data_2MKM # _entry.id 2MKM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2MKM pdb_00002mkm 10.2210/pdb2mkm/pdb RCSB RCSB103727 ? ? BMRB 19784 ? ? WWPDB D_1000103727 ? ? # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.content_type _pdbx_database_related.details 19784 BMRB unspecified . 2MKO PDB unspecified . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2MKM _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2014-02-10 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cerofolini, L.' 1 'Fragai, M.' 2 'Giachetti, A.' 3 'Limongelli, V.' 4 'Luchinat, C.' 5 'Novellino, E.' 6 'Parrinello, M.' 7 'Randazzo, A.' 8 # _citation.id primary _citation.title 'G-triplex structure and formation propensity.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 42 _citation.page_first 13393 _citation.page_last 13404 _citation.year 2014 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25378342 _citation.pdbx_database_id_DOI 10.1093/nar/gku1084 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cerofolini, L.' 1 ? primary 'Amato, J.' 2 ? primary 'Giachetti, A.' 3 ? primary 'Limongelli, V.' 4 ? primary 'Novellino, E.' 5 ? primary 'Parrinello, M.' 6 ? primary 'Fragai, M.' 7 ? primary 'Randazzo, A.' 8 ? primary 'Luchinat, C.' 9 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description "DNA_(5'-D(*GP*GP*TP*TP*GP*GP*TP*GP*TP*GP*G)-3')" _entity.formula_weight 3476.254 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DG)(DG)(DT)(DT)(DG)(DG)(DT)(DG)(DT)(DG)(DG)' _entity_poly.pdbx_seq_one_letter_code_can GGTTGGTGTGG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DG n 1 3 DT n 1 4 DT n 1 5 DG n 1 6 DG n 1 7 DT n 1 8 DG n 1 9 DT n 1 10 DG n 1 11 DG n # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 2MKM _struct_ref.pdbx_db_accession 2MKM _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code GGTTGGTGTGG _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2MKM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 11 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 2MKM _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 11 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 11 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D DQF-COSY' 1 2 1 '2D 1H-1H TOCSY' 1 3 1 '2D 1H-1H NOESY' 1 4 1 '2D 1H-1H ROESY' 1 5 1 '2D JR-HMBC' 1 6 1 E.COSY 1 7 1 '2D 31P-1H HSQC' 1 8 1 '2D 31P-1H COSY' 1 9 1 '2D 13C-1H HSQC' 1 10 1 IPAP # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.08 _pdbx_nmr_exptl_sample_conditions.pH 7 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 274 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents ;0.7 mM DNA (5'-D(*GP*GP*TP*TP*GP*GP*TP*GP*TP*GP*G)-3'), 70 mM potassium chloride, 10 mM potassium phosphate, 0.2 mM EDTA, 90% H2O/10% D2O ; _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 900 Bruker AVANCE 1 'Bruker Avance' 800 Bruker AVANCE 2 'Bruker Avance' 700 Bruker AVANCE 3 'Bruker Avance' 600 Bruker AVANCE 4 'Bruker Avance' 500 Bruker DRX 5 'Bruker DRX' 950 Bruker AVANCE 6 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2MKM _pdbx_nmr_refine.method 'restrained Molecular Dynamics (rMD)' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 400 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2MKM _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2MKM _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Schwieters, Kuszewski, Tjandra and Clore' 'structure solution' 'X-PLOR NIH' ? 1 'Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, Kollman' refinement Amber ? 2 'Keller and Wuthrich' 'chemical shift assignment' CARA 2.1 3 'Bruker Biospin' collection TopSpin ? 4 'Bruker Biospin' processing TopSpin ? 5 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2MKM _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2MKM _struct.title 'G-triplex structure and formation propensity' _struct.pdbx_model_details 'closest to the average, model1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2MKM _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'G-triplex, G-triad, DNA' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 A DG 6 O6 ? ? A DG 1 A DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 A DG 6 N7 ? ? A DG 1 A DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog3 hydrog ? ? A DG 2 N7 ? ? ? 1_555 A DG 5 N2 ? ? A DG 2 A DG 5 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? A DG 2 O6 ? ? ? 1_555 A DG 5 N1 ? ? A DG 2 A DG 5 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? A DG 5 N7 ? ? ? 1_555 A DG 11 N2 ? ? A DG 5 A DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? A DG 5 O6 ? ? ? 1_555 A DG 11 N1 ? ? A DG 5 A DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A DT 7 N3 ? ? ? 1_555 A DG 10 O6 ? ? A DT 7 A DG 10 1_555 ? ? ? ? ? ? 'DT-DG MISPAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 2MKM _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG DG A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DT 3 3 3 DT DT A . n A 1 4 DT 4 4 4 DT DT A . n A 1 5 DG 5 5 5 DG DG A . n A 1 6 DG 6 6 6 DG DG A . n A 1 7 DT 7 7 7 DT DT A . n A 1 8 DG 8 8 8 DG DG A . n A 1 9 DT 9 9 9 DT DT A . n A 1 10 DG 10 10 10 DG DG A . n A 1 11 DG 11 11 11 DG DG A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-11-19 2 'Structure model' 1 1 2014-12-10 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' pdbx_nmr_software 4 3 'Structure model' pdbx_nmr_spectrometer # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 3 'Structure model' '_pdbx_nmr_software.name' 5 3 'Structure model' '_pdbx_nmr_spectrometer.model' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id ;DNA (5'-D(*GP*GP*TP*TP*GP*GP*TP*GP*TP*GP*G)-3')-1 ; 0.7 ? mM ? 1 'potassium chloride-2' 70 ? mM ? 1 'potassium phosphate-3' 10 ? mM ? 1 EDTA-4 0.2 ? mM ? 1 # _pdbx_nmr_constraints.disulfide_bond_constraints_total_count ? _pdbx_nmr_constraints.entry_id 2MKM _pdbx_nmr_constraints.hydrogen_bond_constraints_total_count 22 _pdbx_nmr_constraints.NA_alpha-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_beta-angle_constraints_total_count 6 _pdbx_nmr_constraints.NA_chi-angle_constraints_total_count 11 _pdbx_nmr_constraints.NA_delta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_epsilon-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_gamma-angle_constraints_total_count 9 _pdbx_nmr_constraints.NA_other-angle_constraints_total_count 11 _pdbx_nmr_constraints.NA_sugar_pucker_constraints_total_count 30 _pdbx_nmr_constraints.NOE_constraints_total ? _pdbx_nmr_constraints.NOE_interentity_total_count ? _pdbx_nmr_constraints.NOE_interproton_distance_evaluation ? _pdbx_nmr_constraints.NOE_intraresidue_total_count ? _pdbx_nmr_constraints.NOE_long_range_total_count ? _pdbx_nmr_constraints.NOE_medium_range_total_count ? _pdbx_nmr_constraints.NOE_motional_averaging_correction ? _pdbx_nmr_constraints.NOE_pseudoatom_corrections ? _pdbx_nmr_constraints.NOE_sequential_total_count ? _pdbx_nmr_constraints.protein_chi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_other_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_phi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_psi_angle_constraints_total_count ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 111.55 108.30 3.25 0.30 N 2 1 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 113.55 108.30 5.25 0.30 N 3 1 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DT 3 ? ? 127.07 119.70 7.37 1.20 Y 4 1 "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 114.17 108.30 5.87 0.30 N 5 1 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 119.30 122.90 -3.60 0.60 N 6 1 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 115.53 108.30 7.23 0.30 N 7 1 N3 A DT 4 ? ? C2 A DT 4 ? ? O2 A DT 4 ? ? 117.93 122.30 -4.37 0.60 N 8 1 "C3'" A DT 4 ? ? "O3'" A DT 4 ? ? P A DG 5 ? ? 129.11 119.70 9.41 1.20 Y 9 1 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.60 108.30 2.30 0.30 N 10 1 "C3'" A DG 6 ? ? "O3'" A DG 6 ? ? P A DT 7 ? ? 127.25 119.70 7.55 1.20 Y 11 1 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 113.58 108.30 5.28 0.30 N 12 1 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.23 122.90 -3.67 0.60 N 13 1 "C3'" A DG 8 ? ? "O3'" A DG 8 ? ? P A DT 9 ? ? 128.21 119.70 8.51 1.20 Y 14 1 N3 A DT 9 ? ? C2 A DT 9 ? ? O2 A DT 9 ? ? 118.51 122.30 -3.79 0.60 N 15 1 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 118.47 122.90 -4.43 0.60 N 16 1 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 119.63 108.30 11.33 0.30 N 17 1 N1 A DG 10 ? ? C6 A DG 10 ? ? O6 A DG 10 ? ? 116.02 119.90 -3.88 0.60 N 18 1 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 110.75 108.30 2.45 0.30 N 19 2 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 112.56 108.30 4.26 0.30 N 20 2 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 114.02 108.30 5.72 0.30 N 21 2 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 119.24 122.90 -3.66 0.60 N 22 2 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 115.46 108.30 7.16 0.30 N 23 2 "C3'" A DT 4 ? ? "O3'" A DT 4 ? ? P A DG 5 ? ? 127.64 119.70 7.94 1.20 Y 24 2 N7 A DG 5 ? ? C8 A DG 5 ? ? N9 A DG 5 ? ? 116.17 113.10 3.07 0.50 N 25 2 C8 A DG 5 ? ? N9 A DG 5 ? ? C4 A DG 5 ? ? 103.89 106.40 -2.51 0.40 N 26 2 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 113.24 108.30 4.94 0.30 N 27 2 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.43 108.30 2.13 0.30 N 28 2 N3 A DT 7 ? ? C2 A DT 7 ? ? O2 A DT 7 ? ? 118.39 122.30 -3.91 0.60 N 29 2 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 118.85 122.90 -4.05 0.60 N 30 2 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 112.24 108.30 3.94 0.30 N 31 2 "C3'" A DG 8 ? ? "O3'" A DG 8 ? ? P A DT 9 ? ? 128.30 119.70 8.60 1.20 Y 32 2 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 110.95 108.30 2.65 0.30 N 33 2 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 117.99 122.90 -4.91 0.60 N 34 2 "C3'" A DG 10 ? ? "C2'" A DG 10 ? ? "C1'" A DG 10 ? ? 97.59 102.40 -4.81 0.80 N 35 2 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 123.00 108.30 14.70 0.30 N 36 3 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 113.03 108.30 4.73 0.30 N 37 3 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 113.45 108.30 5.15 0.30 N 38 3 N3 A DT 3 ? ? C2 A DT 3 ? ? O2 A DT 3 ? ? 117.86 122.30 -4.44 0.60 N 39 3 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 119.14 122.90 -3.76 0.60 N 40 3 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.71 108.30 3.41 0.30 N 41 3 N3 A DT 4 ? ? C2 A DT 4 ? ? O2 A DT 4 ? ? 118.18 122.30 -4.12 0.60 N 42 3 N3 A DG 5 ? ? C4 A DG 5 ? ? C5 A DG 5 ? ? 125.48 128.60 -3.12 0.50 N 43 3 N7 A DG 5 ? ? C8 A DG 5 ? ? N9 A DG 5 ? ? 116.24 113.10 3.14 0.50 N 44 3 C8 A DG 5 ? ? N9 A DG 5 ? ? C4 A DG 5 ? ? 103.87 106.40 -2.53 0.40 N 45 3 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 114.46 108.30 6.16 0.30 N 46 3 "C3'" A DG 6 ? ? "O3'" A DG 6 ? ? P A DT 7 ? ? 127.58 119.70 7.88 1.20 Y 47 3 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.62 108.30 2.32 0.30 N 48 3 N3 A DT 7 ? ? C2 A DT 7 ? ? O2 A DT 7 ? ? 118.13 122.30 -4.17 0.60 N 49 3 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 110.62 108.30 2.32 0.30 N 50 3 "C3'" A DG 8 ? ? "O3'" A DG 8 ? ? P A DT 9 ? ? 127.10 119.70 7.40 1.20 Y 51 3 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 110.94 108.30 2.64 0.30 N 52 3 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 118.70 122.90 -4.20 0.60 N 53 3 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 122.61 108.30 14.31 0.30 N 54 3 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 110.62 108.30 2.32 0.30 N 55 4 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 111.84 108.30 3.54 0.30 N 56 4 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 113.54 108.30 5.24 0.30 N 57 4 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 119.07 122.90 -3.83 0.60 N 58 4 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 115.07 108.30 6.77 0.30 N 59 4 N3 A DT 4 ? ? C2 A DT 4 ? ? O2 A DT 4 ? ? 118.61 122.30 -3.69 0.60 N 60 4 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.92 108.30 2.62 0.30 N 61 4 "C3'" A DG 6 ? ? "O3'" A DG 6 ? ? P A DT 7 ? ? 127.75 119.70 8.05 1.20 Y 62 4 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 112.52 108.30 4.22 0.30 N 63 4 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 112.27 108.30 3.97 0.30 N 64 4 "C3'" A DG 8 ? ? "O3'" A DG 8 ? ? P A DT 9 ? ? 127.53 119.70 7.83 1.20 Y 65 4 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 118.87 122.90 -4.03 0.60 N 66 4 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 121.77 108.30 13.47 0.30 N 67 4 N1 A DG 11 ? ? C6 A DG 11 ? ? O6 A DG 11 ? ? 116.22 119.90 -3.68 0.60 N 68 5 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 113.42 108.30 5.12 0.30 N 69 5 N1 A DG 2 ? ? C6 A DG 2 ? ? O6 A DG 2 ? ? 115.95 119.90 -3.95 0.60 N 70 5 N3 A DT 3 ? ? C2 A DT 3 ? ? O2 A DT 3 ? ? 118.31 122.30 -3.99 0.60 N 71 5 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 114.26 108.30 5.96 0.30 N 72 5 "C3'" A DT 4 ? ? "O3'" A DT 4 ? ? P A DG 5 ? ? 129.26 119.70 9.56 1.20 Y 73 5 N7 A DG 5 ? ? C8 A DG 5 ? ? N9 A DG 5 ? ? 116.17 113.10 3.07 0.50 N 74 5 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.83 108.30 2.53 0.30 N 75 5 "C3'" A DG 6 ? ? "O3'" A DG 6 ? ? P A DT 7 ? ? 127.53 119.70 7.83 1.20 Y 76 5 "C3'" A DT 7 ? ? "C2'" A DT 7 ? ? "C1'" A DT 7 ? ? 97.13 102.40 -5.27 0.80 N 77 5 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 113.63 108.30 5.33 0.30 N 78 5 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.25 122.90 -3.65 0.60 N 79 5 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 111.26 108.30 2.96 0.30 N 80 5 "C3'" A DG 8 ? ? "O3'" A DG 8 ? ? P A DT 9 ? ? 129.81 119.70 10.11 1.20 Y 81 5 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 111.40 108.30 3.10 0.30 N 82 5 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 118.53 122.90 -4.37 0.60 N 83 5 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 121.04 108.30 12.74 0.30 N 84 5 "C3'" A DG 10 ? ? "O3'" A DG 10 ? ? P A DG 11 ? ? 126.90 119.70 7.20 1.20 Y 85 6 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 111.11 108.30 2.81 0.30 N 86 6 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 114.31 108.30 6.01 0.30 N 87 6 "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 112.37 108.30 4.07 0.30 N 88 6 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 119.21 122.90 -3.69 0.60 N 89 6 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 115.85 108.30 7.55 0.30 N 90 6 N3 A DT 4 ? ? C2 A DT 4 ? ? O2 A DT 4 ? ? 118.22 122.30 -4.08 0.60 N 91 6 "C3'" A DT 4 ? ? "O3'" A DT 4 ? ? P A DG 5 ? ? 128.49 119.70 8.79 1.20 Y 92 6 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.78 108.30 2.48 0.30 N 93 6 C5 A DG 6 ? ? C6 A DG 6 ? ? N1 A DG 6 ? ? 114.59 111.50 3.09 0.50 N 94 6 "C3'" A DG 6 ? ? "O3'" A DG 6 ? ? P A DT 7 ? ? 127.76 119.70 8.06 1.20 Y 95 6 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.96 108.30 3.66 0.30 N 96 6 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.10 122.90 -3.80 0.60 N 97 6 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 115.10 108.30 6.80 0.30 N 98 6 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 118.78 122.90 -4.12 0.60 N 99 6 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 114.12 108.30 5.82 0.30 N 100 6 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 110.85 108.30 2.55 0.30 N 101 7 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 111.51 108.30 3.21 0.30 N 102 7 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 113.22 108.30 4.92 0.30 N 103 7 N3 A DT 3 ? ? C2 A DT 3 ? ? O2 A DT 3 ? ? 118.25 122.30 -4.05 0.60 N 104 7 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.62 108.30 2.32 0.30 N 105 7 N3 A DT 4 ? ? C2 A DT 4 ? ? O2 A DT 4 ? ? 118.25 122.30 -4.05 0.60 N 106 7 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.04 122.90 -3.86 0.60 N 107 7 "C3'" A DT 4 ? ? "O3'" A DT 4 ? ? P A DG 5 ? ? 128.03 119.70 8.33 1.20 Y 108 7 N3 A DG 5 ? ? C4 A DG 5 ? ? C5 A DG 5 ? ? 125.51 128.60 -3.09 0.50 N 109 7 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 112.01 108.30 3.71 0.30 N 110 7 N3 A DT 7 ? ? C2 A DT 7 ? ? O2 A DT 7 ? ? 118.47 122.30 -3.83 0.60 N 111 7 "C3'" A DT 7 ? ? "O3'" A DT 7 ? ? P A DG 8 ? ? 126.93 119.70 7.23 1.20 Y 112 7 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 116.40 108.30 8.10 0.30 N 113 7 N1 A DG 8 ? ? C6 A DG 8 ? ? O6 A DG 8 ? ? 116.20 119.90 -3.70 0.60 N 114 7 C4 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 122.73 119.00 3.73 0.60 N 115 7 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 116.83 122.90 -6.07 0.60 N 116 7 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 121.38 108.30 13.08 0.30 N 117 8 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 111.70 108.30 3.40 0.30 N 118 8 "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 110.42 108.30 2.12 0.30 N 119 8 N3 A DT 3 ? ? C2 A DT 3 ? ? O2 A DT 3 ? ? 118.69 122.30 -3.61 0.60 N 120 8 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 119.19 122.90 -3.71 0.60 N 121 8 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 112.94 108.30 4.64 0.30 N 122 8 N3 A DT 4 ? ? C2 A DT 4 ? ? O2 A DT 4 ? ? 118.00 122.30 -4.30 0.60 N 123 8 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.13 108.30 1.83 0.30 N 124 8 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.52 108.30 2.22 0.30 N 125 8 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.66 108.30 3.36 0.30 N 126 8 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.12 122.90 -3.78 0.60 N 127 8 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 110.70 108.30 2.40 0.30 N 128 8 "C3'" A DG 8 ? ? "O3'" A DG 8 ? ? P A DT 9 ? ? 128.47 119.70 8.77 1.20 Y 129 8 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 110.51 108.30 2.21 0.30 N 130 8 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 119.04 122.90 -3.86 0.60 N 131 8 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 120.56 108.30 12.26 0.30 N 132 8 N1 A DG 10 ? ? C6 A DG 10 ? ? O6 A DG 10 ? ? 116.02 119.90 -3.88 0.60 N 133 8 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 110.90 108.30 2.60 0.30 N 134 9 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 111.84 108.30 3.54 0.30 N 135 9 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 113.29 108.30 4.99 0.30 N 136 9 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 119.19 122.90 -3.71 0.60 N 137 9 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 115.59 108.30 7.29 0.30 N 138 9 N3 A DT 4 ? ? C2 A DT 4 ? ? O2 A DT 4 ? ? 117.26 122.30 -5.04 0.60 N 139 9 "C3'" A DT 4 ? ? "O3'" A DT 4 ? ? P A DG 5 ? ? 128.11 119.70 8.41 1.20 Y 140 9 N3 A DG 5 ? ? C4 A DG 5 ? ? C5 A DG 5 ? ? 125.03 128.60 -3.57 0.50 N 141 9 C8 A DG 5 ? ? N9 A DG 5 ? ? C4 A DG 5 ? ? 103.65 106.40 -2.75 0.40 N 142 9 "C3'" A DG 5 ? ? "O3'" A DG 5 ? ? P A DG 6 ? ? 127.25 119.70 7.55 1.20 Y 143 9 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 115.04 108.30 6.74 0.30 N 144 9 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 113.03 108.30 4.73 0.30 N 145 9 N3 A DT 7 ? ? C2 A DT 7 ? ? O2 A DT 7 ? ? 118.52 122.30 -3.78 0.60 N 146 9 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 112.31 108.30 4.01 0.30 N 147 9 N1 A DG 8 ? ? C6 A DG 8 ? ? O6 A DG 8 ? ? 116.16 119.90 -3.74 0.60 N 148 9 "C3'" A DG 8 ? ? "O3'" A DG 8 ? ? P A DT 9 ? ? 128.19 119.70 8.49 1.20 Y 149 9 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 110.87 108.30 2.57 0.30 N 150 9 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 118.38 122.90 -4.52 0.60 N 151 9 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 122.22 108.30 13.92 0.30 N 152 10 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 114.17 108.30 5.87 0.30 N 153 10 N3 A DT 3 ? ? C2 A DT 3 ? ? O2 A DT 3 ? ? 118.27 122.30 -4.03 0.60 N 154 10 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 119.24 122.90 -3.66 0.60 N 155 10 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 112.91 108.30 4.61 0.30 N 156 10 N3 A DT 4 ? ? C2 A DT 4 ? ? O2 A DT 4 ? ? 118.43 122.30 -3.87 0.60 N 157 10 "C3'" A DT 4 ? ? "O3'" A DT 4 ? ? P A DG 5 ? ? 128.57 119.70 8.87 1.20 Y 158 10 C8 A DG 5 ? ? N9 A DG 5 ? ? C4 A DG 5 ? ? 103.96 106.40 -2.44 0.40 N 159 10 N3 A DG 5 ? ? C2 A DG 5 ? ? N2 A DG 5 ? ? 115.39 119.90 -4.51 0.70 N 160 10 "C3'" A DG 5 ? ? "O3'" A DG 5 ? ? P A DG 6 ? ? 127.52 119.70 7.82 1.20 Y 161 10 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 113.54 108.30 5.24 0.30 N 162 10 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.12 122.90 -3.78 0.60 N 163 10 "C3'" A DT 7 ? ? "O3'" A DT 7 ? ? P A DG 8 ? ? 126.91 119.70 7.21 1.20 Y 164 10 "O4'" A DG 8 ? ? "C4'" A DG 8 ? ? "C3'" A DG 8 ? ? 109.71 106.00 3.71 0.60 N 165 10 "C3'" A DG 8 ? ? "O3'" A DG 8 ? ? P A DT 9 ? ? 127.53 119.70 7.83 1.20 Y 166 10 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 117.84 122.90 -5.06 0.60 N 167 10 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 116.45 108.30 8.15 0.30 N 168 10 N1 A DG 10 ? ? C6 A DG 10 ? ? O6 A DG 10 ? ? 115.49 119.90 -4.41 0.60 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DG A 2 ? ? 0.053 'SIDE CHAIN' 2 1 DT A 3 ? ? 0.110 'SIDE CHAIN' 3 1 DT A 4 ? ? 0.118 'SIDE CHAIN' 4 1 DG A 5 ? ? 0.078 'SIDE CHAIN' 5 1 DT A 7 ? ? 0.079 'SIDE CHAIN' 6 1 DG A 8 ? ? 0.096 'SIDE CHAIN' 7 1 DT A 9 ? ? 0.075 'SIDE CHAIN' 8 1 DG A 10 ? ? 0.062 'SIDE CHAIN' 9 2 DT A 4 ? ? 0.139 'SIDE CHAIN' 10 2 DG A 5 ? ? 0.090 'SIDE CHAIN' 11 2 DG A 6 ? ? 0.088 'SIDE CHAIN' 12 2 DG A 8 ? ? 0.076 'SIDE CHAIN' 13 2 DG A 10 ? ? 0.073 'SIDE CHAIN' 14 3 DG A 2 ? ? 0.078 'SIDE CHAIN' 15 3 DT A 4 ? ? 0.092 'SIDE CHAIN' 16 3 DG A 5 ? ? 0.051 'SIDE CHAIN' 17 3 DG A 6 ? ? 0.082 'SIDE CHAIN' 18 3 DG A 8 ? ? 0.078 'SIDE CHAIN' 19 4 DG A 2 ? ? 0.051 'SIDE CHAIN' 20 4 DT A 4 ? ? 0.122 'SIDE CHAIN' 21 4 DG A 5 ? ? 0.053 'SIDE CHAIN' 22 4 DG A 6 ? ? 0.046 'SIDE CHAIN' 23 4 DG A 8 ? ? 0.092 'SIDE CHAIN' 24 4 DG A 10 ? ? 0.051 'SIDE CHAIN' 25 5 DG A 5 ? ? 0.086 'SIDE CHAIN' 26 5 DG A 6 ? ? 0.063 'SIDE CHAIN' 27 5 DG A 8 ? ? 0.122 'SIDE CHAIN' 28 5 DG A 10 ? ? 0.089 'SIDE CHAIN' 29 6 DG A 2 ? ? 0.062 'SIDE CHAIN' 30 6 DT A 4 ? ? 0.082 'SIDE CHAIN' 31 6 DG A 5 ? ? 0.065 'SIDE CHAIN' 32 6 DG A 8 ? ? 0.109 'SIDE CHAIN' 33 7 DG A 2 ? ? 0.076 'SIDE CHAIN' 34 7 DT A 3 ? ? 0.087 'SIDE CHAIN' 35 7 DG A 5 ? ? 0.060 'SIDE CHAIN' 36 7 DG A 6 ? ? 0.061 'SIDE CHAIN' 37 7 DT A 7 ? ? 0.060 'SIDE CHAIN' 38 7 DG A 8 ? ? 0.071 'SIDE CHAIN' 39 7 DG A 10 ? ? 0.058 'SIDE CHAIN' 40 8 DT A 3 ? ? 0.061 'SIDE CHAIN' 41 8 DT A 7 ? ? 0.080 'SIDE CHAIN' 42 8 DG A 8 ? ? 0.106 'SIDE CHAIN' 43 8 DG A 10 ? ? 0.048 'SIDE CHAIN' 44 9 DG A 2 ? ? 0.056 'SIDE CHAIN' 45 9 DT A 3 ? ? 0.184 'SIDE CHAIN' 46 9 DT A 4 ? ? 0.143 'SIDE CHAIN' 47 9 DG A 6 ? ? 0.099 'SIDE CHAIN' 48 9 DT A 7 ? ? 0.063 'SIDE CHAIN' 49 9 DG A 8 ? ? 0.070 'SIDE CHAIN' 50 9 DG A 10 ? ? 0.094 'SIDE CHAIN' 51 10 DG A 2 ? ? 0.057 'SIDE CHAIN' 52 10 DT A 3 ? ? 0.095 'SIDE CHAIN' 53 10 DT A 4 ? ? 0.059 'SIDE CHAIN' 54 10 DG A 5 ? ? 0.047 'SIDE CHAIN' 55 10 DG A 8 ? ? 0.138 'SIDE CHAIN' 56 10 DT A 9 ? ? 0.089 'SIDE CHAIN' 57 10 DG A 10 ? ? 0.049 'SIDE CHAIN' # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2MKM 'double helix' 2MKM 'hairpin loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 5 1_555 A DG 11 1_555 -2.921 -2.698 0.085 9.155 -11.753 79.508 1 A_DG5:DG11_A A 5 ? A 11 ? 6 3 1 A DG 6 1_555 A DG 1 1_555 -2.583 -2.377 -0.675 1.120 6.182 89.987 2 A_DG6:DG1_A A 6 ? A 1 ? 6 3 1 A DT 7 1_555 A DG 10 1_555 0.790 -0.341 0.856 50.034 -40.735 -78.243 3 A_DT7:DG10_A A 7 ? A 10 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 5 1_555 A DG 11 1_555 A DG 6 1_555 A DG 1 1_555 0.437 3.283 -0.868 -167.148 44.697 -91.512 -1.549 0.570 -0.920 -22.604 -84.529 -175.132 1 AA_DG5DG6:DG1DG11_AA A 5 ? A 11 ? A 6 ? A 1 ? 1 A DG 6 1_555 A DG 1 1_555 A DT 7 1_555 A DG 10 1_555 -0.508 -1.819 2.417 -29.071 -10.496 116.951 -0.973 0.074 2.562 -6.102 16.901 119.475 2 AA_DG6DT7:DG10DG1_AA A 6 ? A 1 ? A 7 ? A 10 ? #