data_2MKC # _entry.id 2MKC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2MKC pdb_00002mkc 10.2210/pdb2mkc/pdb RCSB RCSB103717 ? ? BMRB 19766 ? ? WWPDB D_1000103717 ? ? # _pdbx_database_related.db_id 19766 _pdbx_database_related.db_name BMRB _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2MKC _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2014-02-04 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wysoczanski, P.' 1 'Schneider, C.' 2 'Xiang, S.' 3 'Munari, F.' 4 'Trowitzsch, S.' 5 'Wahl, M.C.' 6 'Luhrmann, R.' 7 'Becker, S.' 8 'Zweckstetter, M.' 9 # _citation.id primary _citation.title 'Cooperative structure of the heterotrimeric pre-mRNA retention and splicing complex.' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 21 _citation.page_first 911 _citation.page_last 918 _citation.year 2014 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25218446 _citation.pdbx_database_id_DOI 10.1038/nsmb.2889 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wysoczanski, P.' 1 ? primary 'Schneider, C.' 2 ? primary 'Xiang, S.' 3 ? primary 'Munari, F.' 4 ? primary 'Trowitzsch, S.' 5 ? primary 'Wahl, M.C.' 6 ? primary 'Luhrmann, R.' 7 ? primary 'Becker, S.' 8 ? primary 'Zweckstetter, M.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'U2 snRNP component IST3' 13495.979 1 ? ? 'UNP residues 25-138' ? 2 polymer man 'Pre-mRNA leakage protein 1' 2514.782 1 ? ? 'UNP residues 22-42' ? 3 polymer man 'Pre-mRNA-splicing factor CWC26' 3828.191 1 ? ? 'UNP residues 215-245' ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Increased sodium tolerance protein 3, U2 snRNP protein SNU17' 3 'Bud site selection protein 13, Complexed with CEF1 protein 26, Synthetic lethal with CLF1 protein 7' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GAMGNEYKDNAYIYIGNLNRELTEGDILTVFSEYGVPVDVILSRDENTGESQGFAYLKYEDQRSTILAVDNLNGFKIGGR ALKIDHTFYRPKRSLQKYYEAVKEELDRDIVSKNNAEK ; ;GAMGNEYKDNAYIYIGNLNRELTEGDILTVFSEYGVPVDVILSRDENTGESQGFAYLKYEDQRSTILAVDNLNGFKIGGR ALKIDHTFYRPKRSLQKYYEAVKEELDRDIVSKNNAEK ; A ? 2 'polypeptide(L)' no no GSKSQYIDIMPDFSPSGLLELES GSKSQYIDIMPDFSPSGLLELES B ? 3 'polypeptide(L)' no no GSYDKPAPENRFAIMPGSRWDGVHRSNGFEEKW GSYDKPAPENRFAIMPGSRWDGVHRSNGFEEKW C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 MET n 1 4 GLY n 1 5 ASN n 1 6 GLU n 1 7 TYR n 1 8 LYS n 1 9 ASP n 1 10 ASN n 1 11 ALA n 1 12 TYR n 1 13 ILE n 1 14 TYR n 1 15 ILE n 1 16 GLY n 1 17 ASN n 1 18 LEU n 1 19 ASN n 1 20 ARG n 1 21 GLU n 1 22 LEU n 1 23 THR n 1 24 GLU n 1 25 GLY n 1 26 ASP n 1 27 ILE n 1 28 LEU n 1 29 THR n 1 30 VAL n 1 31 PHE n 1 32 SER n 1 33 GLU n 1 34 TYR n 1 35 GLY n 1 36 VAL n 1 37 PRO n 1 38 VAL n 1 39 ASP n 1 40 VAL n 1 41 ILE n 1 42 LEU n 1 43 SER n 1 44 ARG n 1 45 ASP n 1 46 GLU n 1 47 ASN n 1 48 THR n 1 49 GLY n 1 50 GLU n 1 51 SER n 1 52 GLN n 1 53 GLY n 1 54 PHE n 1 55 ALA n 1 56 TYR n 1 57 LEU n 1 58 LYS n 1 59 TYR n 1 60 GLU n 1 61 ASP n 1 62 GLN n 1 63 ARG n 1 64 SER n 1 65 THR n 1 66 ILE n 1 67 LEU n 1 68 ALA n 1 69 VAL n 1 70 ASP n 1 71 ASN n 1 72 LEU n 1 73 ASN n 1 74 GLY n 1 75 PHE n 1 76 LYS n 1 77 ILE n 1 78 GLY n 1 79 GLY n 1 80 ARG n 1 81 ALA n 1 82 LEU n 1 83 LYS n 1 84 ILE n 1 85 ASP n 1 86 HIS n 1 87 THR n 1 88 PHE n 1 89 TYR n 1 90 ARG n 1 91 PRO n 1 92 LYS n 1 93 ARG n 1 94 SER n 1 95 LEU n 1 96 GLN n 1 97 LYS n 1 98 TYR n 1 99 TYR n 1 100 GLU n 1 101 ALA n 1 102 VAL n 1 103 LYS n 1 104 GLU n 1 105 GLU n 1 106 LEU n 1 107 ASP n 1 108 ARG n 1 109 ASP n 1 110 ILE n 1 111 VAL n 1 112 SER n 1 113 LYS n 1 114 ASN n 1 115 ASN n 1 116 ALA n 1 117 GLU n 1 118 LYS n 2 1 GLY n 2 2 SER n 2 3 LYS n 2 4 SER n 2 5 GLN n 2 6 TYR n 2 7 ILE n 2 8 ASP n 2 9 ILE n 2 10 MET n 2 11 PRO n 2 12 ASP n 2 13 PHE n 2 14 SER n 2 15 PRO n 2 16 SER n 2 17 GLY n 2 18 LEU n 2 19 LEU n 2 20 GLU n 2 21 LEU n 2 22 GLU n 2 23 SER n 3 1 GLY n 3 2 SER n 3 3 TYR n 3 4 ASP n 3 5 LYS n 3 6 PRO n 3 7 ALA n 3 8 PRO n 3 9 GLU n 3 10 ASN n 3 11 ARG n 3 12 PHE n 3 13 ALA n 3 14 ILE n 3 15 MET n 3 16 PRO n 3 17 GLY n 3 18 SER n 3 19 ARG n 3 20 TRP n 3 21 ASP n 3 22 GLY n 3 23 VAL n 3 24 HIS n 3 25 ARG n 3 26 SER n 3 27 ASN n 3 28 GLY n 3 29 PHE n 3 30 GLU n 3 31 GLU n 3 32 LYS n 3 33 TRP n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? ;Baker's yeast ; ? 'IST3, SNU17, YIB5W, YIR005W' ? 'ATCC 204508 / S288c' ? ? ? ? 'Saccharomyces cerevisiae' 559292 ? ? ? ? ? ? ? ? 'Escherichia coli' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? plasmid ? ? ? pETM-11 ? ? 2 1 sample ? ? ? ;Baker's yeast ; ? 'PML1, YLR016C, L1591' ? 'ATCC 204508 / S288c' ? ? ? ? 'Saccharomyces cerevisiae' 559292 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample ? ? ? ;Baker's yeast ; ? 'BUD13, CWC26, SLC7, YGL174W, G1642' ? 'ATCC 204508 / S288c' ? ? ? ? 'Saccharomyces cerevisiae' 559292 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP IST3_YEAST P40565 1 ;NEYKDNAYIYIGNLNRELTEGDILTVFSEYGVPVDVILSRDENTGESQGFAYLKYEDQRSTILAVDNLNGFKIGGRALKI DHTFYRPKRSLQKYYEAVKEELDRDIVSKNNAEK ; 25 ? 2 UNP PML1_YEAST Q07930 2 KSQYIDIMPDFSPSGLLELES 22 ? 3 UNP CWC26_YEAST P46947 3 YDKPAPENRFAIMPGSRWDGVHRSNGFEEKW 215 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2MKC A 5 ? 118 ? P40565 25 ? 138 ? 5 118 2 2 2MKC B 3 ? 23 ? Q07930 22 ? 42 ? 202 222 3 3 2MKC C 3 ? 33 ? P46947 215 ? 245 ? 302 332 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2MKC GLY A 1 ? UNP P40565 ? ? 'expression tag' 1 1 1 2MKC ALA A 2 ? UNP P40565 ? ? 'expression tag' 2 2 1 2MKC MET A 3 ? UNP P40565 ? ? 'expression tag' 3 3 1 2MKC GLY A 4 ? UNP P40565 ? ? 'expression tag' 4 4 2 2MKC GLY B 1 ? UNP Q07930 ? ? 'expression tag' 200 5 2 2MKC SER B 2 ? UNP Q07930 ? ? 'expression tag' 201 6 3 2MKC GLY C 1 ? UNP P46947 ? ? 'expression tag' 300 7 3 2MKC SER C 2 ? UNP P46947 ? ? 'expression tag' 301 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '2D 1H-15N HSQC' 1 3 1 '2D 1H-15N HSQC' 1 4 1 '2D 1H-15N HSQC' 1 5 2 '2D 1H-15N HSQC' 1 6 2 '2D 1H-15N HSQC' 1 7 2 '2D 1H-15N HSQC' 1 8 2 '2D 1H-15N HSQC' 1 9 3 '2D 1H-15N HSQC' 1 10 3 '2D 1H-15N HSQC' 1 11 3 '2D 1H-15N HSQC' 1 12 3 '2D 1H-15N HSQC' 1 13 1 '3D HNCO' 1 14 1 '3D HNCA' 1 15 2 '3D HNCA' 1 16 3 '3D HNCA' 1 17 4 '3D HNCACB' 1 18 1 '3D HN(CO)CA' 1 19 2 '3D HN(CO)CA' 1 20 3 '3D HN(CO)CA' 1 21 1 '3D HCCH-TOCSY' 1 22 2 '3D HCCH-TOCSY' 1 23 3 '3D HCCH-TOCSY' 1 24 1 '3D 1H-15N NOESY' 1 25 2 '3D 1H-15N NOESY' 1 26 3 '3D 1H-15N NOESY' 1 27 5 '3D 1H-15N NOESY' 1 28 1 '3D 1H-13C NOESY aliphatic' 1 29 2 '3D 1H-13C NOESY aliphatic' 1 30 3 '3D 1H-13C NOESY aliphatic' 1 31 5 '3D 1H-13C NOESY aliphatic' 1 32 1 '3D 1H-13C NOESY aromatic' 1 33 2 '3D 1H-13C NOESY aromatic' 1 34 3 '3D 1H-13C NOESY aromatic' 1 35 5 '3D HCCH-TOCSY' 1 36 1 '3D 1H-13C NOESY filtered/edited' 1 37 2 '3D 1H-13C NOESY filtered/edited' 1 38 1 HBCBCGCDHD 1 39 1 '3D CCH-TOCSY' 1 40 3 '3D CBCA(CO)NH' 1 41 3 '3D 1H-15N NOESY ARG-centered' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pH 6.8 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 308 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system ;25 mM sodium phosphate, 250 mM NaCl, 1 mM sodium azide, 0.9-1.3 mM [U-13C; U-15N] Snu17p, 1.1-1.5 mM Bud13p, 1.4-1.9 mM Pml1p, 90% H2O/10% D2O ; 1 '90% H2O/10% D2O' ;25 mM sodium phosphate, 250 mM NaCl, 1 mM sodium azide, 1.0-1.3 mM Snu17p, 1.2-1.5 mM Bud13p, 0.8-1.0 mM [U-13C; U-15N] Pml1p, 90% H2O/10% D2O ; 2 '90% H2O/10% D2O' ;25 mM sodium phosphate, 250 mM NaCl, 1 mM sodium azide, 1.0-1.3 mM Snu17p, 0.8-1.0 mM [U-10% 13C; U-99% 15N] Bud13p, 1.5-1.9 mM Pml1p, 90% H2O/10% D2O ; 3 '90% H2O/10% D2O' ;25 mM sodium phosphate, 250 mM NaCl, 1 mM sodium azide, 0.9-1.3 mM [U-13C; U-15N; U-2H] Snu17p, 1.1-1.5 mM Bud13p, 1.4-1.9 mM Pml1p, 90% H2O/10% D2O ; 4 '90% H2O/10% D2O' ;25 mM sodium phosphate, 250 mM NaCl, 1 mM sodium azide, 1.0-1.3 mM [U-13C; U-15N; U-2H] Snu17p, 0.8-1.0 mM [U-10% 13C; U-99% 15N] Bud13p, 1.5-1.9 mM Pml1p, 90% H2O/10% D2O ; 5 '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 900 Bruker AVANCE 1 'Bruker Avance' 800 Bruker AVANCE 2 'Bruker Avance' 700 Bruker AVANCE 3 'Bruker Avance' 600 Bruker AVANCE 4 'Bruker Avance' 800 Bruker AVANCE 5 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2MKC _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details 'WATER REFINEMENT (RECOORD)' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation 0.62 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.conformers_calculated_total_number 500 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2MKC _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation 0 _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation 3.2 _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation 0.307 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method CNS # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2MKC _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA 3.0 1 'Brunger, Adams, Clore, Gros, Nilges and Read' refinement CNS 1.2 2 'Bruker Biospin' processing TopSpin 3.1 3 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe ? 4 CCPN 'data analysis' Analysis_CCPN ? 5 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2MKC _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2MKC _struct.title 'Cooperative Structure of the Heterotrimeric pre-mRNA Retention and Splicing Complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2MKC _struct_keywords.pdbx_keywords SPLICING _struct_keywords.text 'spliceosome, Snu17p, Bud13p, Pml1p, heterotrimer, cooperativity, RES, splicing, RRM, PROTEIN BINDING, Ist3p' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 23 ? SER A 32 ? THR A 23 SER A 32 1 ? 10 HELX_P HELX_P2 2 GLU A 33 ? GLY A 35 ? GLU A 33 GLY A 35 5 ? 3 HELX_P HELX_P3 3 ASP A 61 ? LEU A 72 ? ASP A 61 LEU A 72 1 ? 12 HELX_P HELX_P4 4 LEU A 95 ? VAL A 111 ? LEU A 95 VAL A 111 1 ? 17 HELX_P HELX_P5 5 LEU B 18 ? SER B 23 ? LEU B 217 SER B 222 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PRO A 37 ? ARG A 44 ? PRO A 37 ARG A 44 A 2 SER A 51 ? TYR A 59 ? SER A 51 TYR A 59 A 3 TYR A 12 ? GLY A 16 ? TYR A 12 GLY A 16 A 4 LYS A 83 ? ASP A 85 ? LYS A 83 ASP A 85 B 1 LYS A 76 ? ILE A 77 ? LYS A 76 ILE A 77 B 2 ARG A 80 ? ALA A 81 ? ARG A 80 ALA A 81 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER A 43 ? N SER A 43 O GLN A 52 ? O GLN A 52 A 2 3 O ALA A 55 ? O ALA A 55 N ILE A 15 ? N ILE A 15 A 3 4 N TYR A 14 ? N TYR A 14 O ASP A 85 ? O ASP A 85 B 1 2 N ILE A 77 ? N ILE A 77 O ARG A 80 ? O ARG A 80 # _atom_sites.entry_id 2MKC _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 MET 3 3 3 MET MET A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 ASN 5 5 5 ASN ASN A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 TYR 7 7 7 TYR TYR A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 ASP 9 9 9 ASP ASP A . n A 1 10 ASN 10 10 10 ASN ASN A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 TYR 12 12 12 TYR TYR A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 TYR 14 14 14 TYR TYR A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 ASN 17 17 17 ASN ASN A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 ASN 19 19 19 ASN ASN A . n A 1 20 ARG 20 20 20 ARG ARG A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 THR 23 23 23 THR THR A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 ASP 26 26 26 ASP ASP A . n A 1 27 ILE 27 27 27 ILE ILE A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 THR 29 29 29 THR THR A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 PHE 31 31 31 PHE PHE A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 TYR 34 34 34 TYR TYR A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 ILE 41 41 41 ILE ILE A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 SER 43 43 43 SER SER A . n A 1 44 ARG 44 44 44 ARG ARG A . n A 1 45 ASP 45 45 45 ASP ASP A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 ASN 47 47 47 ASN ASN A . n A 1 48 THR 48 48 48 THR THR A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 GLN 52 52 52 GLN GLN A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 PHE 54 54 54 PHE PHE A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 TYR 56 56 56 TYR TYR A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 GLN 62 62 62 GLN GLN A . n A 1 63 ARG 63 63 63 ARG ARG A . n A 1 64 SER 64 64 64 SER SER A . n A 1 65 THR 65 65 65 THR THR A . n A 1 66 ILE 66 66 66 ILE ILE A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 ASP 70 70 70 ASP ASP A . n A 1 71 ASN 71 71 71 ASN ASN A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 ASN 73 73 73 ASN ASN A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 PHE 75 75 75 PHE PHE A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 ILE 77 77 77 ILE ILE A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 GLY 79 79 79 GLY GLY A . n A 1 80 ARG 80 80 80 ARG ARG A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 HIS 86 86 86 HIS HIS A . n A 1 87 THR 87 87 87 THR THR A . n A 1 88 PHE 88 88 88 PHE PHE A . n A 1 89 TYR 89 89 89 TYR TYR A . n A 1 90 ARG 90 90 90 ARG ARG A . n A 1 91 PRO 91 91 91 PRO PRO A . n A 1 92 LYS 92 92 92 LYS LYS A . n A 1 93 ARG 93 93 93 ARG ARG A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 GLN 96 96 96 GLN GLN A . n A 1 97 LYS 97 97 97 LYS LYS A . n A 1 98 TYR 98 98 98 TYR TYR A . n A 1 99 TYR 99 99 99 TYR TYR A . n A 1 100 GLU 100 100 100 GLU GLU A . n A 1 101 ALA 101 101 101 ALA ALA A . n A 1 102 VAL 102 102 102 VAL VAL A . n A 1 103 LYS 103 103 103 LYS LYS A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 ASP 107 107 107 ASP ASP A . n A 1 108 ARG 108 108 108 ARG ARG A . n A 1 109 ASP 109 109 109 ASP ASP A . n A 1 110 ILE 110 110 110 ILE ILE A . n A 1 111 VAL 111 111 111 VAL VAL A . n A 1 112 SER 112 112 112 SER SER A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 ASN 114 114 114 ASN ASN A . n A 1 115 ASN 115 115 115 ASN ASN A . n A 1 116 ALA 116 116 116 ALA ALA A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 LYS 118 118 118 LYS LYS A . n B 2 1 GLY 1 200 200 GLY GLY B . n B 2 2 SER 2 201 201 SER SER B . n B 2 3 LYS 3 202 202 LYS LYS B . n B 2 4 SER 4 203 203 SER SER B . n B 2 5 GLN 5 204 204 GLN GLN B . n B 2 6 TYR 6 205 205 TYR TYR B . n B 2 7 ILE 7 206 206 ILE ILE B . n B 2 8 ASP 8 207 207 ASP ASP B . n B 2 9 ILE 9 208 208 ILE ILE B . n B 2 10 MET 10 209 209 MET MET B . n B 2 11 PRO 11 210 210 PRO PRO B . n B 2 12 ASP 12 211 211 ASP ASP B . n B 2 13 PHE 13 212 212 PHE PHE B . n B 2 14 SER 14 213 213 SER SER B . n B 2 15 PRO 15 214 214 PRO PRO B . n B 2 16 SER 16 215 215 SER SER B . n B 2 17 GLY 17 216 216 GLY GLY B . n B 2 18 LEU 18 217 217 LEU LEU B . n B 2 19 LEU 19 218 218 LEU LEU B . n B 2 20 GLU 20 219 219 GLU GLU B . n B 2 21 LEU 21 220 220 LEU LEU B . n B 2 22 GLU 22 221 221 GLU GLU B . n B 2 23 SER 23 222 222 SER SER B . n C 3 1 GLY 1 300 300 GLY GLY C . n C 3 2 SER 2 301 301 SER SER C . n C 3 3 TYR 3 302 302 TYR TYR C . n C 3 4 ASP 4 303 303 ASP ASP C . n C 3 5 LYS 5 304 304 LYS LYS C . n C 3 6 PRO 6 305 305 PRO PRO C . n C 3 7 ALA 7 306 306 ALA ALA C . n C 3 8 PRO 8 307 307 PRO PRO C . n C 3 9 GLU 9 308 308 GLU GLU C . n C 3 10 ASN 10 309 309 ASN ASN C . n C 3 11 ARG 11 310 310 ARG ARG C . n C 3 12 PHE 12 311 311 PHE PHE C . n C 3 13 ALA 13 312 312 ALA ALA C . n C 3 14 ILE 14 313 313 ILE ILE C . n C 3 15 MET 15 314 314 MET MET C . n C 3 16 PRO 16 315 315 PRO PRO C . n C 3 17 GLY 17 316 316 GLY GLY C . n C 3 18 SER 18 317 317 SER SER C . n C 3 19 ARG 19 318 318 ARG ARG C . n C 3 20 TRP 20 319 319 TRP TRP C . n C 3 21 ASP 21 320 320 ASP ASP C . n C 3 22 GLY 22 321 321 GLY GLY C . n C 3 23 VAL 23 322 322 VAL VAL C . n C 3 24 HIS 24 323 323 HIS HIS C . n C 3 25 ARG 25 324 324 ARG ARG C . n C 3 26 SER 26 325 325 SER SER C . n C 3 27 ASN 27 326 326 ASN ASN C . n C 3 28 GLY 28 327 327 GLY GLY C . n C 3 29 PHE 29 328 328 PHE PHE C . n C 3 30 GLU 30 329 329 GLU GLU C . n C 3 31 GLU 31 330 330 GLU GLU C . n C 3 32 LYS 32 331 331 LYS LYS C . n C 3 33 TRP 33 332 332 TRP TRP C . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-09-03 2 'Structure model' 1 1 2014-10-01 3 'Structure model' 1 2 2014-10-22 4 'Structure model' 1 3 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_database_status 3 4 'Structure model' pdbx_nmr_software 4 4 'Structure model' pdbx_nmr_spectrometer 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 4 'Structure model' '_pdbx_nmr_software.name' 5 4 'Structure model' '_pdbx_nmr_spectrometer.model' 6 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_entry_details.entry_id 2MKC _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ;AUTHORS STATE THAT THE ISOTOPICALLY LABELLED BIOSYNTHETIC PEPTIDES HAVE GS CLONING ARTIFACT AT THE N-TERMINI, WHICH WERE USED PRIMARILY TO DERIVE THE DATA THAT LEAD TO THE RELEVANT PARTS OF THE STRUCTURE. HOWEVER, THE NATURAL ISOTOPIC ABUNDANCE SYNTHETIC PEPTIDES WERE ALSO USED FOR SOME NMR EXPERIMENTS. THEY DO NOT HAVE GS CLONING ARTIFACT. INSTEAD, THEY HAVE ACETYL GROUP AT THE N-TERMINUS AND AMIDE AT THE C-TERMINUS. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_nmr_ensemble_rms.atom_type ? _pdbx_nmr_ensemble_rms.bond_angle_rms_dev ? _pdbx_nmr_ensemble_rms.bond_angle_rms_dev_error ? _pdbx_nmr_ensemble_rms.chain_range_begin ? _pdbx_nmr_ensemble_rms.chain_range_end ? _pdbx_nmr_ensemble_rms.coord_average_rmsd_method ? _pdbx_nmr_ensemble_rms.covalent_bond_rms_dev ? _pdbx_nmr_ensemble_rms.covalent_bond_rms_dev_error ? _pdbx_nmr_ensemble_rms.dihedral_angles_rms_dev ? _pdbx_nmr_ensemble_rms.dihedral_angles_rms_dev_error ? _pdbx_nmr_ensemble_rms.distance_rms_dev 0.0101 _pdbx_nmr_ensemble_rms.distance_rms_dev_error 0.0008 _pdbx_nmr_ensemble_rms.entry_id 2MKC _pdbx_nmr_ensemble_rms.improper_torsion_angle_rms_dev ? _pdbx_nmr_ensemble_rms.improper_torsion_angle_rms_dev_error ? _pdbx_nmr_ensemble_rms.peptide_planarity_rms_dev ? _pdbx_nmr_ensemble_rms.peptide_planarity_rms_dev_error ? _pdbx_nmr_ensemble_rms.residue_range_begin ? _pdbx_nmr_ensemble_rms.residue_range_end ? # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'sodium phosphate-1' 25 ? mM ? 1 NaCl-2 250 ? mM ? 1 'sodium azide-3' 1 ? mM ? 1 Snu17p-4 ? 0.9-1.3 mM '[U-13C; U-15N]' 1 Bud13p-5 ? 1.1-1.5 mM ? 1 Pml1p-6 ? 1.4-1.9 mM ? 1 'sodium phosphate-7' 25 ? mM ? 2 NaCl-8 250 ? mM ? 2 'sodium azide-9' 1 ? mM ? 2 Snu17p-10 ? 1.0-1.3 mM ? 2 Bud13p-11 ? 1.2-1.5 mM ? 2 Pml1p-12 ? 0.8-1.0 mM '[U-13C; U-15N]' 2 'sodium phosphate-13' 25 ? mM ? 3 NaCl-14 250 ? mM ? 3 'sodium azide-15' 1 ? mM ? 3 Snu17p-16 ? 1.0-1.3 mM ? 3 Bud13p-17 ? 0.8-1.0 mM '[U-10% 13C; U-99% 15N]' 3 Pml1p-18 ? 1.5-1.9 mM ? 3 'sodium phosphate-19' 25 ? mM ? 4 NaCl-20 250 ? mM ? 4 'sodium azide-21' 1 ? mM ? 4 Snu17p-22 ? 0.9-1.3 mM '[U-13C; U-15N; U-2H]' 4 Bud13p-23 ? 1.1-1.5 mM ? 4 Pml1p-24 ? 1.4-1.9 mM ? 4 'sodium phosphate-25' 25 ? mM ? 5 NaCl-26 250 ? mM ? 5 'sodium azide-27' 1 ? mM ? 5 Snu17p-28 ? 1.0-1.3 mM '[U-13C; U-15N; U-2H]' 5 Bud13p-29 ? 0.8-1.0 mM '[U-10% 13C; U-99% 15N]' 5 Pml1p-30 ? 1.5-1.9 mM ? 5 # _pdbx_nmr_constraints.disulfide_bond_constraints_total_count ? _pdbx_nmr_constraints.entry_id 2MKC _pdbx_nmr_constraints.hydrogen_bond_constraints_total_count 50 _pdbx_nmr_constraints.NA_alpha-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_beta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_chi-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_delta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_epsilon-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_gamma-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_other-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_sugar_pucker_constraints_total_count ? _pdbx_nmr_constraints.NOE_constraints_total 4105 _pdbx_nmr_constraints.NOE_interentity_total_count ? _pdbx_nmr_constraints.NOE_interproton_distance_evaluation ? _pdbx_nmr_constraints.NOE_intraresidue_total_count 769 _pdbx_nmr_constraints.NOE_long_range_total_count 1597 _pdbx_nmr_constraints.NOE_medium_range_total_count 775 _pdbx_nmr_constraints.NOE_motional_averaging_correction ? _pdbx_nmr_constraints.NOE_pseudoatom_corrections ? _pdbx_nmr_constraints.NOE_sequential_total_count 964 _pdbx_nmr_constraints.protein_chi_angle_constraints_total_count 0 _pdbx_nmr_constraints.protein_other_angle_constraints_total_count 0 _pdbx_nmr_constraints.protein_phi_angle_constraints_total_count 115 _pdbx_nmr_constraints.protein_psi_angle_constraints_total_count 115 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 3 HZ2 A LYS 97 ? ? OE1 A GLU 100 ? ? 1.60 2 6 OD1 A ASP 39 ? ? HZ1 A LYS 58 ? ? 1.59 3 6 HZ2 C LYS 304 ? ? OE1 C GLU 308 ? ? 1.59 4 6 HH22 A ARG 20 ? ? OE1 A GLU 50 ? ? 1.60 5 8 OD1 A ASP 109 ? ? H1 C GLY 300 ? ? 1.59 6 8 OD2 A ASP 39 ? ? HZ2 A LYS 103 ? ? 1.60 7 9 OE1 A GLU 46 ? ? HZ3 A LYS 92 ? ? 1.59 8 10 HZ1 C LYS 304 ? ? OE2 C GLU 308 ? ? 1.55 9 11 OD1 A ASP 39 ? ? HZ1 A LYS 58 ? ? 1.57 10 13 HZ3 A LYS 97 ? ? OE1 A GLU 100 ? ? 1.55 11 13 OE1 C GLU 330 ? ? HZ1 C LYS 331 ? ? 1.57 12 13 OD1 A ASP 39 ? ? HZ2 A LYS 103 ? ? 1.58 13 14 OD1 A ASP 39 ? ? HZ3 A LYS 103 ? ? 1.58 14 14 HZ3 A LYS 97 ? ? OE1 A GLU 100 ? ? 1.60 15 17 OD1 A ASP 39 ? ? HZ1 A LYS 58 ? ? 1.58 16 17 HZ2 A LYS 97 ? ? OE2 A GLU 100 ? ? 1.59 17 17 OE1 A GLU 33 ? ? HH11 C ARG 324 ? ? 1.60 18 18 OXT B SER 222 ? ? HH12 C ARG 324 ? ? 1.56 19 20 OD1 A ASP 39 ? ? HZ3 A LYS 103 ? ? 1.58 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 5 ? ? -66.52 10.93 2 1 ILE B 208 ? ? -72.54 -79.08 3 1 MET B 209 ? ? 64.83 146.58 4 1 PHE B 212 ? ? 66.55 87.11 5 1 PRO C 307 ? ? -69.90 64.88 6 1 SER C 317 ? ? -65.71 10.40 7 2 GLU A 6 ? ? -81.13 -70.18 8 2 TYR A 7 ? ? -168.03 -141.78 9 2 ASP A 9 ? ? -69.39 20.07 10 2 ASN A 17 ? ? 66.74 70.03 11 2 GLU A 117 ? ? -149.58 -71.78 12 2 GLN B 204 ? ? 67.61 111.08 13 2 ILE B 208 ? ? -85.94 -72.82 14 2 MET B 209 ? ? 72.27 159.19 15 2 ASP B 211 ? ? -105.22 -70.56 16 2 PHE B 212 ? ? 64.08 90.55 17 2 ARG C 310 ? ? 65.17 -77.42 18 2 GLU C 329 ? ? -69.14 3.61 19 3 ASN A 10 ? ? -57.75 109.36 20 3 ALA A 116 ? ? -148.29 -85.15 21 3 GLN B 204 ? ? 73.01 142.74 22 3 ILE B 208 ? ? -64.51 -75.90 23 3 MET B 209 ? ? 64.23 149.99 24 3 PHE B 212 ? ? 61.36 80.20 25 3 SER C 325 ? ? -157.21 88.66 26 3 ASN C 326 ? ? 172.39 143.84 27 4 ASP A 9 ? ? -65.10 3.62 28 4 VAL A 38 ? ? -109.63 -61.95 29 4 ASN A 71 ? ? -95.77 -60.19 30 4 LYS A 113 ? ? 167.46 75.20 31 4 GLU A 117 ? ? -66.55 -79.41 32 4 SER B 201 ? ? 69.81 -51.13 33 4 GLN B 204 ? ? 64.47 90.77 34 4 ILE B 208 ? ? -104.82 -76.53 35 4 MET B 209 ? ? 65.83 159.22 36 4 ASP B 211 ? ? -120.55 -52.88 37 4 SER C 301 ? ? -150.24 -33.57 38 4 ASN C 309 ? ? -179.66 148.15 39 4 GLU C 329 ? ? -61.25 1.25 40 5 ALA A 2 ? ? 67.48 -66.51 41 5 GLU A 6 ? ? -59.36 -71.79 42 5 ASN A 115 ? ? -163.53 -25.68 43 5 ILE B 208 ? ? -82.26 -78.62 44 5 MET B 209 ? ? 66.87 148.82 45 5 SER C 317 ? ? -67.57 -71.63 46 5 ARG C 318 ? ? -89.81 48.07 47 5 VAL C 322 ? ? -56.21 106.10 48 6 ASN A 71 ? ? -100.14 -60.60 49 6 ASN A 115 ? ? 72.68 -39.83 50 6 ILE B 208 ? ? -91.76 -80.46 51 6 MET B 209 ? ? 68.43 145.19 52 6 PRO C 307 ? ? -58.17 109.95 53 6 ASN C 326 ? ? 70.95 103.62 54 6 GLU C 330 ? ? -39.41 -31.39 55 6 LYS C 331 ? ? -76.29 -155.21 56 7 GLU A 117 ? ? 51.72 82.30 57 7 GLN B 204 ? ? 74.31 145.29 58 7 ILE B 208 ? ? -77.24 -76.61 59 7 MET B 209 ? ? 64.94 152.66 60 7 PHE B 212 ? ? 55.54 73.94 61 7 ASP C 320 ? ? -89.02 -82.50 62 7 GLU C 329 ? ? -58.88 1.73 63 8 ASP A 61 ? ? 161.54 106.31 64 8 ASN A 115 ? ? -177.02 -168.00 65 8 ILE B 208 ? ? -90.04 -77.03 66 8 MET B 209 ? ? 63.08 150.06 67 8 PRO C 307 ? ? -69.96 94.75 68 8 ARG C 310 ? ? 44.48 -91.06 69 8 ALA C 312 ? ? 76.26 61.15 70 8 ASP C 320 ? ? -91.34 -68.24 71 8 ASN C 326 ? ? -155.66 -49.74 72 8 GLU C 329 ? ? -64.20 1.74 73 9 TYR B 205 ? ? -91.51 -64.03 74 9 ILE B 208 ? ? -78.66 -71.74 75 9 MET B 209 ? ? 65.99 154.38 76 9 ASP B 211 ? ? -98.32 -60.77 77 9 PHE B 212 ? ? 60.08 83.19 78 9 PRO C 307 ? ? -69.23 79.35 79 9 ARG C 310 ? ? 59.75 -73.78 80 9 ASP C 320 ? ? -58.66 -70.77 81 9 ASN C 326 ? ? -164.87 103.91 82 9 GLU C 329 ? ? -52.11 3.36 83 9 GLU C 330 ? ? -66.61 1.12 84 10 LYS A 8 ? ? -130.16 -32.21 85 10 TYR B 205 ? ? -133.56 -103.00 86 10 ILE B 208 ? ? -92.80 -77.08 87 10 MET B 209 ? ? 62.31 146.85 88 10 TYR C 302 ? ? -58.97 109.08 89 10 ASN C 309 ? ? -63.57 87.09 90 10 SER C 317 ? ? -134.25 -45.43 91 10 ASN C 326 ? ? -170.65 -77.08 92 10 PHE C 328 ? ? -39.27 112.13 93 11 ALA A 2 ? ? -160.77 96.73 94 11 ASN A 17 ? ? 171.99 69.27 95 11 GLU A 60 ? ? -96.77 57.95 96 11 ASP A 61 ? ? -176.42 129.60 97 11 SER B 201 ? ? -168.19 99.02 98 11 GLN B 204 ? ? 74.19 128.42 99 11 TYR B 205 ? ? -88.31 -82.05 100 11 ASP B 207 ? ? -98.03 34.63 101 11 ILE B 208 ? ? -106.32 -75.13 102 11 MET B 209 ? ? 60.37 152.77 103 12 GLU A 6 ? ? -94.28 -66.73 104 12 ASN A 17 ? ? 62.81 85.25 105 12 ASN A 114 ? ? -111.08 -75.96 106 12 ILE B 208 ? ? -80.97 -72.36 107 12 MET B 209 ? ? 59.43 140.99 108 12 PHE B 212 ? ? 62.69 83.45 109 12 SER C 301 ? ? -158.28 -50.58 110 12 ASN C 309 ? ? -80.88 36.96 111 12 ARG C 310 ? ? 67.02 -47.80 112 12 ASN C 326 ? ? 178.16 -171.78 113 12 GLU C 329 ? ? -93.69 -67.58 114 13 ALA A 2 ? ? 54.86 79.03 115 13 ILE B 208 ? ? -67.04 -76.81 116 13 MET B 209 ? ? 62.75 151.93 117 13 ASP B 211 ? ? -106.97 -61.71 118 13 PHE B 212 ? ? 67.84 72.23 119 13 ASP C 303 ? ? -95.86 30.77 120 13 GLU C 329 ? ? -66.10 2.92 121 14 ASN A 17 ? ? -154.86 72.78 122 14 ASN A 114 ? ? -175.87 -55.37 123 14 GLU A 117 ? ? -154.01 -49.41 124 14 ILE B 208 ? ? -76.65 -76.29 125 14 MET B 209 ? ? 66.26 150.96 126 14 PHE B 212 ? ? 56.30 83.55 127 14 SER C 301 ? ? -53.86 -71.95 128 14 PRO C 307 ? ? -72.60 45.69 129 14 GLU C 308 ? ? -73.72 35.16 130 14 ARG C 310 ? ? 57.20 -79.95 131 14 ALA C 312 ? ? 80.70 61.17 132 14 ASP C 320 ? ? -66.18 -77.60 133 14 GLU C 330 ? ? -38.74 -22.10 134 15 ILE B 208 ? ? -80.35 -77.29 135 15 MET B 209 ? ? 65.81 152.31 136 16 ALA A 2 ? ? 65.11 99.94 137 16 ASN A 114 ? ? 73.12 88.37 138 16 ASN A 115 ? ? -154.09 -57.27 139 16 TYR B 205 ? ? -132.72 -69.82 140 16 ILE B 208 ? ? -121.73 -75.00 141 16 MET B 209 ? ? 58.17 148.08 142 16 GLU C 308 ? ? 59.58 -56.72 143 16 ASN C 309 ? ? -36.46 103.39 144 16 GLU C 329 ? ? -66.01 1.37 145 17 ASP A 61 ? ? 162.09 113.16 146 17 SER B 203 ? ? -109.99 -70.42 147 17 GLN B 204 ? ? 179.38 166.39 148 17 TYR B 205 ? ? -124.40 -94.50 149 17 ILE B 208 ? ? -98.22 -72.67 150 17 MET B 209 ? ? 65.69 141.60 151 17 PHE B 212 ? ? 52.93 70.06 152 17 ALA C 312 ? ? 62.22 60.85 153 17 ASP C 320 ? ? -89.45 -86.34 154 17 GLU C 329 ? ? -91.73 -70.37 155 17 LYS C 331 ? ? 82.12 129.68 156 18 LYS A 8 ? ? -130.51 -42.57 157 18 ASN A 17 ? ? 71.42 33.03 158 18 ASN A 47 ? ? -95.47 -60.41 159 18 TYR B 205 ? ? -124.29 -66.31 160 18 ILE B 208 ? ? -81.76 -80.05 161 18 MET B 209 ? ? 68.88 151.74 162 18 PHE B 212 ? ? 56.30 84.88 163 18 ALA C 312 ? ? 60.40 62.20 164 18 ASP C 320 ? ? -71.45 -74.72 165 18 GLU C 329 ? ? -58.18 3.87 166 19 LYS A 113 ? ? 46.48 28.32 167 19 SER B 201 ? ? -132.61 -61.05 168 19 ILE B 208 ? ? -89.54 -76.64 169 19 MET B 209 ? ? 62.24 146.40 170 19 GLU C 329 ? ? -95.96 -66.30 171 20 TYR A 7 ? ? 57.83 17.16 172 20 ASN A 47 ? ? -106.49 -61.17 173 20 ASP A 61 ? ? 175.66 118.78 174 20 SER A 112 ? ? -86.70 37.68 175 20 LYS A 113 ? ? 61.86 82.92 176 20 TYR B 205 ? ? -125.99 -58.76 177 20 ILE B 208 ? ? -87.30 -76.23 178 20 MET B 209 ? ? 72.94 144.43 179 20 SER C 301 ? ? -96.22 -77.17 180 20 ASN C 309 ? ? 75.89 160.28 181 20 ALA C 312 ? ? 60.85 62.44 182 20 VAL C 322 ? ? -51.97 105.68 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG C 324 ? ? 0.097 'SIDE CHAIN' 2 3 ARG A 80 ? ? 0.098 'SIDE CHAIN' 3 4 ARG C 324 ? ? 0.144 'SIDE CHAIN' 4 7 ARG C 318 ? ? 0.157 'SIDE CHAIN' 5 9 ARG A 44 ? ? 0.105 'SIDE CHAIN' 6 10 ARG C 310 ? ? 0.104 'SIDE CHAIN' 7 10 ARG C 324 ? ? 0.076 'SIDE CHAIN' 8 12 ARG A 80 ? ? 0.105 'SIDE CHAIN' 9 12 ARG C 310 ? ? 0.076 'SIDE CHAIN' 10 12 ARG C 324 ? ? 0.072 'SIDE CHAIN' 11 15 ARG A 108 ? ? 0.084 'SIDE CHAIN' #