data_2MMF
# 
_entry.id   2MMF 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.391 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   2MMF         pdb_00002mmf 10.2210/pdb2mmf/pdb 
RCSB  RCSB103788   ?            ?                   
BMRB  19853        ?            10.13018/BMR19853   
WWPDB D_1000103788 ?            ?                   
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 2015-02-25 
2 'Structure model' 1 1 2015-12-23 
3 'Structure model' 1 2 2024-05-01 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Database references'  
2 3 'Structure model' 'Data collection'      
3 3 'Structure model' 'Database references'  
4 3 'Structure model' 'Derived calculations' 
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 3 'Structure model' chem_comp_atom        
2 3 'Structure model' chem_comp_bond        
3 3 'Structure model' database_2            
4 3 'Structure model' pdbx_nmr_software     
5 3 'Structure model' pdbx_nmr_spectrometer 
6 3 'Structure model' struct_conn           
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1  3 'Structure model' '_database_2.pdbx_DOI'                
2  3 'Structure model' '_database_2.pdbx_database_accession' 
3  3 'Structure model' '_pdbx_nmr_software.name'             
4  3 'Structure model' '_pdbx_nmr_spectrometer.model'        
5  3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 
6  3 'Structure model' '_struct_conn.ptnr1_auth_comp_id'     
7  3 'Structure model' '_struct_conn.ptnr1_auth_seq_id'      
8  3 'Structure model' '_struct_conn.ptnr1_label_atom_id'    
9  3 'Structure model' '_struct_conn.ptnr1_label_comp_id'    
10 3 'Structure model' '_struct_conn.ptnr1_label_seq_id'     
11 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id'     
12 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id'      
13 3 'Structure model' '_struct_conn.ptnr2_label_atom_id'    
14 3 'Structure model' '_struct_conn.ptnr2_label_comp_id'    
15 3 'Structure model' '_struct_conn.ptnr2_label_seq_id'     
# 
_pdbx_database_status.deposit_site                    BMRB 
_pdbx_database_status.entry_id                        2MMF 
_pdbx_database_status.process_site                    RCSB 
_pdbx_database_status.recvd_initial_deposition_date   2014-03-14 
_pdbx_database_status.SG_entry                        ? 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.status_code_mr                  REL 
_pdbx_database_status.status_code_sf                  ? 
_pdbx_database_status.status_code_cs                  REL 
_pdbx_database_status.methods_development_category    ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_nmr_data            ? 
# 
_pdbx_database_related.db_id          19853 
_pdbx_database_related.db_name        BMRB 
_pdbx_database_related.content_type   unspecified 
_pdbx_database_related.details        . 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Li, L.'    1 
'Stone, M.' 2 
# 
_citation.id                        primary 
_citation.title                     
;DNA Sequence Modulates Geometrical Isomerism of the trans-8,9-Dihydro-8-(2,6-diamino-4-oxo-3,4-dihydropyrimid-5-yl-formamido)-9-hydroxy Aflatoxin B1 Adduct.
;
_citation.journal_abbrev            Chem.Res.Toxicol. 
_citation.journal_volume            28 
_citation.page_first                225 
_citation.page_last                 237 
_citation.year                      2015 
_citation.journal_id_ASTM           CRTOEC 
_citation.country                   US 
_citation.journal_id_ISSN           0893-228X 
_citation.journal_id_CSD            2140 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   25587868 
_citation.pdbx_database_id_DOI      10.1021/tx5003832 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Li, L.'      1 ? 
primary 'Brown, K.L.' 2 ? 
primary 'Ma, R.'      3 ? 
primary 'Stone, M.P.' 4 ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer syn "DNA_(5'-D(*CP*TP*AP*AP*(FAG)P*AP*TP*TP*CP*A)-3')" 3374.306 1 ? ? ? ? 
2 polymer syn "DNA_(5'-D(*TP*GP*AP*AP*TP*CP*TP*TP*AP*G)-3')"     3059.028 1 ? ? ? ? 
# 
loop_
_entity_poly.entity_id 
_entity_poly.type 
_entity_poly.nstd_linkage 
_entity_poly.nstd_monomer 
_entity_poly.pdbx_seq_one_letter_code 
_entity_poly.pdbx_seq_one_letter_code_can 
_entity_poly.pdbx_strand_id 
_entity_poly.pdbx_target_identifier 
1 polydeoxyribonucleotide no yes '(DC)(DT)(DA)(DA)(FAG)(DA)(DT)(DT)(DC)(DA)' CTAANATTCA A ? 
2 polydeoxyribonucleotide no no  '(DT)(DG)(DA)(DA)(DT)(DC)(DT)(DT)(DA)(DG)'  TGAATCTTAG B ? 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  DC  n 
1 2  DT  n 
1 3  DA  n 
1 4  DA  n 
1 5  FAG n 
1 6  DA  n 
1 7  DT  n 
1 8  DT  n 
1 9  DC  n 
1 10 DA  n 
2 1  DT  n 
2 2  DG  n 
2 3  DA  n 
2 4  DA  n 
2 5  DT  n 
2 6  DC  n 
2 7  DT  n 
2 8  DT  n 
2 9  DA  n 
2 10 DG  n 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
DA  'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P'  331.222 
DC  'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P'   307.197 
DG  'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P'  347.221 
DT  'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P'  322.208 
FAG 'DNA linking' . 
;[1',2'-DIDEOXY[2-AMINO-5-([9-HYDROXY-AFLATOXINB2-8-YL]-FORMYL-AMINO)-6-OXO-1,6-IHYDRO-PYRIMIDIN-4-YLAMINO]-RIBOFURANOSE]-5-MONOPHOSPHATE GROUP
;
? 'C27 H28 N5 O15 P' 693.509 
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  DC  1  1  1  DC  DC  A . n 
A 1 2  DT  2  2  2  DT  DT  A . n 
A 1 3  DA  3  3  3  DA  DA  A . n 
A 1 4  DA  4  4  4  DA  DA  A . n 
A 1 5  FAG 5  5  5  FAG FAG A . n 
A 1 6  DA  6  6  6  DA  DA  A . n 
A 1 7  DT  7  7  7  DT  DT  A . n 
A 1 8  DT  8  8  8  DT  DT  A . n 
A 1 9  DC  9  9  9  DC  DC  A . n 
A 1 10 DA  10 10 10 DA  DA  A . n 
B 2 1  DT  1  11 11 DT  DT  B . n 
B 2 2  DG  2  12 12 DG  DG  B . n 
B 2 3  DA  3  13 13 DA  DA  B . n 
B 2 4  DA  4  14 14 DA  DA  B . n 
B 2 5  DT  5  15 15 DT  DT  B . n 
B 2 6  DC  6  16 16 DC  DC  B . n 
B 2 7  DT  7  17 17 DT  DT  B . n 
B 2 8  DT  8  18 18 DT  DT  B . n 
B 2 9  DA  9  19 19 DA  DA  B . n 
B 2 10 DG  10 20 20 DG  DG  B . n 
# 
_exptl.absorpt_coefficient_mu     ? 
_exptl.absorpt_correction_T_max   ? 
_exptl.absorpt_correction_T_min   ? 
_exptl.absorpt_correction_type    ? 
_exptl.absorpt_process_details    ? 
_exptl.crystals_number            ? 
_exptl.details                    ? 
_exptl.entry_id                   2MMF 
_exptl.method                     'SOLUTION NMR' 
_exptl.method_details             ? 
# 
_struct.entry_id                  2MMF 
_struct.title                     'Solution structure of AGA modified' 
_struct.pdbx_model_details        'closest to the average, model1' 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        2MMF 
_struct_keywords.pdbx_keywords   DNA 
_struct_keywords.text            
'Aflatoxin B1, FAPY, FORMAMIDOPYRIMIDINE, INTERCALATION, DNA DUPLEX, DNA ADDUCT, SEQUENCE DEPENDENCE, DNA' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 2 ? 
# 
loop_
_struct_ref.id 
_struct_ref.db_name 
_struct_ref.db_code 
_struct_ref.pdbx_db_accession 
_struct_ref.entity_id 
_struct_ref.pdbx_align_begin 
_struct_ref.pdbx_seq_one_letter_code 
_struct_ref.pdbx_db_isoform 
1 PDB 2MMF 2MMF 1 ? CTAANATTCA ? 
2 PDB 2MMF 2MMF 2 ? TGAATCTTAG ? 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 2MMF A 1 ? 10 ? 2MMF 1  ? 10 ? 1  10 
2 2 2MMF B 1 ? 10 ? 2MMF 11 ? 20 ? 11 20 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_defined_assembly 
_pdbx_struct_assembly.method_details       ? 
_pdbx_struct_assembly.oligomeric_details   dimeric 
_pdbx_struct_assembly.oligomeric_count     2 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1 
_pdbx_struct_assembly_gen.asym_id_list      A,B 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
_struct_biol.id        1 
_struct_biol.details   ? 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
covale1  covale both ? A DA  4  "O3'" ? ? ? 1_555 A FAG 5  P  ? ? A DA  4  A FAG 5  1_555 ? ? ? ? ? ? ?            1.615 ? ? 
covale2  covale one  ? A FAG 5  "O3'" ? ? ? 1_555 A DA  6  P  ? ? A FAG 5  A DA  6  1_555 ? ? ? ? ? ? ?            1.614 ? ? 
hydrog1  hydrog ?    ? A DC  1  N3    ? ? ? 1_555 B DG  10 N1 ? ? A DC  1  B DG  20 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog2  hydrog ?    ? A DC  1  N4    ? ? ? 1_555 B DG  10 O6 ? ? A DC  1  B DG  20 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog3  hydrog ?    ? A DC  1  O2    ? ? ? 1_555 B DG  10 N2 ? ? A DC  1  B DG  20 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog4  hydrog ?    ? A DT  2  N3    ? ? ? 1_555 B DA  9  N1 ? ? A DT  2  B DA  19 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog5  hydrog ?    ? A DT  2  O4    ? ? ? 1_555 B DA  9  N6 ? ? A DT  2  B DA  19 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog6  hydrog ?    ? A DA  3  N1    ? ? ? 1_555 B DT  8  N3 ? ? A DA  3  B DT  18 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog7  hydrog ?    ? A DA  3  N6    ? ? ? 1_555 B DT  8  O4 ? ? A DA  3  B DT  18 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog8  hydrog ?    ? A DA  4  N1    ? ? ? 1_555 B DT  7  N3 ? ? A DA  4  B DT  17 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog9  hydrog ?    ? A DA  4  N6    ? ? ? 1_555 B DT  7  O4 ? ? A DA  4  B DT  17 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog10 hydrog ?    ? A DA  6  N1    ? ? ? 1_555 B DT  5  N3 ? ? A DA  6  B DT  15 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog11 hydrog ?    ? A DA  6  N6    ? ? ? 1_555 B DT  5  O4 ? ? A DA  6  B DT  15 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog12 hydrog ?    ? A DT  7  N3    ? ? ? 1_555 B DA  4  N1 ? ? A DT  7  B DA  14 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog13 hydrog ?    ? A DT  7  O4    ? ? ? 1_555 B DA  4  N6 ? ? A DT  7  B DA  14 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog14 hydrog ?    ? A DT  8  N3    ? ? ? 1_555 B DA  3  N1 ? ? A DT  8  B DA  13 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog15 hydrog ?    ? A DT  8  O4    ? ? ? 1_555 B DA  3  N6 ? ? A DT  8  B DA  13 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog16 hydrog ?    ? A DC  9  N3    ? ? ? 1_555 B DG  2  N1 ? ? A DC  9  B DG  12 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog17 hydrog ?    ? A DC  9  N4    ? ? ? 1_555 B DG  2  O6 ? ? A DC  9  B DG  12 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog18 hydrog ?    ? A DC  9  O2    ? ? ? 1_555 B DG  2  N2 ? ? A DC  9  B DG  12 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog19 hydrog ?    ? A DA  10 N1    ? ? ? 1_555 B DT  1  N3 ? ? A DA  10 B DT  11 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog20 hydrog ?    ? A DA  10 N6    ? ? ? 1_555 B DT  1  O4 ? ? A DA  10 B DT  11 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
# 
loop_
_struct_conn_type.id 
_struct_conn_type.criteria 
_struct_conn_type.reference 
covale ? ? 
hydrog ? ? 
# 
_pdbx_validate_rmsd_bond.id                        1 
_pdbx_validate_rmsd_bond.PDB_model_num             1 
_pdbx_validate_rmsd_bond.auth_atom_id_1            "C5'" 
_pdbx_validate_rmsd_bond.auth_asym_id_1            A 
_pdbx_validate_rmsd_bond.auth_comp_id_1            DA 
_pdbx_validate_rmsd_bond.auth_seq_id_1             3 
_pdbx_validate_rmsd_bond.PDB_ins_code_1            ? 
_pdbx_validate_rmsd_bond.label_alt_id_1            ? 
_pdbx_validate_rmsd_bond.auth_atom_id_2            "C4'" 
_pdbx_validate_rmsd_bond.auth_asym_id_2            A 
_pdbx_validate_rmsd_bond.auth_comp_id_2            DA 
_pdbx_validate_rmsd_bond.auth_seq_id_2             3 
_pdbx_validate_rmsd_bond.PDB_ins_code_2            ? 
_pdbx_validate_rmsd_bond.label_alt_id_2            ? 
_pdbx_validate_rmsd_bond.bond_value                1.557 
_pdbx_validate_rmsd_bond.bond_target_value         1.512 
_pdbx_validate_rmsd_bond.bond_deviation            0.045 
_pdbx_validate_rmsd_bond.bond_standard_deviation   0.007 
_pdbx_validate_rmsd_bond.linker_flag               N 
# 
loop_
_pdbx_validate_rmsd_angle.id 
_pdbx_validate_rmsd_angle.PDB_model_num 
_pdbx_validate_rmsd_angle.auth_atom_id_1 
_pdbx_validate_rmsd_angle.auth_asym_id_1 
_pdbx_validate_rmsd_angle.auth_comp_id_1 
_pdbx_validate_rmsd_angle.auth_seq_id_1 
_pdbx_validate_rmsd_angle.PDB_ins_code_1 
_pdbx_validate_rmsd_angle.label_alt_id_1 
_pdbx_validate_rmsd_angle.auth_atom_id_2 
_pdbx_validate_rmsd_angle.auth_asym_id_2 
_pdbx_validate_rmsd_angle.auth_comp_id_2 
_pdbx_validate_rmsd_angle.auth_seq_id_2 
_pdbx_validate_rmsd_angle.PDB_ins_code_2 
_pdbx_validate_rmsd_angle.label_alt_id_2 
_pdbx_validate_rmsd_angle.auth_atom_id_3 
_pdbx_validate_rmsd_angle.auth_asym_id_3 
_pdbx_validate_rmsd_angle.auth_comp_id_3 
_pdbx_validate_rmsd_angle.auth_seq_id_3 
_pdbx_validate_rmsd_angle.PDB_ins_code_3 
_pdbx_validate_rmsd_angle.label_alt_id_3 
_pdbx_validate_rmsd_angle.angle_value 
_pdbx_validate_rmsd_angle.angle_target_value 
_pdbx_validate_rmsd_angle.angle_deviation 
_pdbx_validate_rmsd_angle.angle_standard_deviation 
_pdbx_validate_rmsd_angle.linker_flag 
1  1 "O4'" A DC 1  ? ? "C1'" A DC 1  ? ? N1    A DC 1  ? ? 111.03 108.30 2.73  0.30 N 
2  1 N1    A DC 1  ? ? C2    A DC 1  ? ? O2    A DC 1  ? ? 122.92 118.90 4.02  0.60 N 
3  1 N3    A DC 1  ? ? C2    A DC 1  ? ? O2    A DC 1  ? ? 116.54 121.90 -5.36 0.70 N 
4  1 N3    A DT 2  ? ? C2    A DT 2  ? ? O2    A DT 2  ? ? 118.65 122.30 -3.65 0.60 N 
5  1 C6    A DT 2  ? ? C5    A DT 2  ? ? C7    A DT 2  ? ? 119.20 122.90 -3.70 0.60 N 
6  1 C4    A DA 3  ? ? C5    A DA 3  ? ? C6    A DA 3  ? ? 113.61 117.00 -3.39 0.50 N 
7  1 C5    A DA 4  ? ? C6    A DA 4  ? ? N1    A DA 4  ? ? 120.85 117.70 3.15  0.50 N 
8  1 N1    A DA 4  ? ? C6    A DA 4  ? ? N6    A DA 4  ? ? 113.68 118.60 -4.92 0.60 N 
9  1 "O4'" A DA 6  ? ? "C1'" A DA 6  ? ? N9    A DA 6  ? ? 110.74 108.30 2.44  0.30 N 
10 1 C4    A DA 6  ? ? C5    A DA 6  ? ? C6    A DA 6  ? ? 113.33 117.00 -3.67 0.50 N 
11 1 C5    A DA 6  ? ? C6    A DA 6  ? ? N1    A DA 6  ? ? 121.76 117.70 4.06  0.50 N 
12 1 N1    A DA 6  ? ? C6    A DA 6  ? ? N6    A DA 6  ? ? 114.26 118.60 -4.34 0.60 N 
13 1 C4    A DT 7  ? ? C5    A DT 7  ? ? C6    A DT 7  ? ? 121.82 118.00 3.82  0.60 N 
14 1 N3    A DT 7  ? ? C2    A DT 7  ? ? O2    A DT 7  ? ? 118.62 122.30 -3.68 0.60 N 
15 1 C6    A DT 7  ? ? C5    A DT 7  ? ? C7    A DT 7  ? ? 118.53 122.90 -4.37 0.60 N 
16 1 "O4'" A DC 9  ? ? "C4'" A DC 9  ? ? "C3'" A DC 9  ? ? 109.77 106.00 3.77  0.60 N 
17 1 N1    A DC 9  ? ? C2    A DC 9  ? ? O2    A DC 9  ? ? 123.43 118.90 4.53  0.60 N 
18 1 N3    A DC 9  ? ? C2    A DC 9  ? ? O2    A DC 9  ? ? 116.04 121.90 -5.86 0.70 N 
19 1 "O4'" A DA 10 ? ? "C1'" A DA 10 ? ? N9    A DA 10 ? ? 111.34 108.30 3.04  0.30 N 
20 1 C4    A DA 10 ? ? C5    A DA 10 ? ? C6    A DA 10 ? ? 113.89 117.00 -3.11 0.50 N 
21 1 C5    A DA 10 ? ? C6    A DA 10 ? ? N1    A DA 10 ? ? 121.82 117.70 4.12  0.50 N 
22 1 N1    A DA 10 ? ? C6    A DA 10 ? ? N6    A DA 10 ? ? 112.03 118.60 -6.57 0.60 N 
23 1 "O4'" B DT 11 ? ? "C1'" B DT 11 ? ? N1    B DT 11 ? ? 110.35 108.30 2.05  0.30 N 
24 1 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9    B DG 12 ? ? 113.09 108.30 4.79  0.30 N 
25 1 N1    B DG 12 ? ? C6    B DG 12 ? ? O6    B DG 12 ? ? 115.83 119.90 -4.07 0.60 N 
26 1 C4    B DA 13 ? ? C5    B DA 13 ? ? C6    B DA 13 ? ? 113.10 117.00 -3.90 0.50 N 
27 1 C5    B DA 13 ? ? C6    B DA 13 ? ? N1    B DA 13 ? ? 121.24 117.70 3.54  0.50 N 
28 1 N1    B DA 13 ? ? C6    B DA 13 ? ? N6    B DA 13 ? ? 112.78 118.60 -5.82 0.60 N 
29 1 C4    B DA 14 ? ? C5    B DA 14 ? ? C6    B DA 14 ? ? 113.84 117.00 -3.16 0.50 N 
30 1 N1    B DA 14 ? ? C6    B DA 14 ? ? N6    B DA 14 ? ? 114.16 118.60 -4.44 0.60 N 
31 1 "O4'" B DT 15 ? ? "C1'" B DT 15 ? ? N1    B DT 15 ? ? 113.49 108.30 5.19  0.30 N 
32 1 "O4'" B DT 17 ? ? "C1'" B DT 17 ? ? N1    B DT 17 ? ? 112.83 108.30 4.53  0.30 N 
33 1 C4    B DT 17 ? ? C5    B DT 17 ? ? C6    B DT 17 ? ? 121.90 118.00 3.90  0.60 N 
34 1 C5    B DT 17 ? ? C6    B DT 17 ? ? N1    B DT 17 ? ? 119.69 123.70 -4.01 0.60 N 
35 1 "O4'" B DT 18 ? ? "C1'" B DT 18 ? ? N1    B DT 18 ? ? 115.12 108.30 6.82  0.30 N 
36 1 C5    B DA 19 ? ? C6    B DA 19 ? ? N1    B DA 19 ? ? 121.38 117.70 3.68  0.50 N 
37 1 N1    B DA 19 ? ? C6    B DA 19 ? ? N6    B DA 19 ? ? 113.57 118.60 -5.03 0.60 N 
38 1 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9    B DG 20 ? ? 111.45 108.30 3.15  0.30 N 
# 
_pdbx_nmr_ensemble.average_constraint_violations_per_residue     ? 
_pdbx_nmr_ensemble.average_constraints_per_residue               ? 
_pdbx_nmr_ensemble.average_distance_constraint_violation         ? 
_pdbx_nmr_ensemble.average_torsion_angle_constraint_violation    ? 
_pdbx_nmr_ensemble.conformer_selection_criteria                  'back calculated data agree with experimental NOESY spectrum' 
_pdbx_nmr_ensemble.conformers_calculated_total_number            10 
_pdbx_nmr_ensemble.conformers_submitted_total_number             1 
_pdbx_nmr_ensemble.distance_constraint_violation_method          ? 
_pdbx_nmr_ensemble.entry_id                                      2MMF 
_pdbx_nmr_ensemble.maximum_distance_constraint_violation         ? 
_pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation   ? 
_pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation    ? 
_pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation   ? 
_pdbx_nmr_ensemble.torsion_angle_constraint_violation_method     ? 
# 
_pdbx_nmr_representative.conformer_id         1 
_pdbx_nmr_representative.entry_id             2MMF 
_pdbx_nmr_representative.selection_criteria   'closest to the average' 
# 
_pdbx_nmr_sample_details.contents         
;0.5 mM DNA (5'-D(*CP*TP*AP*AP*(FAG)P*AP*TP*TP*CP*A)-3'), 0.5 mM DNA (5'-D(*TP*GP*AP*AP*TP*CP*TP*TP*AP*G)-3'), 100% D2O
;
_pdbx_nmr_sample_details.solution_id      1 
_pdbx_nmr_sample_details.solvent_system   '100% D2O' 
# 
loop_
_pdbx_nmr_exptl_sample.component 
_pdbx_nmr_exptl_sample.concentration 
_pdbx_nmr_exptl_sample.concentration_range 
_pdbx_nmr_exptl_sample.concentration_units 
_pdbx_nmr_exptl_sample.isotopic_labeling 
_pdbx_nmr_exptl_sample.solution_id 
;DNA (5'-D(*CP*TP*AP*AP*(FAG)P*AP*TP*TP*CP*A)-3')-1
;
0.5 ? mM ? 1 
;DNA (5'-D(*TP*GP*AP*AP*TP*CP*TP*TP*AP*G)-3')-2
;
0.5 ? mM ? 1 
# 
_pdbx_nmr_exptl_sample_conditions.conditions_id       1 
_pdbx_nmr_exptl_sample_conditions.ionic_strength      0.1 
_pdbx_nmr_exptl_sample_conditions.pH                  7 
_pdbx_nmr_exptl_sample_conditions.pressure            ambient 
_pdbx_nmr_exptl_sample_conditions.pressure_units      ? 
_pdbx_nmr_exptl_sample_conditions.temperature         283 
_pdbx_nmr_exptl_sample_conditions.temperature_units   K 
# 
loop_
_pdbx_nmr_exptl.conditions_id 
_pdbx_nmr_exptl.experiment_id 
_pdbx_nmr_exptl.solution_id 
_pdbx_nmr_exptl.type 
1 1 1 '2D 1H-1H COSY'  
1 2 1 '2D 1H-1H NOESY' 
# 
_pdbx_nmr_constraints.disulfide_bond_constraints_total_count        ? 
_pdbx_nmr_constraints.entry_id                                      2MMF 
_pdbx_nmr_constraints.hydrogen_bond_constraints_total_count         ? 
_pdbx_nmr_constraints.NA_alpha-angle_constraints_total_count        ? 
_pdbx_nmr_constraints.NA_beta-angle_constraints_total_count         ? 
_pdbx_nmr_constraints.NA_chi-angle_constraints_total_count          ? 
_pdbx_nmr_constraints.NA_delta-angle_constraints_total_count        ? 
_pdbx_nmr_constraints.NA_epsilon-angle_constraints_total_count      ? 
_pdbx_nmr_constraints.NA_gamma-angle_constraints_total_count        ? 
_pdbx_nmr_constraints.NA_other-angle_constraints_total_count        ? 
_pdbx_nmr_constraints.NA_sugar_pucker_constraints_total_count       ? 
_pdbx_nmr_constraints.NOE_constraints_total                         256 
_pdbx_nmr_constraints.NOE_interentity_total_count                   ? 
_pdbx_nmr_constraints.NOE_interproton_distance_evaluation           ? 
_pdbx_nmr_constraints.NOE_intraresidue_total_count                  160 
_pdbx_nmr_constraints.NOE_long_range_total_count                    ? 
_pdbx_nmr_constraints.NOE_medium_range_total_count                  ? 
_pdbx_nmr_constraints.NOE_motional_averaging_correction             ? 
_pdbx_nmr_constraints.NOE_pseudoatom_corrections                    ? 
_pdbx_nmr_constraints.NOE_sequential_total_count                    96 
_pdbx_nmr_constraints.protein_chi_angle_constraints_total_count     ? 
_pdbx_nmr_constraints.protein_other_angle_constraints_total_count   ? 
_pdbx_nmr_constraints.protein_phi_angle_constraints_total_count     ? 
_pdbx_nmr_constraints.protein_psi_angle_constraints_total_count     ? 
# 
_pdbx_nmr_refine.entry_id           2MMF 
_pdbx_nmr_refine.method             'DGSA-distance geometry simulated annealing' 
_pdbx_nmr_refine.details            ? 
_pdbx_nmr_refine.software_ordinal   1 
# 
loop_
_pdbx_nmr_software.authors 
_pdbx_nmr_software.classification 
_pdbx_nmr_software.name 
_pdbx_nmr_software.version 
_pdbx_nmr_software.ordinal 
'Bruker Biospin'                                                            collection TopSpin ?  1 
'Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollman' refinement Amber   12 2 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
DA  OP3    O N N 1   
DA  P      P N N 2   
DA  OP1    O N N 3   
DA  OP2    O N N 4   
DA  "O5'"  O N N 5   
DA  "C5'"  C N N 6   
DA  "C4'"  C N R 7   
DA  "O4'"  O N N 8   
DA  "C3'"  C N S 9   
DA  "O3'"  O N N 10  
DA  "C2'"  C N N 11  
DA  "C1'"  C N R 12  
DA  N9     N Y N 13  
DA  C8     C Y N 14  
DA  N7     N Y N 15  
DA  C5     C Y N 16  
DA  C6     C Y N 17  
DA  N6     N N N 18  
DA  N1     N Y N 19  
DA  C2     C Y N 20  
DA  N3     N Y N 21  
DA  C4     C Y N 22  
DA  HOP3   H N N 23  
DA  HOP2   H N N 24  
DA  "H5'"  H N N 25  
DA  "H5''" H N N 26  
DA  "H4'"  H N N 27  
DA  "H3'"  H N N 28  
DA  "HO3'" H N N 29  
DA  "H2'"  H N N 30  
DA  "H2''" H N N 31  
DA  "H1'"  H N N 32  
DA  H8     H N N 33  
DA  H61    H N N 34  
DA  H62    H N N 35  
DA  H2     H N N 36  
DC  OP3    O N N 37  
DC  P      P N N 38  
DC  OP1    O N N 39  
DC  OP2    O N N 40  
DC  "O5'"  O N N 41  
DC  "C5'"  C N N 42  
DC  "C4'"  C N R 43  
DC  "O4'"  O N N 44  
DC  "C3'"  C N S 45  
DC  "O3'"  O N N 46  
DC  "C2'"  C N N 47  
DC  "C1'"  C N R 48  
DC  N1     N N N 49  
DC  C2     C N N 50  
DC  O2     O N N 51  
DC  N3     N N N 52  
DC  C4     C N N 53  
DC  N4     N N N 54  
DC  C5     C N N 55  
DC  C6     C N N 56  
DC  HOP3   H N N 57  
DC  HOP2   H N N 58  
DC  "H5'"  H N N 59  
DC  "H5''" H N N 60  
DC  "H4'"  H N N 61  
DC  "H3'"  H N N 62  
DC  "HO3'" H N N 63  
DC  "H2'"  H N N 64  
DC  "H2''" H N N 65  
DC  "H1'"  H N N 66  
DC  H41    H N N 67  
DC  H42    H N N 68  
DC  H5     H N N 69  
DC  H6     H N N 70  
DG  OP3    O N N 71  
DG  P      P N N 72  
DG  OP1    O N N 73  
DG  OP2    O N N 74  
DG  "O5'"  O N N 75  
DG  "C5'"  C N N 76  
DG  "C4'"  C N R 77  
DG  "O4'"  O N N 78  
DG  "C3'"  C N S 79  
DG  "O3'"  O N N 80  
DG  "C2'"  C N N 81  
DG  "C1'"  C N R 82  
DG  N9     N Y N 83  
DG  C8     C Y N 84  
DG  N7     N Y N 85  
DG  C5     C Y N 86  
DG  C6     C N N 87  
DG  O6     O N N 88  
DG  N1     N N N 89  
DG  C2     C N N 90  
DG  N2     N N N 91  
DG  N3     N N N 92  
DG  C4     C Y N 93  
DG  HOP3   H N N 94  
DG  HOP2   H N N 95  
DG  "H5'"  H N N 96  
DG  "H5''" H N N 97  
DG  "H4'"  H N N 98  
DG  "H3'"  H N N 99  
DG  "HO3'" H N N 100 
DG  "H2'"  H N N 101 
DG  "H2''" H N N 102 
DG  "H1'"  H N N 103 
DG  H8     H N N 104 
DG  H1     H N N 105 
DG  H21    H N N 106 
DG  H22    H N N 107 
DT  OP3    O N N 108 
DT  P      P N N 109 
DT  OP1    O N N 110 
DT  OP2    O N N 111 
DT  "O5'"  O N N 112 
DT  "C5'"  C N N 113 
DT  "C4'"  C N R 114 
DT  "O4'"  O N N 115 
DT  "C3'"  C N S 116 
DT  "O3'"  O N N 117 
DT  "C2'"  C N N 118 
DT  "C1'"  C N R 119 
DT  N1     N N N 120 
DT  C2     C N N 121 
DT  O2     O N N 122 
DT  N3     N N N 123 
DT  C4     C N N 124 
DT  O4     O N N 125 
DT  C5     C N N 126 
DT  C7     C N N 127 
DT  C6     C N N 128 
DT  HOP3   H N N 129 
DT  HOP2   H N N 130 
DT  "H5'"  H N N 131 
DT  "H5''" H N N 132 
DT  "H4'"  H N N 133 
DT  "H3'"  H N N 134 
DT  "HO3'" H N N 135 
DT  "H2'"  H N N 136 
DT  "H2''" H N N 137 
DT  "H1'"  H N N 138 
DT  H3     H N N 139 
DT  H71    H N N 140 
DT  H72    H N N 141 
DT  H73    H N N 142 
DT  H6     H N N 143 
FAG C3A    C N N 144 
FAG C3     C N N 145 
FAG C2A    C N N 146 
FAG C1     C N N 147 
FAG O1     O N N 148 
FAG P      P N N 149 
FAG O1P    O N N 150 
FAG O2P    O N N 151 
FAG "O5'"  O N N 152 
FAG "C5'"  C N N 153 
FAG "C4'"  C N R 154 
FAG "O4'"  O N N 155 
FAG "C1'"  C N R 156 
FAG N9     N N N 157 
FAG C4     C N N 158 
FAG N3     N N N 159 
FAG C2     C N N 160 
FAG N2     N N N 161 
FAG N1     N N N 162 
FAG C6     C N N 163 
FAG O6     O N N 164 
FAG C5     C N N 165 
FAG N7     N N N 166 
FAG C8     C N N 167 
FAG O8     O N N 168 
FAG "C2'"  C N N 169 
FAG "C3'"  C N S 170 
FAG "O3'"  O N N 171 
FAG C8A    C N R 172 
FAG C9     C N R 173 
FAG O9     O N N 174 
FAG C9A    C N R 175 
FAG C9B    C Y N 176 
FAG O7     O N N 177 
FAG C6A    C N S 178 
FAG O6A    O N N 179 
FAG C5M    C Y N 180 
FAG C5B    C Y N 181 
FAG C4B    C Y N 182 
FAG O4     O N N 183 
FAG CM     C N N 184 
FAG C4A    C Y N 185 
FAG CAA    C Y N 186 
FAG O10    O N N 187 
FAG C11    C N N 188 
FAG O11    O N N 189 
FAG CBA    C N N 190 
FAG H31    H N N 191 
FAG H32    H N N 192 
FAG H2A1   H N N 193 
FAG H2A2   H N N 194 
FAG HOP2   H N N 195 
FAG "H5'1" H N N 196 
FAG "H5'2" H N N 197 
FAG "H4'"  H N N 198 
FAG "H1'"  H N N 199 
FAG HN9    H N N 200 
FAG HN21   H N N 201 
FAG HN22   H N N 202 
FAG H1     H N N 203 
FAG H8     H N N 204 
FAG "H2'1" H N N 205 
FAG "H2'2" H N N 206 
FAG "H3'"  H N N 207 
FAG "HO3'" H N N 208 
FAG H8A    H N N 209 
FAG H9     H N N 210 
FAG HO9    H N N 211 
FAG H9A    H N N 212 
FAG H6A    H N N 213 
FAG H5B    H N N 214 
FAG HM1    H N N 215 
FAG HM2    H N N 216 
FAG HM3    H N N 217 
FAG O3P    O N N 218 
FAG HOP3   H N N 219 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DA  OP3   P      sing N N 1   
DA  OP3   HOP3   sing N N 2   
DA  P     OP1    doub N N 3   
DA  P     OP2    sing N N 4   
DA  P     "O5'"  sing N N 5   
DA  OP2   HOP2   sing N N 6   
DA  "O5'" "C5'"  sing N N 7   
DA  "C5'" "C4'"  sing N N 8   
DA  "C5'" "H5'"  sing N N 9   
DA  "C5'" "H5''" sing N N 10  
DA  "C4'" "O4'"  sing N N 11  
DA  "C4'" "C3'"  sing N N 12  
DA  "C4'" "H4'"  sing N N 13  
DA  "O4'" "C1'"  sing N N 14  
DA  "C3'" "O3'"  sing N N 15  
DA  "C3'" "C2'"  sing N N 16  
DA  "C3'" "H3'"  sing N N 17  
DA  "O3'" "HO3'" sing N N 18  
DA  "C2'" "C1'"  sing N N 19  
DA  "C2'" "H2'"  sing N N 20  
DA  "C2'" "H2''" sing N N 21  
DA  "C1'" N9     sing N N 22  
DA  "C1'" "H1'"  sing N N 23  
DA  N9    C8     sing Y N 24  
DA  N9    C4     sing Y N 25  
DA  C8    N7     doub Y N 26  
DA  C8    H8     sing N N 27  
DA  N7    C5     sing Y N 28  
DA  C5    C6     sing Y N 29  
DA  C5    C4     doub Y N 30  
DA  C6    N6     sing N N 31  
DA  C6    N1     doub Y N 32  
DA  N6    H61    sing N N 33  
DA  N6    H62    sing N N 34  
DA  N1    C2     sing Y N 35  
DA  C2    N3     doub Y N 36  
DA  C2    H2     sing N N 37  
DA  N3    C4     sing Y N 38  
DC  OP3   P      sing N N 39  
DC  OP3   HOP3   sing N N 40  
DC  P     OP1    doub N N 41  
DC  P     OP2    sing N N 42  
DC  P     "O5'"  sing N N 43  
DC  OP2   HOP2   sing N N 44  
DC  "O5'" "C5'"  sing N N 45  
DC  "C5'" "C4'"  sing N N 46  
DC  "C5'" "H5'"  sing N N 47  
DC  "C5'" "H5''" sing N N 48  
DC  "C4'" "O4'"  sing N N 49  
DC  "C4'" "C3'"  sing N N 50  
DC  "C4'" "H4'"  sing N N 51  
DC  "O4'" "C1'"  sing N N 52  
DC  "C3'" "O3'"  sing N N 53  
DC  "C3'" "C2'"  sing N N 54  
DC  "C3'" "H3'"  sing N N 55  
DC  "O3'" "HO3'" sing N N 56  
DC  "C2'" "C1'"  sing N N 57  
DC  "C2'" "H2'"  sing N N 58  
DC  "C2'" "H2''" sing N N 59  
DC  "C1'" N1     sing N N 60  
DC  "C1'" "H1'"  sing N N 61  
DC  N1    C2     sing N N 62  
DC  N1    C6     sing N N 63  
DC  C2    O2     doub N N 64  
DC  C2    N3     sing N N 65  
DC  N3    C4     doub N N 66  
DC  C4    N4     sing N N 67  
DC  C4    C5     sing N N 68  
DC  N4    H41    sing N N 69  
DC  N4    H42    sing N N 70  
DC  C5    C6     doub N N 71  
DC  C5    H5     sing N N 72  
DC  C6    H6     sing N N 73  
DG  OP3   P      sing N N 74  
DG  OP3   HOP3   sing N N 75  
DG  P     OP1    doub N N 76  
DG  P     OP2    sing N N 77  
DG  P     "O5'"  sing N N 78  
DG  OP2   HOP2   sing N N 79  
DG  "O5'" "C5'"  sing N N 80  
DG  "C5'" "C4'"  sing N N 81  
DG  "C5'" "H5'"  sing N N 82  
DG  "C5'" "H5''" sing N N 83  
DG  "C4'" "O4'"  sing N N 84  
DG  "C4'" "C3'"  sing N N 85  
DG  "C4'" "H4'"  sing N N 86  
DG  "O4'" "C1'"  sing N N 87  
DG  "C3'" "O3'"  sing N N 88  
DG  "C3'" "C2'"  sing N N 89  
DG  "C3'" "H3'"  sing N N 90  
DG  "O3'" "HO3'" sing N N 91  
DG  "C2'" "C1'"  sing N N 92  
DG  "C2'" "H2'"  sing N N 93  
DG  "C2'" "H2''" sing N N 94  
DG  "C1'" N9     sing N N 95  
DG  "C1'" "H1'"  sing N N 96  
DG  N9    C8     sing Y N 97  
DG  N9    C4     sing Y N 98  
DG  C8    N7     doub Y N 99  
DG  C8    H8     sing N N 100 
DG  N7    C5     sing Y N 101 
DG  C5    C6     sing N N 102 
DG  C5    C4     doub Y N 103 
DG  C6    O6     doub N N 104 
DG  C6    N1     sing N N 105 
DG  N1    C2     sing N N 106 
DG  N1    H1     sing N N 107 
DG  C2    N2     sing N N 108 
DG  C2    N3     doub N N 109 
DG  N2    H21    sing N N 110 
DG  N2    H22    sing N N 111 
DG  N3    C4     sing N N 112 
DT  OP3   P      sing N N 113 
DT  OP3   HOP3   sing N N 114 
DT  P     OP1    doub N N 115 
DT  P     OP2    sing N N 116 
DT  P     "O5'"  sing N N 117 
DT  OP2   HOP2   sing N N 118 
DT  "O5'" "C5'"  sing N N 119 
DT  "C5'" "C4'"  sing N N 120 
DT  "C5'" "H5'"  sing N N 121 
DT  "C5'" "H5''" sing N N 122 
DT  "C4'" "O4'"  sing N N 123 
DT  "C4'" "C3'"  sing N N 124 
DT  "C4'" "H4'"  sing N N 125 
DT  "O4'" "C1'"  sing N N 126 
DT  "C3'" "O3'"  sing N N 127 
DT  "C3'" "C2'"  sing N N 128 
DT  "C3'" "H3'"  sing N N 129 
DT  "O3'" "HO3'" sing N N 130 
DT  "C2'" "C1'"  sing N N 131 
DT  "C2'" "H2'"  sing N N 132 
DT  "C2'" "H2''" sing N N 133 
DT  "C1'" N1     sing N N 134 
DT  "C1'" "H1'"  sing N N 135 
DT  N1    C2     sing N N 136 
DT  N1    C6     sing N N 137 
DT  C2    O2     doub N N 138 
DT  C2    N3     sing N N 139 
DT  N3    C4     sing N N 140 
DT  N3    H3     sing N N 141 
DT  C4    O4     doub N N 142 
DT  C4    C5     sing N N 143 
DT  C5    C7     sing N N 144 
DT  C5    C6     doub N N 145 
DT  C7    H71    sing N N 146 
DT  C7    H72    sing N N 147 
DT  C7    H73    sing N N 148 
DT  C6    H6     sing N N 149 
FAG C3A   C3     sing N N 150 
FAG C3A   C4A    sing N N 151 
FAG C3A   CBA    doub N N 152 
FAG C3    C2A    sing N N 153 
FAG C3    H31    sing N N 154 
FAG C3    H32    sing N N 155 
FAG C2A   C1     sing N N 156 
FAG C2A   H2A1   sing N N 157 
FAG C2A   H2A2   sing N N 158 
FAG C1    O1     doub N N 159 
FAG C1    CBA    sing N N 160 
FAG P     O1P    doub N N 161 
FAG P     O2P    sing N N 162 
FAG P     "O5'"  sing N N 163 
FAG O2P   HOP2   sing N N 164 
FAG "O5'" "C5'"  sing N N 165 
FAG "C5'" "C4'"  sing N N 166 
FAG "C5'" "H5'1" sing N N 167 
FAG "C5'" "H5'2" sing N N 168 
FAG "C4'" "O4'"  sing N N 169 
FAG "C4'" "C3'"  sing N N 170 
FAG "C4'" "H4'"  sing N N 171 
FAG "O4'" "C1'"  sing N N 172 
FAG "C1'" N9     sing N N 173 
FAG "C1'" "C2'"  sing N N 174 
FAG "C1'" "H1'"  sing N N 175 
FAG N9    C4     sing N N 176 
FAG N9    HN9    sing N N 177 
FAG C4    N3     sing N N 178 
FAG C4    C5     doub N N 179 
FAG N3    C2     doub N N 180 
FAG C2    N2     sing N N 181 
FAG C2    N1     sing N N 182 
FAG N2    HN21   sing N N 183 
FAG N2    HN22   sing N N 184 
FAG N1    C6     sing N N 185 
FAG N1    H1     sing N N 186 
FAG C6    O6     doub N N 187 
FAG C6    C5     sing N N 188 
FAG C5    N7     sing N N 189 
FAG N7    C8     sing N N 190 
FAG N7    C8A    sing N N 191 
FAG C8    O8     doub N N 192 
FAG C8    H8     sing N N 193 
FAG "C2'" "C3'"  sing N N 194 
FAG "C2'" "H2'1" sing N N 195 
FAG "C2'" "H2'2" sing N N 196 
FAG "C3'" "O3'"  sing N N 197 
FAG "C3'" "H3'"  sing N N 198 
FAG "O3'" "HO3'" sing N N 199 
FAG C8A   C9     sing N N 200 
FAG C8A   O7     sing N N 201 
FAG C8A   H8A    sing N N 202 
FAG C9    O9     sing N N 203 
FAG C9    C9A    sing N N 204 
FAG C9    H9     sing N N 205 
FAG O9    HO9    sing N N 206 
FAG C9A   C9B    sing N N 207 
FAG C9A   C6A    sing N N 208 
FAG C9A   H9A    sing N N 209 
FAG C9B   C5M    doub Y N 210 
FAG C9B   CAA    sing Y N 211 
FAG O7    C6A    sing N N 212 
FAG C6A   O6A    sing N N 213 
FAG C6A   H6A    sing N N 214 
FAG O6A   C5M    sing N N 215 
FAG C5M   C5B    sing Y N 216 
FAG C5B   C4B    doub Y N 217 
FAG C5B   H5B    sing N N 218 
FAG C4B   O4     sing N N 219 
FAG C4B   C4A    sing Y N 220 
FAG O4    CM     sing N N 221 
FAG CM    HM1    sing N N 222 
FAG CM    HM2    sing N N 223 
FAG CM    HM3    sing N N 224 
FAG C4A   CAA    doub Y N 225 
FAG CAA   O10    sing N N 226 
FAG O10   C11    sing N N 227 
FAG C11   O11    doub N N 228 
FAG C11   CBA    sing N N 229 
FAG P     O3P    sing N N 230 
FAG O3P   HOP3   sing N N 231 
# 
loop_
_ndb_struct_conf_na.entry_id 
_ndb_struct_conf_na.feature 
2MMF 'b-form double helix'  
2MMF 'mismatched base pair' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A DC 1  1_555 B DG 10 1_555 0.274  -0.064 0.397  -7.170 -19.280 -1.895  1 A_DC1:DG20_B  A 1  ? B 20 ? 19 1 
1 A DT 2  1_555 B DA 9  1_555 -0.130 0.005  0.315  -8.730 -10.867 -1.541  2 A_DT2:DA19_B  A 2  ? B 19 ? 20 1 
1 A DA 3  1_555 B DT 8  1_555 0.114  0.006  -0.021 -0.241 -3.413  -0.131  3 A_DA3:DT18_B  A 3  ? B 18 ? 20 1 
1 A DA 4  1_555 B DT 7  1_555 0.351  0.042  0.459  9.410  11.308  4.036   4 A_DA4:DT17_B  A 4  ? B 17 ? 20 1 
1 A DA 6  1_555 B DT 5  1_555 0.491  0.181  -0.091 -2.850 -7.107  -10.673 5 A_DA6:DT15_B  A 6  ? B 15 ? 20 1 
1 A DT 7  1_555 B DA 4  1_555 -0.169 0.036  -0.081 6.734  -6.746  -0.527  6 A_DT7:DA14_B  A 7  ? B 14 ? 20 1 
1 A DT 8  1_555 B DA 3  1_555 -0.146 -0.001 -0.204 0.999  -12.802 4.645   7 A_DT8:DA13_B  A 8  ? B 13 ? 20 1 
1 A DC 9  1_555 B DG 2  1_555 0.302  -0.062 0.191  -0.112 -1.270  -1.115  8 A_DC9:DG12_B  A 9  ? B 12 ? 19 1 
1 A DA 10 1_555 B DT 1  1_555 0.102  0.040  0.020  3.872  -13.181 0.109   9 A_DA10:DT11_B A 10 ? B 11 ? 20 1 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A DC 1 1_555 B DG 10 1_555 A DT 2  1_555 B DA 9 1_555 0.011  -0.507 3.299 2.170  2.774  32.877 -1.362 0.349  3.240 4.884  -3.820 
33.060 1 AA_DC1DT2:DA19DG20_BB  A 1 ? B 20 ? A 2  ? B 19 ? 
1 A DT 2 1_555 B DA 9  1_555 A DA 3  1_555 B DT 8 1_555 0.548  1.333  3.118 2.803  -1.330 47.962 1.736  -0.463 3.108 -1.634 -3.444 
48.056 2 AA_DT2DA3:DT18DA19_BB  A 2 ? B 19 ? A 3  ? B 18 ? 
1 A DA 3 1_555 B DT 8  1_555 A DA 4  1_555 B DT 7 1_555 0.502  0.548  3.293 -2.669 6.849  30.164 -0.319 -1.461 3.280 12.920 5.035  
31.027 3 AA_DA3DA4:DT17DT18_BB  A 3 ? B 18 ? A 4  ? B 17 ? 
1 A DA 6 1_555 B DT 5  1_555 A DT 7  1_555 B DA 4 1_555 0.750  -0.569 3.135 1.074  0.188  30.365 -1.121 -1.223 3.156 0.359  -2.049 
30.384 4 AA_DA6DT7:DA14DT15_BB  A 6 ? B 15 ? A 7  ? B 14 ? 
1 A DT 7 1_555 B DA 4  1_555 A DT 8  1_555 B DA 3 1_555 0.215  -0.722 3.426 1.423  -1.849 32.979 -0.940 -0.125 3.466 -3.252 -2.503 
33.060 5 AA_DT7DT8:DA13DA14_BB  A 7 ? B 14 ? A 8  ? B 13 ? 
1 A DT 8 1_555 B DA 3  1_555 A DC 9  1_555 B DG 2 1_555 -0.232 -0.930 3.453 -7.400 0.221  41.409 -1.321 -0.491 3.438 0.310  10.366 
42.037 6 AA_DT8DC9:DG12DA13_BB  A 8 ? B 13 ? A 9  ? B 12 ? 
1 A DC 9 1_555 B DG 2  1_555 A DA 10 1_555 B DT 1 1_555 0.094  -1.256 3.156 2.397  7.606  27.974 -4.034 0.295  2.725 15.344 -4.836 
29.067 7 AA_DC9DA10:DT11DG12_BB A 9 ? B 12 ? A 10 ? B 11 ? 
# 
loop_
_pdbx_nmr_spectrometer.field_strength 
_pdbx_nmr_spectrometer.manufacturer 
_pdbx_nmr_spectrometer.model 
_pdbx_nmr_spectrometer.spectrometer_id 
_pdbx_nmr_spectrometer.type 
800 Bruker AVANCE 1 'Bruker Avance' 
900 Bruker AVANCE 2 'Bruker Avance' 
# 
_atom_sites.entry_id                    2MMF 
_atom_sites.fract_transf_matrix[1][1]   1.000000 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   1.000000 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   1.000000 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C 
H 
N 
O 
P 
# 
loop_