sequence from alpha dystroglycan mucin domain' _struct.pdbx_model_details 'closest to the average, model1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2MK7 _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' _struct_keywords.text 'mucin domain, glycoprotein, glycosylation, alpha-dystroglycan, Tn antigen, N-acetyl-galactosamine, STRUCTURAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ACE 1 C ? ? ? 1_555 A PRO 2 N ? ? A ACE 1 A PRO 2 1_555 ? ? ? ? ? ? ? 1.305 ? ? covale2 covale one ? A THR 4 OG1 ? ? ? 1_555 B A2G . C1 ? ? A THR 4 A A2G 101 1_555 ? ? ? ? ? ? ? 1.410 ? O-Glycosylation covale3 covale one ? A THR 5 OG1 ? ? ? 1_555 C A2G . C1 ? ? A THR 5 A A2G 102 1_555 ? ? ? ? ? ? ? 1.410 ? O-Glycosylation covale4 covale one ? A THR 6 OG1 ? ? ? 1_555 D A2G . C1 ? ? A THR 6 A A2G 103 1_555 ? ? ? ? ? ? ? 1.410 ? O-Glycosylation covale5 covale one ? A THR 7 OG1 ? ? ? 1_555 E A2G . C1 ? ? A THR 7 A A2G 104 1_555 ? ? ? ? ? ? ? 1.410 ? O-Glycosylation covale6 covale both ? A PRO 10 C ? ? ? 1_555 A NH2 11 N ? ? A PRO 10 A NH2 11 1_555 ? ? ? ? ? ? ? 1.306 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 2MK7 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 1 1 ACE ACE A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 PRO 3 3 3 PRO PRO A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 NH2 11 11 11 NH2 NH2 A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A2G 1 101 12 A2G A2G A . C 2 A2G 1 102 13 A2G A2G A . D 2 A2G 1 103 14 A2G A2G A . E 2 A2G 1 104 15 A2G A2G A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A THR 5 A THR 5 ? THR 'GLYCOSYLATION SITE' 2 A THR 7 A THR 7 ? THR 'GLYCOSYLATION SITE' 3 A THR 6 A THR 6 ? THR 'GLYCOSYLATION SITE' 4 A THR 4 A THR 4 ? THR 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-02-04 2 'Structure model' 2 0 2020-07-29 3 'Structure model' 2 1 2022-08-24 4 'Structure model' 2 2 2023-06-14 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Data collection' 3 2 'Structure model' 'Database references' 4 2 'Structure model' 'Derived calculations' 5 2 'Structure model' 'Structure summary' 6 3 'Structure model' 'Database references' 7 3 'Structure model' 'Structure summary' 8 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' chem_comp 3 2 'Structure model' entity 4 2 'Structure model' pdbx_chem_comp_identifier 5 2 'Structure model' pdbx_entity_nonpoly 6 2 'Structure model' struct_conn 7 2 'Structure model' struct_ref_seq_dif 8 2 'Structure model' struct_site 9 2 'Structure model' struct_site_gen 10 3 'Structure model' chem_comp 11 3 'Structure model' citation 12 3 'Structure model' citation_author 13 3 'Structure model' database_2 14 4 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.auth_atom_id' 2 2 'Structure model' '_atom_site.label_atom_id' 3 2 'Structure model' '_chem_comp.name' 4 2 'Structure model' '_chem_comp.type' 5 2 'Structure model' '_entity.pdbx_description' 6 2 'Structure model' '_pdbx_entity_nonpoly.name' 7 2 'Structure model' '_struct_conn.pdbx_dist_value' 8 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 9 2 'Structure model' '_struct_conn.pdbx_role' 10 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 11 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 12 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 13 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 14 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 15 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 16 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 17 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 18 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 19 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 20 2 'Structure model' '_struct_conn.ptnr2_label_seq_id' 21 2 'Structure model' '_struct_ref_seq_dif.details' 22 3 'Structure model' '_chem_comp.pdbx_synonyms' 23 3 'Structure model' '_citation.country' 24 3 'Structure model' '_citation.journal_abbrev' 25 3 'Structure model' '_citation.journal_id_CSD' 26 3 'Structure model' '_citation.journal_id_ISSN' 27 3 'Structure model' '_citation.journal_volume' 28 3 'Structure model' '_citation.page_first' 29 3 'Structure model' '_citation.page_last' 30 3 'Structure model' '_citation.pdbx_database_id_DOI' 31 3 'Structure model' '_citation.pdbx_database_id_PubMed' 32 3 'Structure model' '_citation.title' 33 3 'Structure model' '_citation.year' 34 3 'Structure model' '_citation_author.identifier_ORCID' 35 3 'Structure model' '_citation_author.name' 36 3 'Structure model' '_database_2.pdbx_DOI' 37 3 'Structure model' '_database_2.pdbx_database_accession' 38 4 'Structure model' '_pdbx_database_status.status_code_nmr_data' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'aDG mucin domain peptide-1' ? 2-10 mM ? 1 'aDG mucin domain peptide-2' ? 2-10 mM ? 2 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 2 PRO A 3 ? ? -44.57 165.65 2 3 PRO A 3 ? ? -44.52 91.55 3 3 LYS A 9 ? ? 19.98 74.08 4 4 PRO A 3 ? ? -44.49 163.29 5 5 PRO A 3 ? ? -44.56 105.17 6 5 LYS A 8 ? ? 42.91 96.21 7 7 PRO A 3 ? ? -44.63 150.99 8 7 LYS A 9 ? ? -175.82 46.65 9 8 PRO A 3 ? ? -42.29 151.21 10 9 PRO A 3 ? ? -42.59 156.73 11 10 PRO A 3 ? ? -43.98 155.02 12 10 LYS A 9 ? ? -175.86 46.55 13 11 PRO A 3 ? ? -44.59 95.82 14 11 LYS A 8 ? ? 46.42 -146.92 15 11 LYS A 9 ? ? 21.39 61.31 16 12 PRO A 3 ? ? -44.61 91.53 17 12 LYS A 8 ? ? 47.36 -176.98 18 12 LYS A 9 ? ? -176.72 46.44 19 13 PRO A 3 ? ? -46.37 98.87 20 14 PRO A 3 ? ? -44.26 155.71 21 14 LYS A 8 ? ? 73.08 166.21 22 15 LYS A 9 ? ? 19.94 74.12 23 16 LYS A 9 ? ? 21.36 61.22 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A2G 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpNAca A2G 'COMMON NAME' GMML 1.0 N-acetyl-a-D-galactopyranosamine A2G 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GalpNAc A2G 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GalNAc # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 2-acetamido-2-deoxy-alpha-D-galactopyranose _pdbx_entity_nonpoly.comp_id A2G #