HEADER DE NOVO PROTEIN 28-MAR-14 2MN4 TITLE NMR SOLUTION STRUCTURE OF A COMPUTATIONAL DESIGNED PROTEIN BASED ON TITLE 2 STRUCTURE TEMPLATE 1CY5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: COMPUTATIONAL DESIGNED PROTEIN BASED ON STRUCTURE TEMPLATE COMPND 3 1CY5; COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: PET28 KEYWDS PROTEIN DESIGN, STATISTICAL ENERGY FUNCTION, ALPHA-HELICAL GREEK, KEYWDS 2 PROTEIN EVOLUTION, DE NOVO PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR P.XIONG,M.WANG,J.ZHANG,Q.CHEN,H.LIU REVDAT 3 14-JUN-23 2MN4 1 REMARK REVDAT 2 21-SEP-16 2MN4 1 JRNL REVDAT 1 29-OCT-14 2MN4 0 JRNL AUTH P.XIONG,M.WANG,X.ZHOU,T.ZHANG,J.ZHANG,Q.CHEN,H.LIU JRNL TITL PROTEIN DESIGN WITH A COMPREHENSIVE STATISTICAL ENERGY JRNL TITL 2 FUNCTION AND BOOSTED BY EXPERIMENTAL SELECTION FOR JRNL TITL 3 FOLDABILITY JRNL REF NAT COMMUN V. 5 5330 2014 JRNL REFN ESSN 2041-1723 JRNL PMID 25345468 JRNL DOI 10.1038/NCOMMS6330 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.3, CNS 1.3 REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 (CNS), BRUNGER, ADAMS, CLORE, GROS, NILGES AND REMARK 3 READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MN4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-APR-14. REMARK 100 THE DEPOSITION ID IS D_1000103813. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 125 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5-1 MM [U-100% 13C; U-100% REMARK 210 15N] PROTEIN-1, 25 MM PHOSPHATE REMARK 210 BUFFER-2, 100 MM SODIUM CHLORIDE- REMARK 210 3, 2 MM EDTA-4, 90% H2O/10% D2O; REMARK 210 0.5-1 MM [U-100% 13C; U-100% 15N] REMARK 210 PROTEIN-5, 25 MM PHOSPHATE REMARK 210 BUFFER-6, 100 MM SODIUM CHLORIDE- REMARK 210 7, 2 MM EDTA-8, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D CBCA(CO)NH; REMARK 210 3D C(CO)NH; 3D HBHA(CO)NH; 3D REMARK 210 H(CCO)NH; 3D HCCH-TOCSY; 3D HCCH- REMARK 210 COSY; 3D 1H-15N NOESY; 3D 1H-13C REMARK 210 NOESY; 3D HNCACB REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 1000 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 HIS A 95 REMARK 465 HIS A 96 REMARK 465 HIS A 97 REMARK 465 HIS A 98 REMARK 465 HIS A 99 REMARK 465 HIS A 100 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 TYR A 80 48.43 -98.69 REMARK 500 2 TYR A 80 41.81 -96.01 REMARK 500 3 TYR A 80 43.49 -96.80 REMARK 500 4 TYR A 80 47.90 -98.11 REMARK 500 5 TYR A 80 42.39 -97.51 REMARK 500 6 TYR A 80 45.97 -96.34 REMARK 500 7 TYR A 80 46.95 -98.41 REMARK 500 8 TYR A 80 50.29 -95.72 REMARK 500 9 TYR A 80 43.13 -102.12 REMARK 500 10 TYR A 80 47.62 -97.60 REMARK 500 11 TYR A 80 45.80 -99.40 REMARK 500 12 TYR A 80 48.25 -98.83 REMARK 500 13 TYR A 80 47.01 -95.86 REMARK 500 14 TYR A 80 45.29 -97.88 REMARK 500 15 TYR A 80 51.68 -98.44 REMARK 500 16 TYR A 80 50.03 -98.66 REMARK 500 17 TYR A 80 46.14 -95.98 REMARK 500 18 TYR A 80 47.82 -98.07 REMARK 500 19 TYR A 80 44.34 -96.28 REMARK 500 20 TYR A 80 46.81 -101.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 19879 RELATED DB: BMRB REMARK 900 RELATED ID: 2MLB RELATED DB: PDB DBREF 2MN4 A -5 100 PDB 2MN4 2MN4 -5 100 SEQRES 1 A 106 HIS HIS HIS HIS HIS HIS MET THR PRO GLU GLN ARG GLU SEQRES 2 A 106 PHE LEU PRO GLU ILE LEU ALA GLU ILE ILE ALA ASN LEU SEQRES 3 A 106 ASP PRO THR LYS ILE LEU GLU GLU LEU LEU ARG ARG GLY SEQRES 4 A 106 LEU LEU THR PRO ALA GLU LEU GLN GLU VAL LEU ASP LEU SEQRES 5 A 106 LYS THR PRO GLU GLU GLN ALA LYS LYS LEU ILE ASP PHE SEQRES 6 A 106 ILE LEU LYS LEU SER PRO ALA ASP VAL GLN ALA ARG ILE SEQRES 7 A 106 ASN VAL LEU ARG ALA HIS GLY TYR GLN ALA LEU ALA ASP SEQRES 8 A 106 LYS LEU ASN LYS TYR LEU THR LEU GLU HIS HIS HIS HIS SEQRES 9 A 106 HIS HIS HELIX 1 1 THR A 2 GLU A 7 1 6 HELIX 2 2 PHE A 8 ALA A 18 1 11 HELIX 3 3 ASP A 21 GLY A 33 1 13 HELIX 4 4 THR A 36 LEU A 46 1 11 HELIX 5 5 THR A 48 LYS A 62 1 15 HELIX 6 6 SER A 64 HIS A 78 1 15 HELIX 7 7 TYR A 80 THR A 92 1 13 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1