HEADER ANTIMICROBIAL PROTEIN 05-MAR-14 2MLU TITLE STRUCTURE OF THE ANTIMICROBIAL PEPTIDE LSBB IN DPC MICELLES COMPND MOL_ID: 1; COMPND 2 MOLECULE: LSBB; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: LACTOCOCCUS LACTIS SUBSP. LACTIS; SOURCE 4 ORGANISM_TAXID: 1360 KEYWDS BACTERIOCIN, ANTIMICROBIAL PEPTIDE, RECEPTOR BINDING DOMAIN, MODE OF KEYWDS 2 KILLING, DPC, ANTIMICROBIAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR P.KRISTIANSEN,K.OVCHINNIKOV,D.DIEP REVDAT 4 14-JUN-23 2MLU 1 REMARK REVDAT 3 10-SEP-14 2MLU 1 JRNL REVDAT 2 23-JUL-14 2MLU 1 JRNL REVDAT 1 16-JUL-14 2MLU 0 JRNL AUTH K.V.OVCHINNIKOV,P.E.KRISTIANSEN,G.UZELAC,L.TOPISIROVIC, JRNL AUTH 2 M.KOJIC,J.NISSEN-MEYER,I.F.NES,D.B.DIEP JRNL TITL DEFINING THE STRUCTURE AND RECEPTOR BINDING DOMAIN OF THE JRNL TITL 2 LEADERLESS BACTERIOCIN LSBB. JRNL REF J.BIOL.CHEM. V. 289 23838 2014 JRNL REFN ISSN 0021-9258 JRNL PMID 24993828 JRNL DOI 10.1074/JBC.M114.579698 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA, CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 GUNTERT, MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MLU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-MAR-14. REMARK 100 THE DEPOSITION ID IS D_1000103768. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.0 MM LSBB, 0.2 MM DSS, 200 MM REMARK 210 [U-99% 2H] DPC, 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D DQF-COSY; 2D REMARK 210 1H-1H TOCSY; 2D 1H-13C HSQC; 2D REMARK 210 1H-1H NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY, TOPSPIN 2.4, CARA, TALOS REMARK 210 + REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 17 -73.18 -59.82 REMARK 500 1 THR A 20 91.40 -161.41 REMARK 500 2 LYS A 17 -74.74 -61.53 REMARK 500 3 LYS A 2 104.98 -54.97 REMARK 500 3 LYS A 19 139.42 -179.28 REMARK 500 3 ARG A 27 -35.24 -178.14 REMARK 500 4 THR A 20 146.18 -171.73 REMARK 500 6 LYS A 2 105.18 -58.58 REMARK 500 8 LYS A 18 77.97 62.60 REMARK 500 8 THR A 20 86.04 -152.57 REMARK 500 10 LYS A 17 -74.12 -64.55 REMARK 500 10 THR A 20 41.35 -95.12 REMARK 500 12 LYS A 17 -72.33 -60.10 REMARK 500 12 LYS A 29 -73.24 -80.97 REMARK 500 13 THR A 20 134.83 -171.16 REMARK 500 14 THR A 20 69.44 -116.42 REMARK 500 15 LYS A 2 104.09 -56.90 REMARK 500 15 LYS A 29 -72.67 -86.19 REMARK 500 16 LYS A 17 -72.47 -77.75 REMARK 500 16 LYS A 18 133.59 -170.27 REMARK 500 16 ARG A 27 -75.19 -51.67 REMARK 500 17 LYS A 19 139.65 -179.32 REMARK 500 18 LYS A 18 91.04 61.69 REMARK 500 20 LYS A 29 -72.85 -71.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 19832 RELATED DB: BMRB REMARK 900 RELATED ID: 2MLV RELATED DB: PDB DBREF 2MLU A 1 30 UNP Q7X2B5 Q7X2B5_LACLL 1 30 SEQRES 1 A 30 MET LYS THR ILE LEU ARG PHE VAL ALA GLY TYR ASP ILE SEQRES 2 A 30 ALA SER HIS LYS LYS LYS THR GLY GLY TYR PRO TRP GLU SEQRES 3 A 30 ARG GLY LYS ALA HELIX 1 1 THR A 3 LYS A 18 1 16 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1