data_2MKS # _entry.id 2MKS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2MKS RCSB RCSB103733 BMRB 19792 WWPDB D_1000103733 # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.content_type _pdbx_database_related.details 19792 BMRB unspecified . JCSG-423933 TargetTrack unspecified . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2MKS _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2014-02-14 _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Serrano, P.' 1 'Geralt, M.' 2 'Wuthrich, K.' 3 'Joint Center for Structural Genomics (JCSG)' 4 'Partnership for T-Cell Biology (TCELL)' 5 # _citation.id primary _citation.title 'NMR structure of the first RRM domain of the protein RBM39 from Homo sapiens' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Serrano, P.' 1 primary 'Wuthrich, K.' 2 primary 'Geralt, M.' 3 primary 'Dutta, S.K.' 4 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'RNA-binding motif protein, X chromosome' _entity.formula_weight 10093.445 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'RRM domain residues 1-90' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Glycoprotein p43, Heterogeneous nuclear ribonucleoprotein G, hnRNP G, RNA-binding motif protein, X chromosome, N-terminally processed ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GHMVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKA IKVEQATKPSFE ; _entity_poly.pdbx_seq_one_letter_code_can ;GHMVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKA IKVEQATKPSFE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier JCSG-423933 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 HIS n 1 3 MET n 1 4 VAL n 1 5 GLU n 1 6 ALA n 1 7 ASP n 1 8 ARG n 1 9 PRO n 1 10 GLY n 1 11 LYS n 1 12 LEU n 1 13 PHE n 1 14 ILE n 1 15 GLY n 1 16 GLY n 1 17 LEU n 1 18 ASN n 1 19 THR n 1 20 GLU n 1 21 THR n 1 22 ASN n 1 23 GLU n 1 24 LYS n 1 25 ALA n 1 26 LEU n 1 27 GLU n 1 28 ALA n 1 29 VAL n 1 30 PHE n 1 31 GLY n 1 32 LYS n 1 33 TYR n 1 34 GLY n 1 35 ARG n 1 36 ILE n 1 37 VAL n 1 38 GLU n 1 39 VAL n 1 40 LEU n 1 41 LEU n 1 42 MET n 1 43 LYS n 1 44 ASP n 1 45 ARG n 1 46 GLU n 1 47 THR n 1 48 ASN n 1 49 LYS n 1 50 SER n 1 51 ARG n 1 52 GLY n 1 53 PHE n 1 54 ALA n 1 55 PHE n 1 56 VAL n 1 57 THR n 1 58 PHE n 1 59 GLU n 1 60 SER n 1 61 PRO n 1 62 ALA n 1 63 ASP n 1 64 ALA n 1 65 LYS n 1 66 ASP n 1 67 ALA n 1 68 ALA n 1 69 ARG n 1 70 ASP n 1 71 MET n 1 72 ASN n 1 73 GLY n 1 74 LYS n 1 75 SER n 1 76 LEU n 1 77 ASP n 1 78 GLY n 1 79 LYS n 1 80 ALA n 1 81 ILE n 1 82 LYS n 1 83 VAL n 1 84 GLU n 1 85 GLN n 1 86 ALA n 1 87 THR n 1 88 LYS n 1 89 PRO n 1 90 SER n 1 91 PHE n 1 92 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'RBMX, HNRPG, RBMXP1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant DE3 _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector pSpeedET _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RBMX_HUMAN _struct_ref.pdbx_db_accession P38159 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIK VEQATKPSFE ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2MKS _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 92 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P38159 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 90 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 3 _struct_ref_seq.pdbx_auth_seq_align_end 92 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2MKS GLY A 1 ? UNP P38159 ? ? 'EXPRESSION TAG' 1 1 1 2MKS HIS A 2 ? UNP P38159 ? ? 'EXPRESSION TAG' 2 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '3D 1H-13C NOESY aliphatic' 1 3 1 '3D 1H-13C NOESY aromatic' 1 4 1 '3D 1H-15N NOESY' 1 5 1 '4D APSY HACANH' 1 6 1 '5D APSY CBCACONH' 1 7 1 '5D APSY HACACONH' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.220 _pdbx_nmr_exptl_sample_conditions.pH 5 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents ;1.2 mM [U-98% 13C; U-98% 15N] protein, 100 mM sodium chloride, 10 mM [U-99% 2H] sodium acetate, 5 mM sodium azide, 2 mM DTT, 95% H2O/5% D2O ; _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '95% H2O/5% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 600 Bruker Avance 1 'Bruker Avance' 800 Bruker Avance 2 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2MKS _pdbx_nmr_refine.method 'molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.conformers_calculated_total_number 80 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2MKS _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2MKS _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Guntert P.' refinement CYANA ? 1 'Luginbuhl, Guntert, Billeter and Wuthrich' refinement OPALp ? 2 'Bruker Biospin' collection TOPSPIN ? 3 'Bruker Biospin' processing TOPSPIN ? 4 'Keller and Wuthrich' 'data analysis' CAra ? 5 'Keller and Wuthrich' 'chemical shift assignment' CAra ? 6 'UNIO Herrmann and Wuthrich' 'chemical shift assignment' UNIO ? 7 'UNIO Herrmann and Wuthrich' 'structure solution' UNIO ? 8 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2MKS _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2MKS _struct.title 'NMR structure of the RRM domain of RBMX from homo sapiens' _struct.pdbx_descriptor 'RNA-binding motif protein, X chromosome' _struct.pdbx_model_details 'lowest energy, model1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2MKS _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.text ;T-Cell, PSI-Biology, RNA binding protein, Structural Genomics, Joint Center for Structural Genomics, JCSG, Partnership for T-Cell Biology, TCELL ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 22 ? GLY A 31 ? ASN A 22 GLY A 31 1 ? 10 HELX_P HELX_P2 2 LYS A 32 ? GLY A 34 ? LYS A 32 GLY A 34 5 ? 3 HELX_P HELX_P3 3 SER A 60 ? ALA A 67 ? SER A 60 ALA A 67 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 38 ? LEU A 40 ? GLU A 38 LEU A 40 A 2 PHE A 53 ? THR A 57 ? PHE A 53 THR A 57 A 3 PHE A 13 ? GLY A 15 ? PHE A 13 GLY A 15 A 4 LYS A 79 ? GLU A 84 ? LYS A 79 GLU A 84 A 5 LYS A 74 ? LEU A 76 ? LYS A 74 LEU A 76 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 40 ? N LEU A 40 O PHE A 55 ? O PHE A 55 A 2 3 O ALA A 54 ? O ALA A 54 N ILE A 14 ? N ILE A 14 A 3 4 N GLY A 15 ? N GLY A 15 O LYS A 82 ? O LYS A 82 A 4 5 O ILE A 81 ? O ILE A 81 N LYS A 74 ? N LYS A 74 # _atom_sites.entry_id 2MKS _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O Q S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 HIS 2 2 2 HIS HIS A . n A 1 3 MET 3 3 3 MET MET A . n A 1 4 VAL 4 4 4 VAL VAL A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 ASP 7 7 7 ASP ASP A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 PHE 13 13 13 PHE PHE A . n A 1 14 ILE 14 14 14 ILE ILE A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 ASN 18 18 18 ASN ASN A . n A 1 19 THR 19 19 19 THR THR A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 THR 21 21 21 THR THR A . n A 1 22 ASN 22 22 22 ASN ASN A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 PHE 30 30 30 PHE PHE A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 TYR 33 33 33 TYR TYR A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 ARG 35 35 35 ARG ARG A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 GLU 38 38 38 GLU GLU A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 MET 42 42 42 MET MET A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 ASP 44 44 44 ASP ASP A . n A 1 45 ARG 45 45 45 ARG ARG A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 ASN 48 48 48 ASN ASN A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 ARG 51 51 51 ARG ARG A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 ALA 54 54 54 ALA ALA A . n A 1 55 PHE 55 55 55 PHE PHE A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 THR 57 57 57 THR THR A . n A 1 58 PHE 58 58 58 PHE PHE A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 ALA 62 62 62 ALA ALA A . n A 1 63 ASP 63 63 63 ASP ASP A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 ARG 69 69 69 ARG ARG A . n A 1 70 ASP 70 70 70 ASP ASP A . n A 1 71 MET 71 71 71 MET MET A . n A 1 72 ASN 72 72 72 ASN ASN A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 SER 75 75 75 SER SER A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 ASP 77 77 77 ASP ASP A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 LYS 79 79 79 LYS LYS A . n A 1 80 ALA 80 80 80 ALA ALA A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 LYS 82 82 82 LYS LYS A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 GLU 84 84 84 GLU GLU A . n A 1 85 GLN 85 85 85 GLN GLN A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 THR 87 87 87 THR THR A . n A 1 88 LYS 88 88 88 LYS LYS A . n A 1 89 PRO 89 89 89 PRO PRO A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 PHE 91 91 91 PHE PHE A . n A 1 92 GLU 92 92 92 GLU GLU A . n # loop_ _pdbx_SG_project.full_name_of_center _pdbx_SG_project.id _pdbx_SG_project.initial_of_center _pdbx_SG_project.project_name 'Joint Center for Structural Genomics' 1 JCSG PSI:Biology 'Partnership for T-Cell Biology' 2 TCELL PSI:Biology # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2014-03-12 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id entity-1 1.2 ? mM '[U-98% 13C; U-98% 15N]' 1 'sodium chloride-2' 100 ? mM ? 1 'sodium acetate-3' 10 ? mM '[U-99% 2H]' 1 'sodium azide-4' 5 ? mM ? 1 DTT-5 2 ? mM ? 1 # _pdbx_nmr_constraints.disulfide_bond_constraints_total_count ? _pdbx_nmr_constraints.entry_id 2MKS _pdbx_nmr_constraints.hydrogen_bond_constraints_total_count ? _pdbx_nmr_constraints.NA_alpha-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_beta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_chi-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_delta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_epsilon-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_gamma-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_other-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_sugar_pucker_constraints_total_count ? _pdbx_nmr_constraints.NOE_constraints_total 1343 _pdbx_nmr_constraints.NOE_interentity_total_count ? _pdbx_nmr_constraints.NOE_interproton_distance_evaluation ? _pdbx_nmr_constraints.NOE_intraresidue_total_count 347 _pdbx_nmr_constraints.NOE_long_range_total_count 383 _pdbx_nmr_constraints.NOE_medium_range_total_count 208 _pdbx_nmr_constraints.NOE_motional_averaging_correction ? _pdbx_nmr_constraints.NOE_pseudoatom_corrections ? _pdbx_nmr_constraints.NOE_sequential_total_count 405 _pdbx_nmr_constraints.protein_chi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_other_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_phi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_psi_angle_constraints_total_count ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 3 CA A VAL 56 ? ? CB A VAL 56 ? ? CG2 A VAL 56 ? ? 124.50 110.90 13.60 1.50 N 2 5 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH2 A ARG 8 ? ? 117.26 120.30 -3.04 0.50 N 3 13 CA A VAL 56 ? ? CB A VAL 56 ? ? CG2 A VAL 56 ? ? 122.29 110.90 11.39 1.50 N 4 16 CA A VAL 56 ? ? CB A VAL 56 ? ? CG2 A VAL 56 ? ? 120.44 110.90 9.54 1.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 8 ? ? -157.02 82.89 2 1 ASN A 18 ? ? -66.18 -179.40 3 1 ARG A 35 ? ? 65.15 141.30 4 1 GLU A 38 ? ? -164.21 115.94 5 1 THR A 47 ? ? -153.98 31.84 6 1 ASP A 70 ? ? -129.66 -56.67 7 2 PRO A 9 ? ? -74.88 23.92 8 2 LYS A 32 ? ? -146.31 11.17 9 2 GLU A 46 ? ? -75.44 -72.77 10 2 THR A 47 ? ? -156.62 64.38 11 2 ASN A 48 ? ? 60.85 -6.45 12 3 GLU A 20 ? ? -145.62 23.32 13 3 GLU A 46 ? ? -166.64 -68.04 14 3 THR A 47 ? ? -147.80 24.37 15 3 ASN A 48 ? ? 51.94 16.81 16 3 SER A 90 ? ? -152.29 49.22 17 4 ARG A 8 ? ? -152.64 69.64 18 4 TYR A 33 ? ? -106.66 73.29 19 4 THR A 47 ? ? -156.98 31.06 20 4 ASP A 70 ? ? -100.39 -61.04 21 4 ASP A 77 ? ? 65.21 -4.02 22 5 THR A 47 ? ? -150.90 30.04 23 5 ASN A 48 ? ? 57.88 10.26 24 5 ASP A 70 ? ? -136.68 -69.47 25 5 LYS A 79 ? ? -119.73 -167.83 26 6 VAL A 4 ? ? -157.99 18.99 27 6 GLU A 5 ? ? -74.76 35.65 28 6 GLU A 20 ? ? -140.14 22.05 29 6 ARG A 35 ? ? 64.16 176.57 30 6 GLU A 46 ? ? -60.25 -77.27 31 6 THR A 47 ? ? -162.48 37.87 32 6 ASN A 48 ? ? 58.89 13.40 33 6 ASP A 70 ? ? -133.47 -51.84 34 6 LEU A 76 ? ? -90.45 -154.75 35 7 ALA A 6 ? ? -144.37 32.78 36 7 GLU A 46 ? ? -65.99 -72.54 37 7 THR A 47 ? ? -148.30 46.71 38 8 HIS A 2 ? ? -134.19 -33.15 39 8 GLU A 5 ? ? -115.66 78.13 40 8 LEU A 12 ? ? -124.43 -166.75 41 8 GLU A 20 ? ? -149.04 34.17 42 8 VAL A 37 ? ? -142.81 -0.11 43 8 THR A 47 ? ? -164.73 53.24 44 8 ASN A 48 ? ? 59.29 15.74 45 8 LYS A 49 ? ? -67.95 -176.52 46 8 ASP A 70 ? ? -108.04 -85.33 47 9 VAL A 4 ? ? -70.89 37.31 48 9 ARG A 35 ? ? 75.33 108.93 49 9 THR A 47 ? ? -164.28 27.25 50 9 ASP A 70 ? ? -114.85 -70.36 51 9 ASN A 72 ? ? -66.66 53.88 52 9 ASP A 77 ? ? 59.33 15.74 53 10 ALA A 6 ? ? -101.16 70.96 54 10 LYS A 32 ? ? -140.66 -5.98 55 10 VAL A 37 ? ? -142.95 -1.41 56 10 THR A 47 ? ? -163.45 44.83 57 10 ASN A 48 ? ? 50.94 19.36 58 10 LEU A 76 ? ? -162.29 98.42 59 10 ALA A 86 ? ? -62.98 91.56 60 11 VAL A 4 ? ? -147.39 31.32 61 11 ARG A 35 ? ? 69.25 148.83 62 11 THR A 47 ? ? -166.01 46.69 63 11 THR A 87 ? ? -176.59 -178.80 64 11 PRO A 89 ? ? -70.56 -164.77 65 12 ASP A 7 ? ? -152.00 55.38 66 12 ARG A 8 ? ? -151.07 80.50 67 12 PRO A 9 ? ? -67.56 91.74 68 12 GLU A 20 ? ? -149.65 17.98 69 12 LYS A 32 ? ? -69.45 12.50 70 12 ARG A 35 ? ? 60.28 178.18 71 12 THR A 47 ? ? -169.66 35.75 72 12 ASN A 48 ? ? 54.84 18.32 73 12 ALA A 64 ? ? -69.16 4.42 74 12 ASP A 77 ? ? 68.40 -3.30 75 13 VAL A 4 ? ? -156.96 20.34 76 13 ASP A 7 ? ? -105.78 47.11 77 13 ARG A 8 ? ? -152.70 70.79 78 13 LYS A 32 ? ? -67.45 22.11 79 13 ARG A 35 ? ? -160.10 118.11 80 13 ASP A 44 ? ? -69.39 -179.11 81 13 THR A 47 ? ? -164.89 61.77 82 13 ASN A 48 ? ? 57.72 11.89 83 13 ARG A 69 ? ? -74.52 -70.82 84 13 MET A 71 ? ? -68.45 79.99 85 13 ALA A 86 ? ? -70.93 37.60 86 14 HIS A 2 ? ? 55.38 89.25 87 14 ARG A 8 ? ? 61.47 165.34 88 14 GLU A 20 ? ? -146.35 28.10 89 14 ARG A 35 ? ? 62.43 156.51 90 14 GLU A 46 ? ? -63.36 -70.28 91 14 THR A 47 ? ? -154.58 48.38 92 14 ASN A 48 ? ? 55.95 8.15 93 14 MET A 71 ? ? -104.38 -153.81 94 14 ASN A 72 ? ? 57.23 78.38 95 14 LEU A 76 ? ? -119.48 -154.29 96 14 THR A 87 ? ? -123.52 -164.76 97 15 GLU A 20 ? ? -142.06 28.07 98 15 VAL A 37 ? ? -140.76 -5.23 99 15 THR A 47 ? ? -160.59 34.07 100 15 ALA A 86 ? ? -56.08 92.35 101 16 HIS A 2 ? ? 57.95 -172.36 102 16 VAL A 37 ? ? -140.76 -1.41 103 16 THR A 47 ? ? -168.44 43.66 104 17 ARG A 8 ? ? -116.55 71.04 105 17 LYS A 32 ? ? -62.88 1.22 106 17 GLU A 46 ? ? -75.08 -76.41 107 17 THR A 47 ? ? -142.12 42.66 108 17 ASN A 48 ? ? 59.96 18.70 109 17 ASP A 70 ? ? -133.02 -50.62 110 18 ARG A 8 ? ? 178.07 157.20 111 18 PRO A 9 ? ? -78.15 37.72 112 18 ASN A 18 ? ? -51.37 175.87 113 18 VAL A 29 ? ? -64.33 -76.09 114 18 LYS A 32 ? ? -68.07 1.39 115 18 ARG A 35 ? ? 62.08 166.78 116 18 THR A 47 ? ? -153.00 47.97 117 18 ASN A 48 ? ? 54.12 6.59 118 18 LEU A 76 ? ? -148.24 14.60 119 18 ASP A 77 ? ? 179.28 -18.31 120 19 GLU A 46 ? ? -70.88 -81.98 121 19 SER A 90 ? ? -68.17 83.80 122 20 HIS A 2 ? ? -140.64 57.10 123 20 VAL A 4 ? ? -143.20 48.19 124 20 ASP A 7 ? ? -165.23 68.04 125 20 PRO A 9 ? ? -71.91 39.66 126 20 THR A 47 ? ? -156.55 33.84 127 20 ASN A 48 ? ? 59.32 14.98 128 20 MET A 71 ? ? -86.80 -153.30 129 20 ASN A 72 ? ? 65.43 164.08 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 4 ALA A 6 ? ? ASP A 7 ? ? 145.98 2 4 ARG A 45 ? ? GLU A 46 ? ? -134.52 3 6 GLY A 1 ? ? HIS A 2 ? ? 133.20 4 6 ALA A 6 ? ? ASP A 7 ? ? 146.83 5 6 SER A 90 ? ? PHE A 91 ? ? 148.63 6 18 ASP A 7 ? ? ARG A 8 ? ? 147.93 7 18 LEU A 76 ? ? ASP A 77 ? ? -144.98 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 TYR A 33 ? ? 0.076 'SIDE CHAIN' 2 2 ARG A 8 ? ? 0.090 'SIDE CHAIN' 3 5 ARG A 69 ? ? 0.130 'SIDE CHAIN' 4 6 TYR A 33 ? ? 0.076 'SIDE CHAIN' 5 6 ARG A 35 ? ? 0.202 'SIDE CHAIN' 6 8 ARG A 51 ? ? 0.087 'SIDE CHAIN' 7 9 ARG A 69 ? ? 0.116 'SIDE CHAIN' 8 10 TYR A 33 ? ? 0.069 'SIDE CHAIN' 9 10 ARG A 35 ? ? 0.086 'SIDE CHAIN' 10 10 ARG A 69 ? ? 0.097 'SIDE CHAIN' 11 13 ARG A 45 ? ? 0.089 'SIDE CHAIN' 12 14 ARG A 8 ? ? 0.082 'SIDE CHAIN' 13 16 ARG A 8 ? ? 0.123 'SIDE CHAIN' 14 16 ARG A 35 ? ? 0.128 'SIDE CHAIN' 15 17 ARG A 8 ? ? 0.115 'SIDE CHAIN' #